KEGG   Polypterus senegalus (gray bichir): 120533064
Entry
120533064         CDS       T08668                                 
Name
(RefSeq) RNA exonuclease 1 homolog
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    120533064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psex03009]
    120533064
Ribosome biogenesis [BR:psex03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    120533064
SSDB
Motif
Pfam: EloA-BP1 RNase_T KIX_2
Other DBs
NCBI-GeneID: 120533064
NCBI-ProteinID: XP_039615635
LinkDB
Position
7:184443153..184473029
AA seq 1032 aa
MLPSSTLFIRIDCPFFKRGRCERPYCHYKHDHEAERALDHVAPLGNVEMEKTKVRTLKST
PRNQSTPQELQVKAADLSELEKINKAIEMVKSEVEQEQKKLSRYKTIKRKSSFVASPTLE
DYAEVKVHVIEAEGKKIGQCRNEKISTVATKTKYVVDKSKPATDLEYDPLSNYSADLGYS
SGKQCDLEIKGVKRVKKDEVKGKAISKCKVSKQEMEGEDSDTLIIDIPPLNEKRSHAPKR
RKNGDCDAGLHGTTEQKGLSPSLCVESKAVPKSSFLPIISKEESECQLLEKLDVEEFFEW
SETESCVVDSLLGSSAESMTGSFGEDPNVAGCGTLVTTPSNAAFRTTNKSLSLKAKSEKV
TGETEKRVMKDELEMEVSLLTEESLGLPVQEEAWFDETSALECTSTSSDQRDSPSVETEQ
NGKSDSESEANDSDMELDLSDTDPMEECYRIFMESSEMKLEDNALNQETNAHAENEFNAD
QRELERKETLLPGQKKRVAHVSKYNVKSNRQQIIVPFRGPMSHVGNPTRIQQLQHKATVL
TAAVKGGQAFIAASNNQRKIVASPHPPVLPNTGQIVCLNMVQVPALAVSPWGANMQVVIP
ESTVTNGLTSVPATPSAHRTTFTPAKAVSSRRKTKAVVSTSKVPHDVRQRYVNCFVEEFL
KTSSTVQEAFEKALNEEKAVFDRSSNKMKYLSIAVNALKKIKNQTSCLSEDLQMSRGETS
VGDAGGFIDSTWTSFYEQLKEHVLSWEMLRDGGFPVQHPEKPGNAICCKEPKKTVHDAFK
RICCRCGATYSVTTCGKHVRKEECTYHSGRVLKRKVPGGIDCRYSCCEGAVGTPGCETFQ
FHVHDGQRDNVGGFVKTFSKPVPNNGNPGVFAVDCEMCYTTQGLELARVTVVNPGLQVVY
DTFVKTDNEVLDYNTRFSGVTEEDLKQASSTIRDVQAVLLNLFSAETILIGHSFENDLFA
LKLLHSTVVDTSIVFPHRLGLPNKRALRTLMAEYLRRIIQENVGGHDSSEDATACMELML
WKVKEDTKGKRW
NT seq 3099 nt   +upstreamnt  +downstreamnt
atgttaccttcatctacgctgttcattcgtatagactgcccctttttcaaacgaggaagg
tgcgaacggccatactgtcactacaaacacgaccatgaagcagagcgcgcgctggatcac
gtggcacctctggggaatgtggagatggaaaagaccaaggtgaggaccttgaagagtaca
cccagaaatcaaagtacgccacaggagttgcaagtcaaagcagctgacctttctgaactg
gagaaaatcaataaagcaattgagatggtaaaatctgaagttgaacaagaacagaagaaa
ttgtctcgctataaaaccataaaaagaaaaagctcctttgtcgcttcccctacactagaa
gattatgcagaagtaaaggttcacgtcattgaagcagaaggaaagaaaataggtcagtgt
agaaatgaaaagatctcgactgtagccacaaaaacgaaatatgtggtagataaatccaaa
ccggcgacagacctagaatatgatccattgtctaattattctgctgatcttgggtacagc
agtggaaagcagtgtgacttggagatcaagggtgttaaaagggttaagaaggatgaggta
aaaggaaaggccatttctaaatgtaaggtatccaagcaagaaatggaaggtgaagactct
gatacactcattattgatatcccgccattgaatgagaagcgttcccatgcccctaaaaga
cgtaaaaatggagattgtgatgctggacttcatggtaccactgaacaaaaaggattatcc
ccttcattatgcgtagaaagtaaagccgttccaaaatctagtttccttcctataatttct
aaggaggaaagtgaatgccagttgttggaaaagcttgatgttgaagaattctttgaatgg
agtgaaaccgaatcttgtgttgtcgatagtttactaggttcatctgcagaaagtatgact
ggctcttttggagaagacccaaatgtagctggatgtgggacactagtcacaactccaagc
aatgctgcatttcggaccactaataagagtttatcactaaaagcgaaatctgagaaagta
actggcgaaactgaaaagagagttatgaaggatgagcttgaaatggaagtgagcttgcta
acggaggaaagtcttggcttgcctgttcaagaagaagcatggtttgatgaaacatctgca
ttggaatgcacgagtacctcctctgaccagcgggatagccctagtgtcgaaactgagcaa
aatggtaagagtgattcagaatctgaagcaaacgactctgatatggagcttgatttgtcc
gatactgacccaatggaggaatgttaccgaatttttatggagtccagtgagatgaaactg
gaagataatgcgttgaaccaggaaacaaatgcccatgctgaaaatgaatttaatgcagat
caaagagaattggagagaaaagagactttactcccagggcagaagaaaagggttgcacat
gtgtcaaagtataatgtcaaatcaaacagacaacagataattgtgccattcaggggaccc
atgtcccatgtgggtaatcctacacgcatccagcagttacagcataaggctacggttctc
actgctgcagtgaaaggtggccaggcatttattgctgctagtaataatcaacgaaaaatt
gttgctagtcctcaccctcctgtgctgccaaatacgggacaaattgtttgtttaaatatg
gttcaagttcctgcattggccgtttctccatggggtgccaacatgcaagttgtcatacca
gagagcaccgttactaatggattaacaagtgtccctgccacaccgtctgcgcacagaaca
accttcacccctgccaaggcagtctccagtcgtaggaaaacgaaagctgttgtgagcact
tcaaaggttccacatgacgtgagacagcgttatgttaattgttttgttgaagagtttctt
aaaacctcctcgactgtccaggaggcttttgaaaaggcactgaacgaagaaaaagccgtg
tttgaccgtagcagcaacaagatgaaatatttgagtattgctgtgaatgcccttaagaag
attaagaaccaaaccagctgcttatctgaagacctacagatgtccagaggtgaaacatct
gttggtgatgcaggaggatttatcgactctacttggacatcattttatgaacagttaaaa
gaacatgtcctatcctgggaaatgttaagagatggtggctttcctgttcagcatcctgaa
aagccagggaatgcaatatgttgcaaagaacctaagaagactgttcatgacgcctttaaa
agaatatgttgccggtgtggagcaacctattctgtgaccacatgtggaaagcatgttcga
aaggaagagtgcacctaccattctggcagagtccttaagagaaaagtacccggtggcata
gactgtcgttacagctgctgtgaaggagcagtgggaacccctggctgcgagacctttcag
ttccatgtacatgatggtcagagggacaacgttggaggctttgtgaagactttttccaag
ccagttcctaataatgggaaccctggtgtttttgcagttgattgtgaaatgtgctatacc
actcaaggtcttgaacttgcaagagttacagttgtaaaccctgggcttcaagttgtatat
gatacttttgtgaaaactgataatgaagtccttgactacaacaccagattttctggagtc
actgaggaagacttgaagcaagcctcttcaacaatccgtgacgttcaggctgtactactg
aatctgttcagtgctgaaacaatcttaataggtcatagttttgaaaatgatctatttgca
cttaagctccttcacagcactgttgttgacacttctattgtatttccacatcggttgggc
ctaccaaataaaagagcacttaggacacttatggcagaataccttagacgaatcatacaa
gaaaatgtgggaggtcacgactccagtgaagatgctacagcttgtatggagctgatgctt
tggaaagtaaaagaagacacaaaaggaaagcgctggtga

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