Polypterus senegalus (gray bichir): 120533073
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Entry
120533073 CDS
T08668
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03420
Nucleotide excision repair
psex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120533073 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
120533073 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
psex03051
]
120533073 (rad23b)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120533073 (rad23b)
Proteasome [BR:
psex03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
120533073 (rad23b)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
120533073 (rad23b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
UBA_3
Dsc3_N
CUE
Ubiquitin_5
DUF1421
UBA_2
UBA_9
DUF3306
Motif
Other DBs
NCBI-GeneID:
120533073
NCBI-ProteinID:
XP_039615653
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Position
7:complement(185635866..185704532)
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AA seq
377 aa
AA seq
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MQITLKTLQQQTFKIEIDGEETVKALKEKIETEKGKDGFPVAGLKLIYAGKILNDDTALK
EYKIDEKNFVVVMVTKPKPAQPAQTAPATSSTSVSTPAPAASADPAPSETKSSSTAKEEK
STEKAEEKPATSTPPSSVSTSSPTNVNIFEEATSALVTGQSYENMVTEIMSMGYEREQVV
AALRASFNNPDRAVEYLLTGIPVERESHSVADPIAQSGSTPSGASTGSLSSSSTGSSQPA
APVSSTGVNPLEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISSHQEQFI
QMLNEPAQEAGGQGAGALEAGGGQMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEK
NENLAANFLLQQNFDDD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgttgaaaacgcttcagcagcagacctttaaaatcgagatagacggggag
gagacggtaaaagcactgaaagaaaaaatcgaaacagaaaaaggaaaagatggctttcct
gttgcaggactaaaattgatatatgcaggtaaaattcttaatgatgacactgctctcaag
gaatataaaattgatgaaaaaaactttgtggtggttatggtaacaaagccaaaaccagca
caaccagctcagactgctcctgccaccagcagtaccagtgtttcaacgcctgccccagct
gcatctgctgacccagcaccttctgagacaaaatctagtagcactgcaaaagaggaaaaa
agtactgagaaagcggaggagaaaccagctacctctacaccaccttcatcagtcagtaca
tcaagtcctacaaatgtaaacatatttgaagaggctacatctgcactcgtgacagggcag
tcctatgaaaatatggtgacagagatcatgtcaatgggatatgaaagagagcaagttgtt
gcagcactaagagcgagctttaacaatcctgacagggcagttgaatatctcctaacgggt
attccagtcgaaagagagagtcattctgtagcagatcctattgcacaatctggtagcact
ccaagtggtgcaagtacagggtctttgtcatcctcatccacgggatcttcgcagccagct
gcaccagtatcctctacaggtgtgaatcctttggagttcttaaggaatcagcctcagttc
cagcaaatgcggcaaatcattcaacaaaatccatctctgcttccagccttattacaacag
ataggcagagaaaatcctcagttgttgcagcaaatcagcagtcaccaagaacaatttatt
cagatgctaaatgagccagctcaagaagctggaggacaaggtgcaggagctttagaagct
ggtggtggacagatgaactacattcaagtaacacctcaggaaaaagaagcaattgaaagg
cttaaagcattaggattcccagaaggacttgttattcaggcttactttgcctgtgagaag
aatgaaaacttagcagcaaacttccttttacagcagaactttgatgatgattaa
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