Polypterus senegalus (gray bichir): 120533193
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Entry
120533193 CDS
T08668
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120533193 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120533193 (cnot2)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120533193 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120533193 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
DUF1501
Motif
Other DBs
NCBI-GeneID:
120533193
NCBI-ProteinID:
XP_039615876
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Position
8:complement(158251156..158376137)
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AA seq
563 aa
AA seq
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MVLEVAARSEGKGYSPSILDCRIHSHLGSAGRREINAVTNSMFGASRKKFVEGVDSDYHD
DSMYYSQSSIFRPEKEMLGSPSPSTSSQLSTFGASLYGQQSALAHSMRGMSNNNPQLNRS
LSQGTQLPSHVTPTTGVPTVSLHTPPSPSRSILPMNPRNVMNHSQVGQGIGMSGRTNSMT
SSGLGSPNRSSPSIICMPKQQQSRQPFTINSMSGFGMSRNQGFGINSSLSSNIFNGTDGS
ENVTGLDLSDFPALADRSRREGSGNPTPLLNPLAGRAPYVGMVTKPASEQSQDFSIHNED
FPALPGSNYKDPTSSNDDSKSSLSSSNKNTSSTDGPKFPGDKSSTAQNNNQQKKGIQVLP
DGRVTNIPSGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKF
ASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLL
AAVELFNRDWRYHKEERVWITRAPGMEPTMKTNSYERGTYYFFDCLNWRKVAKVQEFHLE
YDKLEERPHVPSTFNYNPAQQAF
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggttttggaggtggcggcgaggtcagagggtaaaggctattcacccagcatcctcgat
tgtagaatacacagccatcttggatctgcagggagaagagaaattaatgcggtgacaaac
agtatgtttggtgcttcaagaaagaagtttgtagagggggttgacagtgattatcacgat
gacagcatgtactatagccagtcttcgattttccgaccggaaaaagagatgctgggatct
ccatcaccatcgacatcaagtcaactatccacatttggtgcaagtttatatggacaacaa
agtgcactagcccattcaatgaggggaatgagcaacaacaatcctcagttaaatcgcagc
ttatcacaaggtacccagttgccaagccatgtaactccgacgacgggggtaccgactgtg
tcacttcatactccaccttcaccaagcaggagcattttacctatgaatcccaggaatgtg
atgaaccactcccaagttggtcagggaattggtatgtctggcaggacaaacagcatgacc
agttcaggtttaggcagtccaaacagaagctctcccagcatcatatgtatgccaaagcaa
caacagtctcgacaaccttttaccataaacagtatgtctggatttggaatgagcaggaat
caggggtttggcatcaacagctcattatcaagcaacattttcaatggaacagatgggagt
gaaaatgtgacgggtttagacctttcagactttccagcactggcagacagaagcagaagg
gaaggaagtggcaacccaactccattattaaatccgttggctggaagggccccttatgtt
ggaatggtaacgaaaccagcaagtgaacagtcccaagatttttccatccacaatgaagat
tttccagcgttgcctggctccaattacaaggatcccacgtcgagcaatgatgatagtaaa
tcaagtttgagttcatcgaacaagaatacatctagtacggatgggcccaaatttcccggg
gacaaaagttctacagcgcaaaacaacaaccagcaaaagaaggggattcaggtgttacct
gatggacgggtaacaaacattccttcagggatggtaacagatcagtttggaatgattggg
ctcttaacattcatccgggcagccgaaacagaccctggaatggtgcaccttgcattaggc
agcgatttgacaacactaggtctcaatctcaattctccagaaaacctttatcccaaattt
gcatcaccttgggcatctgcgccctgtcgacctcaagatatagacttccatgtaccatcc
gagtatttaacaaacattcacataagggataagctggctgcaataaaactttccagatat
ggtgaagatcttcttttctacctgtactacatgaatggaggagaccttttacagctgttg
gcagcagtggaactatttaacagagactggaggtaccacaaagaagagcgagtatggata
actcgagcacctggcatggagccaacaatgaagaccaattcttatgagagggggacatat
tacttctttgactgtcttaactggaggaaggtagctaaggtacaggagttccacctggaa
tatgacaagctcgaagaaaggcctcatgtgccatccaccttcaactataacccagctcag
caagccttctaa
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