Polypterus senegalus (gray bichir): 120533090 Help Entry 120533090         CDS       T08668                                  Name (RefSeq) collagen alpha-5(IV) chain-like   KO K06237   collagen type IV alpha Organism psex  Polypterus senegalus (gray bichir) Pathway psex04382   Cornified envelope formation psex04510   Focal adhesion psex04512   ECM-receptor interaction psex04518   Integrin signaling psex04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:psex00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     120533090    04518 Integrin signaling     120533090  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120533090   09142 Cell motility    04820 Cytoskeleton in muscle cells     120533090  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     120533090  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:psex04147]     120533090    00536 Glycosaminoglycan binding proteins [BR:psex00536]     120533090 Exosome [BR:psex04147]  Exosomal proteins   Exosomal proteins of other cancer cells    120533090 Glycosaminoglycan binding proteins [BR:psex00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    120533090 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  120533090 NCBI-ProteinID:  XP_039615697 LinkDB All DBs Position 1:145071714..145296329 Genome browser AA seq 1655 aa AA seqDB search MLRAWVIFLLLVVLFSRNFDTAKAENDCTCTGKSRCHCEGIKGSMGEKGFPGLVGVPGQV GFLGKEGLPGPVGTKGDPGFTGAPGLKGSRGPTGPPGILGLPGIPGIPGTDGPVGPRGIP GCDGVKGEEGYPGLPGKPGCPGEPGLNGIPGMKGESPATVRICQPQPGDSGVPGLMGTKG QPGTWGQPGPTGDPGPQGFPGPQGSPGFPGPKGIEGISHRDPGPPGPKGDRGIPGIPGER GVKLFASSPGLCQGDQGDKGDKGFPGPPGVIPPYYKGVAGDQGEPGGEGKPGKDGIPGEQ GIQGDKGQPGDTGPPGIPASKGLKGDTGLVGPPGRKIMLDSKVKGKQGPPGQQGSSGQPG RPGLKGMPGPPGKAGNSIIGSPGLPGPPGFRGPKGDTGDPGITLYGIPGKTGPTGLPGSQ GPRGPPGPPGPIKEIEGPPGFPGIEGIIGLPGMKGFSGPRGDKGENKQCVPKKGAIGPPG VRGNSGSEGPLGPKGFKGPEGTPGPPGPRGQPGFPGREGLQGSRGESPYMDQKGSKGEKG NNGFLGNPGRKGSDGKDGRPGPPGPSGEKGERGPMGCIGDLGAPGNPGFSGPPGQVGVRG LVGYGLPGPDGSKGNQGVPGLPGIPGAVGEKGTKGYMVYVPGIAGSEGEPGLPGERGLQG KPGVDGLPGSFGSIGSKGERGISSLGFPGPVGLKGDKGVMGPVGPNSAPGLPGRPGPNGT PGSPGPKGNIGYGNPGIEGRPGPPGEIGNMGPCGNPGFQGPPGKTGEPGANGDPGQKGDI GPSGLSGPQGCPGNCEPGAAGIAGFPGVKGSIGLKGGTGLNGQKGESGNPGIDIIGLPGV IGDRGSEGQPGQSGAVGFKGLKGFAGLQGAPGERGEQGMMGLPGSVGPPGPPGIPGLSGP QGLVASDGSKGDKGSKGQKGEKGRQGPVGLKIDAHIKGVKGSSGLSGCHGSGGEKGDRGY PGKPGARGAKGTPGKEGPQGPLGDPGLPGNTGVPGFPGEPGSSGEMGIPGYKGEKGEAGS IGAPGHAGLQGITGTKGDKGEQGPHGCSIPGPPGLKGNRGIPGIEGAIGDRGSPGQSGIP GLPGLPGLRGEDGIPGRPGVPGEPGPKGNDGLTGPPGPPGPNGLRGIPGEPAMPGARGEK GTQGTDGFPGRIGEKGEPGLPGRLPGDLGAPGLKGIKGDLGPPGSCGVPGHPGPIGDRGP TGIQGIVGEPGPPGRPGMQIEGQKGDIGLPGLPGVNGLRGPEGPPGKVEPSIKGNKGNKG AEGARGLQGMMGDTGPAGHPGLPGLPGSKGENGEPGEPGFPGEAGMKGDSGRPGFRGSQG MKGLKGIQGPPGKDTYVECKSEPGDIGLPGVQGILGIMGLQGTPGLNGPKGLPGPKGVPG RVGPPGFIGHPGPKGNRGILGVKGPPGLIGLTGLRGQDGPPGLSLPSGQMQGFIFTRHSQ TRDIPLCPVGTQQILIGYSLLYIKGNDRAHGQDLGSLGSCLPRFSTMPFLLCTPDNICNY ASRNDYSYWLSTEEPMPASMTAVSGAPLQPYIGRCVVCEGTANIITVHSQTTQLPNCPVG WSSLWLGYSFIMHRGAGAEGSGQALASPGSCLEEFRHTPFIECHTKGTCNNFADSYSYWL AALNSSDIFRKPQSKTLKTGALENIISRCRVCMKQ NT seq 4968 nt NT seq  +upstreamnt  +downstreamnt atgttgcgcgcttgggttattttccttttactggttgtcttgttcagcaggaatttcgat actgctaaagcggaaaacgactgtacatgcacaggtaaatcccgttgtcactgtgaagga atcaagggaagcatgggagagaaaggatttcctggtctggttggtgtgcctggtcaagtt ggctttcttggtaaagaaggtctaccagggccagtgggcactaagggagatcctggattc actggagcaccaggactaaaaggttcaaggggtccaactggtccacctggcattttaggt cttccagggattccaggtattcctggaacagatggtcctgttggccctaggggaattcct ggatgtgatggagtgaagggtgaagaaggctacccaggattaccaggaaaacctggctgc ccaggtgaaccaggtcttaatggcattcctggtatgaagggtgaatctcctgctacagta aggatctgtcagccgcagccaggtgatagtggagtgccaggactgatggggactaagggt caaccaggaacttggggacagcctggtcctactggtgaccctggaccacaaggttttcct ggtccacaagggagtcctggttttcctggaccaaagggaattgagggaataagccacaga gatccaggccccccaggaccaaagggtgacagggggattccaggtataccaggtgaaaga ggagtgaagctctttgcatcttcacctggactttgtcagggagatcaaggtgataaaggg gataaaggctttccaggtcctcctggtgtcattccaccatattacaagggtgtggcagga gatcagggagaacctggaggagagggaaaacctggaaaagatggcatacctggtgaacaa ggaattcagggagacaaaggacaacccggtgacactggacctccaggaattcctgcatcc aaagggctaaaaggagataccggtttagtgggacctccaggccgtaaaataatgttggac agcaaagttaaaggaaagcagggaccaccaggccagcagggatcttcagggcagcctggt cggccaggtctcaaaggaatgccaggtccacctggaaaagcaggaaatagtattataggt tccccaggacttcctggacctccaggattcagaggcccaaaaggagataccggtgaccca ggaatcaccctctatggtataccaggaaaaactggccccacaggactaccaggatctcaa ggcccacgtggtcctcctgggcccccaggtccaattaaggagatcgaaggaccccctgga tttcctggcattgaaggcataattggtttacctggaatgaaaggattctctggaccaaga ggagacaaaggagaaaataaacaatgtgtaccaaagaaaggtgctattggacctcctggc gtgcgaggaaattccggatctgaaggacctttaggaccaaaagggtttaaagggccagaa ggaacaccaggacctcctggaccacgtggtcaacctggttttccagggagagaaggcctt caaggatccaggggagagtcaccatacatggatcaaaaggggagcaaaggagagaaaggc aataatggattccttggaaacccaggaaggaaaggatctgatgggaaagatggacgtcca ggacctccaggtccatcaggagaaaaaggagaaagaggacctatgggatgtataggtgac ctaggtgcgcctgggaaccctggcttcagtggacctcctgggcaagtgggagttcgtgga ctggtaggatatggccttcctgggcctgatggaagcaaaggaaatcaaggtgtacctggg ctacctgggattcccggagcagtaggtgaaaaaggaacaaaaggatacatggtatatgtt cctggaattgctggaagtgagggtgaaccaggcttaccaggagagaggggtttacaagga aaacctggtgtggatggactgccaggatcatttggaagcattggtagtaaaggtgaaagg ggtatcagttctttaggattccccggccctgttggtctcaaaggtgacaaaggagttatg gggccagtgggacctaattctgcaccaggactaccaggcagacctggaccaaatggtact cctggatcacctggaccaaagggtaatataggatatggaaatcctggcattgagggtcga ccaggtcccccaggggaaatagggaatatgggaccatgtggtaatcctggatttcaagga cccccaggaaaaactggggagccaggagcaaatggtgatccaggacaaaagggagatata ggtccttctggtctttctggtcctcaaggttgtcctggaaattgtgaaccgggtgctgct ggtattgctggttttccaggggtaaagggatccattggcttaaaaggtggtacaggactg aacggacagaaaggagagagtggtaaccctggtatagatatcattggacttcctggggta attggggatcgtggctcagaaggacagcctggacagtctggagcagttggatttaaaggc ttgaaaggatttgccgggcttcagggagcaccaggtgaaagaggtgaacaaggcatgatg gggttaccgggatctgtaggaccacctggtccaccaggaattcctggactttctggacca caaggtcttgtggcctctgatggaagcaaaggagataaaggcagtaaaggacaaaaagga gaaaagggaagacaaggaccagttggactgaaaatagatgcgcatattaaaggtgtcaaa ggcagttctggattgtcaggttgccatgggtctgggggagagaaaggagacagaggatat ccaggtaaaccaggagctagaggagctaaaggaacacctggaaaggaaggtccacaaggt ccactaggagatccgggattaccaggaaatacaggagttcctggatttccaggagaacca ggcagctctggagaaatgggaattccaggctataaaggagagaagggagaggcaggaagt attggtgctccaggccatgcaggtttacaaggcataactggcactaaaggagataaggga gagcaaggaccacatggttgcagcatccctggacctccagggttgaagggtaacagagga atcccaggaatagagggggcaataggagatagagggtccccaggacaatccggtattcca ggacttcctggccttcctgggctgagaggagaagatggaattccaggaagaccaggagta ccaggtgaaccaggtccaaaaggcaatgacggactaacaggaccccctggacctcctggc cctaatggtcttagaggaatcccaggagaacctgcaatgccaggtgcccgtggagaaaag ggaacccaaggaactgatggctttccgggcagaattggggaaaaaggagaaccaggttta ccaggtcgactccctggagatctaggtgctcctggcttaaaaggtataaaaggtgattta ggaccacctggttcatgtggtgtaccgggccatcctggacccattggtgatagaggtcct actggaatacaaggaattgtgggagaacctggtccacctggtaggcctggaatgcaaatc gaagggcagaagggtgatattggcctgcctggacttcctggagtaaatggattacgtgga cctgaaggaccaccaggaaaggtggagccatccattaaaggaaacaaaggcaacaaaggt gccgaaggggcaagaggtttgcaaggcatgatgggagacacaggtcctgctggccaccct gggcttcctggtctacccggcagtaaaggagaaaatggagagcctggtgaaccaggattt ccaggagaagcaggaatgaagggtgacagtggccgcccagggtttaggggctcccaagga atgaaaggactcaaagggatacaagggccccccggaaaagacacctatgtggagtgtaaa tcagaacctggtgatattggacttcctggtgttcaaggaattctaggaataatgggttta caaggaaccccaggactaaatggtccaaaaggattaccaggcccaaaaggtgttccagga agggttggaccaccagggttcatagggcatccaggaccaaaaggaaacagaggcatccta ggagtgaaaggtccccctggtttgattggacttaccggcctgcgtggacaagatggacct ccaggcttatctctacccagtggacaaatgcaggggttcatctttactcgccatagccaa acaagagacattcctttatgcccagttgggacccagcagattctcattgggtattcactg ctttacataaaaggcaatgacagggcacacggacaagacctaggaagtcttggaagctgc ctaccaaggttttcaacaatgccctttttgctatgcacccctgacaacatatgtaactat gcatcaaggaatgactattcatattggctttctactgaagagccaatgccagcaagtatg actgcagtttcaggggcacctttacagccatatattggcagatgtgtagtatgtgaaggt actgcaaatatcatcacagttcacagtcaaacaacacaactgccaaattgtcctgtcggc tggagttcactatggcttggttactcatttataatgcacaggggtgcaggagctgaaggt tctggtcaggcactggcttcaccaggttcctgtctagaggaattccgccacacaccattt attgagtgccatacaaagggaacatgcaataattttgcagactcttatagctattggcta gcagcattaaattcatcggatattttcagaaaaccacaatcaaaaacattaaaaacaggt gcactagaaaacatcattagtcgctgtcgggtttgtatgaaacaataa

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