KEGG   Polypterus senegalus (gray bichir): 120533000
Entry
120533000         CDS       T08668                                 
Symbol
tpm2
Name
(RefSeq) tropomyosin beta chain isoform X1
  KO
K10374  tropomyosin 2
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04260  Cardiac muscle contraction
psex04261  Adrenergic signaling in cardiomyocytes
psex04814  Motor proteins
psex04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:psex00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    120533000 (tpm2)
   04820 Cytoskeleton in muscle cells
    120533000 (tpm2)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    120533000 (tpm2)
   04261 Adrenergic signaling in cardiomyocytes
    120533000 (tpm2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psex04812]
    120533000 (tpm2)
Cytoskeleton proteins [BR:psex04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     120533000 (tpm2)
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ ATG16 ERM_helical Nuf2_DHR10-like Crescentin PUMA_CC Laminin_I CENP-F_leu_zip XhlA DUF3450 Fib_alpha DUF4200 FPP Alanine_zipper HR1 NPV_P10 Golgin_A5 SlyX Cnn_1N DUF16 DUF745 GAS DUF1664 MscS_porin TMP_N
Other DBs
NCBI-GeneID: 120533000
NCBI-ProteinID: XP_039615512
LinkDB
Position
7:168131561..168250079
AA seq 284 aa
MDAIKKKMQMLKLDKENAIDRAEQAEGDKKASEDKVKQLEEELQGLQKKLKGTEDELDKY
SESLKDAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSE
ERAEVAEAKSADLEEELKNVANNLKSLEAQSDKYSQKEDKYEEEIKLLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDEVYSQKLKCKAISEELDNALNDMTSL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggatgccatcaaaaagaaaatgcagatgctaaaactggacaaggaaaacgccatcgac
agagctgagcaagccgaaggagataaaaaggcgtctgaggataaagtcaaacagttggag
gaagagctccagggcctacagaagaaacttaaaggaactgaagatgagctagacaagtac
tctgaatcgctgaaagatgcccaggagaaactggagcaggcagagaagaaagccactgat
gcagaagctgaagtggcctctctgaaccggcgtatacaactggtagaagaagagttggac
cgagctcaggaacgccttgccactgccttgcagaagcttgaggaagctgaaaaggccgct
gatgaaagtgagagaggtatgaaggtgattgaaaacagagcaatgaaggatgaagaaaaa
atggagattcaggagatgcaactgaaggaagccaagcatattgcagaagaggcagaccga
aaatacgaagaggtggcccgcaagcttgttattctggaaggtgaactggaaagatcggag
gagcgtgctgaggttgcagaagctaaatctgctgatcttgaggaagagttgaaaaatgtc
gccaacaacttgaagtctctggaagctcagtctgacaagtattcgcaaaaggaagacaaa
tatgaagaagaaataaaacttctaacagataagcttaaagaagctgaaacccgtgctgag
tttgctgaacgatctgtagcaaaacttgaaaaaaccattgatgacttggaagatgaggtg
tattctcagaagctgaaatgtaaggccatcagtgaggagctggacaatgctttgaacgac
atgacatcactctga

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