Polypterus senegalus (gray bichir): 120533064
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Entry
120533064 CDS
T08668
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120533064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120533064
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
Pre-60S particles
RNases
120533064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
KIX_2
Motif
Other DBs
NCBI-GeneID:
120533064
NCBI-ProteinID:
XP_039615635
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All DBs
Position
7:184443153..184473029
Genome browser
AA seq
1032 aa
AA seq
DB search
MLPSSTLFIRIDCPFFKRGRCERPYCHYKHDHEAERALDHVAPLGNVEMEKTKVRTLKST
PRNQSTPQELQVKAADLSELEKINKAIEMVKSEVEQEQKKLSRYKTIKRKSSFVASPTLE
DYAEVKVHVIEAEGKKIGQCRNEKISTVATKTKYVVDKSKPATDLEYDPLSNYSADLGYS
SGKQCDLEIKGVKRVKKDEVKGKAISKCKVSKQEMEGEDSDTLIIDIPPLNEKRSHAPKR
RKNGDCDAGLHGTTEQKGLSPSLCVESKAVPKSSFLPIISKEESECQLLEKLDVEEFFEW
SETESCVVDSLLGSSAESMTGSFGEDPNVAGCGTLVTTPSNAAFRTTNKSLSLKAKSEKV
TGETEKRVMKDELEMEVSLLTEESLGLPVQEEAWFDETSALECTSTSSDQRDSPSVETEQ
NGKSDSESEANDSDMELDLSDTDPMEECYRIFMESSEMKLEDNALNQETNAHAENEFNAD
QRELERKETLLPGQKKRVAHVSKYNVKSNRQQIIVPFRGPMSHVGNPTRIQQLQHKATVL
TAAVKGGQAFIAASNNQRKIVASPHPPVLPNTGQIVCLNMVQVPALAVSPWGANMQVVIP
ESTVTNGLTSVPATPSAHRTTFTPAKAVSSRRKTKAVVSTSKVPHDVRQRYVNCFVEEFL
KTSSTVQEAFEKALNEEKAVFDRSSNKMKYLSIAVNALKKIKNQTSCLSEDLQMSRGETS
VGDAGGFIDSTWTSFYEQLKEHVLSWEMLRDGGFPVQHPEKPGNAICCKEPKKTVHDAFK
RICCRCGATYSVTTCGKHVRKEECTYHSGRVLKRKVPGGIDCRYSCCEGAVGTPGCETFQ
FHVHDGQRDNVGGFVKTFSKPVPNNGNPGVFAVDCEMCYTTQGLELARVTVVNPGLQVVY
DTFVKTDNEVLDYNTRFSGVTEEDLKQASSTIRDVQAVLLNLFSAETILIGHSFENDLFA
LKLLHSTVVDTSIVFPHRLGLPNKRALRTLMAEYLRRIIQENVGGHDSSEDATACMELML
WKVKEDTKGKRW
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgttaccttcatctacgctgttcattcgtatagactgcccctttttcaaacgaggaagg
tgcgaacggccatactgtcactacaaacacgaccatgaagcagagcgcgcgctggatcac
gtggcacctctggggaatgtggagatggaaaagaccaaggtgaggaccttgaagagtaca
cccagaaatcaaagtacgccacaggagttgcaagtcaaagcagctgacctttctgaactg
gagaaaatcaataaagcaattgagatggtaaaatctgaagttgaacaagaacagaagaaa
ttgtctcgctataaaaccataaaaagaaaaagctcctttgtcgcttcccctacactagaa
gattatgcagaagtaaaggttcacgtcattgaagcagaaggaaagaaaataggtcagtgt
agaaatgaaaagatctcgactgtagccacaaaaacgaaatatgtggtagataaatccaaa
ccggcgacagacctagaatatgatccattgtctaattattctgctgatcttgggtacagc
agtggaaagcagtgtgacttggagatcaagggtgttaaaagggttaagaaggatgaggta
aaaggaaaggccatttctaaatgtaaggtatccaagcaagaaatggaaggtgaagactct
gatacactcattattgatatcccgccattgaatgagaagcgttcccatgcccctaaaaga
cgtaaaaatggagattgtgatgctggacttcatggtaccactgaacaaaaaggattatcc
ccttcattatgcgtagaaagtaaagccgttccaaaatctagtttccttcctataatttct
aaggaggaaagtgaatgccagttgttggaaaagcttgatgttgaagaattctttgaatgg
agtgaaaccgaatcttgtgttgtcgatagtttactaggttcatctgcagaaagtatgact
ggctcttttggagaagacccaaatgtagctggatgtgggacactagtcacaactccaagc
aatgctgcatttcggaccactaataagagtttatcactaaaagcgaaatctgagaaagta
actggcgaaactgaaaagagagttatgaaggatgagcttgaaatggaagtgagcttgcta
acggaggaaagtcttggcttgcctgttcaagaagaagcatggtttgatgaaacatctgca
ttggaatgcacgagtacctcctctgaccagcgggatagccctagtgtcgaaactgagcaa
aatggtaagagtgattcagaatctgaagcaaacgactctgatatggagcttgatttgtcc
gatactgacccaatggaggaatgttaccgaatttttatggagtccagtgagatgaaactg
gaagataatgcgttgaaccaggaaacaaatgcccatgctgaaaatgaatttaatgcagat
caaagagaattggagagaaaagagactttactcccagggcagaagaaaagggttgcacat
gtgtcaaagtataatgtcaaatcaaacagacaacagataattgtgccattcaggggaccc
atgtcccatgtgggtaatcctacacgcatccagcagttacagcataaggctacggttctc
actgctgcagtgaaaggtggccaggcatttattgctgctagtaataatcaacgaaaaatt
gttgctagtcctcaccctcctgtgctgccaaatacgggacaaattgtttgtttaaatatg
gttcaagttcctgcattggccgtttctccatggggtgccaacatgcaagttgtcatacca
gagagcaccgttactaatggattaacaagtgtccctgccacaccgtctgcgcacagaaca
accttcacccctgccaaggcagtctccagtcgtaggaaaacgaaagctgttgtgagcact
tcaaaggttccacatgacgtgagacagcgttatgttaattgttttgttgaagagtttctt
aaaacctcctcgactgtccaggaggcttttgaaaaggcactgaacgaagaaaaagccgtg
tttgaccgtagcagcaacaagatgaaatatttgagtattgctgtgaatgcccttaagaag
attaagaaccaaaccagctgcttatctgaagacctacagatgtccagaggtgaaacatct
gttggtgatgcaggaggatttatcgactctacttggacatcattttatgaacagttaaaa
gaacatgtcctatcctgggaaatgttaagagatggtggctttcctgttcagcatcctgaa
aagccagggaatgcaatatgttgcaaagaacctaagaagactgttcatgacgcctttaaa
agaatatgttgccggtgtggagcaacctattctgtgaccacatgtggaaagcatgttcga
aaggaagagtgcacctaccattctggcagagtccttaagagaaaagtacccggtggcata
gactgtcgttacagctgctgtgaaggagcagtgggaacccctggctgcgagacctttcag
ttccatgtacatgatggtcagagggacaacgttggaggctttgtgaagactttttccaag
ccagttcctaataatgggaaccctggtgtttttgcagttgattgtgaaatgtgctatacc
actcaaggtcttgaacttgcaagagttacagttgtaaaccctgggcttcaagttgtatat
gatacttttgtgaaaactgataatgaagtccttgactacaacaccagattttctggagtc
actgaggaagacttgaagcaagcctcttcaacaatccgtgacgttcaggctgtactactg
aatctgttcagtgctgaaacaatcttaataggtcatagttttgaaaatgatctatttgca
cttaagctccttcacagcactgttgttgacacttctattgtatttccacatcggttgggc
ctaccaaataaaagagcacttaggacacttatggcagaataccttagacgaatcatacaa
gaaaatgtgggaggtcacgactccagtgaagatgctacagcttgtatggagctgatgctt
tggaaagtaaaagaagacacaaaaggaaagcgctggtga
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