Polypterus senegalus (gray bichir): 120533098
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Entry
120533098 CDS
T08668
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120533098 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120533098 (pitx2)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
120533098 (pitx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
SNaCT5
Motif
Other DBs
NCBI-GeneID:
120533098
NCBI-ProteinID:
XP_039615728
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All DBs
Position
7:191403715..191423608
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AA seq
347 aa
AA seq
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MVALCLSCWLRTPSQVVVFRQTATSNGNYYINGSMDSNCRKVVQSCVQLGVQVQTLENMF
SKDSDIKKNELSPNDSTIIRKDKHFGRQHVPSEKEKNSSKNDDSSVDDPSKKKRQRRQRT
HFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAE
LCKNGFGPQFNGLMQPYEDMYPSYTYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQTM
FSPPNSISSMSMSSTMVPSAVTGVPGSSLNSLNNLNNLSNSSLNTGVPTPACPYAPPTPP
YVYRDTCNSSLASLRLKAKQHSSFGYASVQTPATNLSACQYAVDRPV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccctctgtctgtcctgctggttgaggacaccttcacaggttgtggtattccgc
cagacggcaacttctaacgggaattattacataaacggatcaatggattccaactgccgt
aaagttgtacagtcttgtgtgcagctaggagtacaggtacagaccctggaaaacatgttc
tcaaaagattcggatatcaaaaaaaacgaattatccccaaacgactcaacaatcattaga
aaagacaaacacttcggaaggcagcatgtcccaagtgaaaaagaaaaaaactcgagcaaa
aacgacgactcatcggtggatgatccgtccaaaaagaagaggcagcgacggcagcggacc
cactttaccagccaacagctgcaagaactggaagccacgtttcagagaaatcgatacccc
gatatgtctacccgagaagaaatcgccgtttggacaaacctcacggaagcgcgagtcagg
gtctggtttaagaatcgccgagccaagtggagaaagcgagagcggaatcaacaggcagag
ttgtgcaaaaatggctttggcccgcagttcaacggcctgatgcagccttacgaggacatg
taccccagctacacctacaacaactgggctgccaagggactcacatcggcctccctctcc
accaagagcttccctttcttcaactccatgaatgtgaaccccctgtcgtctcagaccatg
ttctccccgccgaactccatctcgtccatgagcatgtcctccaccatggtgccgtcggcg
gtcacgggcgtgccaggctccagcctcaacagccttaataacttgaataacctcagcaac
agctccctgaatacgggcgtgccaacgccagcctgtccctatgcccctccaacccctccg
tatgtgtacagagacacgtgcaactccagtctggccagcctaagactgaaggccaagcag
cactcgagtttcggatatgccagcgtgcagacccccgccaccaacctgagcgcctgccag
tatgcggtggacaggccagtttga
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