Polypterus senegalus (gray bichir): 120533230
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Entry
120533230 CDS
T08668
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120533230 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120533230 (trip12)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120533230 (trip12)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
HECT type E3
120533230 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
Motif
Other DBs
NCBI-GeneID:
120533230
NCBI-ProteinID:
XP_039615946
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All DBs
Position
1:complement(146889869..147158769)
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AA seq
2068 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQLQDDAAGGRLHSDQAKQKAISPPENRRLFSKASKVQ
SITASGQSRGHSSRRSCISSSSLLLQQEEPETASTSERDKTGHPSKRDSSRAFKRSSSPE
FSSTFFPSPAKKTKALQTAENPLESKRVQSKSKKRQLTQDQQKTPDESALTSKTYNRKSG
AGGGSPTQKRKKTEISSNSNSGPGCQTACAEERSVKPTKLASKSATSAKAGCSTVTDSPS
SASTSSSSSTATSTTIPQGARVKQGKDQNKARRSRSASSPSPRRCSRDKEQNKSAGSSKF
EWAARFSPKVSLPKPKLSLPGSSKSEPSKPGPSGLQAKLASLRKSPKKRSESPPAELPSL
RRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADSDNNQDGANSSAARTDEAPQGA
SASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSG
ASSKAQQLLQGLQATGDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVSDSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPSLAVQLMKQNIAETLRFLLCGASNGSCQDQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANPSASGHLEVKKEDARAQLMKE
DPELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESETFLSCPTKA
CTSGTGSLCTTTITTATTAAVTNATSDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRMPK
RGPRRPKYSPPRDDEKVDNQAKSPTTTQSPKSSFLASLNPKTWGKLSTQTNSTNSEPART
AGVSGLARVPPKDSVSNNRDKIKAWIKEQASRFVERYFNSEHIDSSNPALNVLQRLCTAT
EQLNLQMDGGVECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTCKSDKDAVSRDVRLK
RFLHVFFGCPITFSPQALGHEAYGRIEPSDNGPLMALVHKMNNCLSQMEQFPVKVHDFPS
GNGTGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRIREEDEDSDDDGSDDEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQF
SIQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVKEDEEGSKEIVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPTVTNPLEAYLISSPPESITFEDPSLDVILLLRVLHSISRYWF
YLYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPSWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEG
TKYMFSSGGLFAVPFGRTTKPAHIAKVKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWM
LRHESSISSHDLINIDPGVAKSVNHLEDIIRQKKKLEQDRTQVETRESLQQALESLNMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVNIHNLEEYLRLVVYWTLNEGVSRQFESFREG
FESVFPLHHLQYFYPEELDQLLCGSKTETWDVKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaactacaagacgacgctgctggaggaaggttacattcagatcaggcaaaa
caaaaagcaatttctcctcctgagaatagaagacttttttctaaggcatcaaaagtgcag
tccatcactgcctctgggcaatccagaggacacagctctagaagaagctgcatttcttca
tcgtccttgttactgcagcaagaggaaccagagacagcaagtacttcagagagagacaaa
acggggcacccgtcaaagagagatagctcccgagcatttaagcggagttcaagccccgag
tttagcagcacattctttcccagccctgcaaaaaaaacaaaagcacttcaaactgctgaa
aaccctttggaatcaaaaagagttcagtccaagtctaagaaacgacaattgactcaagac
cagcaaaagacacctgacgagtcagcattgacaagcaagacttataacagaaagagtggg
gctggtgggggctcccctactcaaaaacggaaaaagactgagatttcctcaaattcaaat
agtggtcctggttgtcaaacagcctgtgctgaggagaggtctgtaaaacccaccaagctg
gcttctaaatcagcgacatcagccaaagctgggtgtagcactgttacagattcgccctct
tcagcttctacatcctcttcatcctccactgcaacctctaccaccatacctcagggtgcc
cgtgtgaaacaaggaaaagaccagaataaagcacggcgttcccgctctgcctccagccct
agccctcgtaggtgtagccgtgacaaagagcagaacaaatctgctggatcctctaaattt
gagtgggctgcccgtttcagccctaaagttagcctgccaaaaccaaaactgtctctgcca
gggtcttccaaatcggagccatctaaacctgggccttctggacttcaggctaaactagca
agcttaagaaaatctccaaagaaacgcagcgagtccccaccagcagagctccccagttta
cggaggagcacacgccaaaagaccacgggctcctgtgctagcaccagtcggcgaggctct
ggcctgggcaaacgaggagcagctgaagctcgccgacaagaaaaaatggcagattctgat
aacaaccaggatggagcaaactcttcagctgcacgcacagatgaagcaccacaaggagct
tcagcttctagttccgtggctggtgctgtaggaatgacaacctctggggaaagcgagtct
gatgattcagaaatgggtcgtttgcaagctctcttggaagcaaggggtcttcctccacac
ctctttggccctcttggtcctagaatgtcacagcttttccacagaacgattgggagtggt
gcaagctcaaaagcccaacagcttcttcagggtctccaggccaccggagatgaatctcaa
caactccaggctgtaattgagatgtgtcaacttttagtcatgggaaatgaagaaacacta
ggaggatttccagtcaagagtgttgtgcctgcattgataactttgctgcaaatggagcac
aattttgatattatgaatcatgcgtccagggctttgacatacatgatggaggcacttcct
aggtcttcggcagtagtggttgatgccatcccagtgttcttggaaaaactgcaagtcatt
cagttcattgatgtggcagaacaggcattgacagctcttgaaatgctttcacgtagacac
agcaaggcaatcttgcaggctggaggcttggcagattgcttgttgtatctggaattcttc
agcattaatgctcagagaaatgcactggctattgcagcaaattgttgccagagtattacc
cctgatgagttccattttgtttctgattcactgcctttacttacccaaaggctgactcac
caggataagaaatctgttgaaagcacttgcctttgttttgcccgccttgtagacaacttc
cagcacgaagagaacttgctacaacaggttgcatcaaaagacttgttaaccaatattcag
cagcttttggtagtgactcctcctattttgagctcaggcatgttcatcatggttgtccgc
atgttttctcttatgtgttctaattgtccttctctggctgtacaacttatgaagcaaaac
attgcagaaactctaagatttcttctgtgtggtgcctcaaatggcagctgtcaagaccag
atagaccttgtgccacgtagtcctcaagaactttatgaactaacctctctcatctgtgag
ctaatgccttgcttgcctaaagaaggtatttttgctgtggatacaatgctgaaaaaggga
aatgctcaaaacactgatggtgcaatctggcagtggagagatgaccgaggtctgtggcat
ccttataaccgaattgacagtcgcataatcgagacagctcatcagaatggtgaagatgag
attagcttgtccacccttggacgtgtttatactattgattttaattctatgcagcagatc
aatgaggatacagggacggcacgagcaattcagcgaaaacccaaccctttagccaatccc
agtgcaagtggacatttggaggtgaagaaggaagatgcaagagcacagctgatgaaagaa
gatccagaactagctaaatgctttattaagactttgtttggtgtgctgtatgaagtatac
agttcttcagctggtcctgctgtcagacataagtgccttagagcaattcttaggattatt
tattttgcagatgcagagcttctgaaagatgtgttaaaaaatcatgcagtttctagccac
attgcttctatgctttcaagtcaggatctcaaaatagttgtgggggcactacaaatggca
gaaattttaatgcagaagttgccagatatattcagtgtttattttcgaagagaaggtgtg
atgcatcaagtgaagaacttggctgaatcagaaacttttcttagttgccccacaaaagct
tgcactagtggaactggaagtctttgtacaaccaccattactacagcaaccaccgctgct
gttactaatgctacgtctgacctcggctctccaagtttccaacacagcatggatgactca
ttggatcttagtccccagggtcgacttagtgacgtcttaaaaagaaaaagaatgccaaag
cgagggcctcgaaggccaaaatattcgcctccaagagatgatgagaaagttgacaatcaa
gctaagagtcctacaacaacacagtctcccaagtcctcgttcctggcaagtctgaatcca
aaaacttgggggaaattaagcacccaaacaaatagcaccaattcagaacctgcacgtaca
gctggagtcagtggcctagcacgggttcctccaaaagattcagtatccaacaacagagat
aaaattaaggcttggattaaggagcaagcaagtagatttgtcgaacgttacttcaattca
gagcatatagattcaagcaaccctgcactgaatgtactacaaagactttgcacagcaaca
gaacaactcaacctacagatggatggaggagtcgagtgccttgtagaaattcgcagtata
gtctcagaatcagatgtatcatcatttgaaatccaacacagtggatttgtaaaacaattg
ctgctatacttgacgtgtaaaagtgacaaagatgctgtgagtagggatgtcagattaaag
agattcctacatgtgttctttggctgcccgattactttctcacctcaggcactgggacat
gaggcatatggacgaatagagccatcagacaatggaccgctaatggcacttgtgcacaaa
atgaacaactgtcttagccagatggaacagttccctgttaaagtacatgatttccctagt
ggaaatgggactgggagcagaggatctcaggccttaaaattttttaacacccatcaactc
aaatgccagcttcagagacatccagactgcactaatgtgaaacaatggaaaggtggtcct
gtgaagatagatcctctagcattggtgcaggcaattgaaagataccttgttgttagaggt
tatgggagaattcgtgaagaagatgaagacagtgatgatgatggttctgatgatgaaatt
gatgagtctcttgcagcacagttcttgaattctggaaatgtgagacacagattgcagttt
tacattggtgatcatttattaccttacaatatgacagtgtaccaggctgttagacagttt
agtatacaagctgaagaggagcgcgagtctacagatgatgaaagcaaccccttaggaaga
gcgggaatttggacaaaaacccatacgatctggtataaacctgttaaagaagatgaagaa
ggcagcaaagaaatagtgggaggaaaaagaggacgtgctcaaacggctccaacaaaaacc
tctcctcgtaattcaaaaaagcatgatgagttgtggcatgatggtgtgtgccccacagta
acaaaccctttagaagcttatctcatttcatcaccaccagaaagtattacatttgaggac
ccttctcttgatgtcattcttcttttacgagttctgcattcaataagcagatactggttt
tatctctatgataatgcagtttgcaaagagatcattcctacaagtgagtttattaatagc
aaattaactgccaaagcaaacagacaacttcaggatccgttggttatcatgactggaaac
atcccatcatggcttacagaacttggaaaaacgtgccctttcttctttccatttgacact
cgtcaaatgcttttctatgtgactgcctttgacagagatcgtgccatgcaaaggttgctg
gacacaaatccagaaatcaatcagtctgattcccaagacagcagagttgcaccccgtcta
gacaggaaaaagcgcacaataaatcgtgaggaactgcttaaacaggcagaatcagtaatg
caagatttgggtagctcaagagcaatgctggaaattcaatatgaaaatgaagtgggaact
ggccttggacccacgctggagttttatgcactagtatctcaggaacttcagagggctgac
ttgggtttgtggaggggggaagaagtaacgctggcaaatcccaaaggaagtcaggaaggg
accaagtacatgtttagctcaggtggcctgtttgctgttccatttggaagaacaacaaaa
ccagcacacatagccaaggtgaaaatgaagtttcgttttctgggcaagttaatggccaag
gccataatggatttccgactgctggaccttcctcttggactgccgttttacaaatggatg
ctccgtcatgagtcttcaattagctcacatgacctcataaatattgatcctggagtggca
aaatcagtaaatcacctagaagacatcattagacagaaaaagaaactagaacaggaccgg
acacaggtagagacacgggagtcacttcagcaagcactggaaagtcttaacatgaatggc
tgttccgtagaagaccttggtcttgactttactttgcctggatttcctaatattgagctg
aaaaaaggaggcaaggacattccagtaaacattcacaacctggaggaatatctgagactg
gtggtgtactggacgttgaatgaaggagtttctcggcaatttgaatcattcagagaagga
tttgagtcagtcttccctctccatcaccttcagtatttctatccagaagagcttgatcag
ttgctctgtggtagtaaaactgaaacctgggatgtaaaaacattgatggagtgctgtaga
ccagatcatggttacacccatgacagccgtgctgtcaagttcctctttgagattctcagt
agttttgattctgaacaacaaaggttgtttctccagtttgttaccggtagcccaagactt
cctgttggaggctttaggagtttgaatccccctttgacgattgttcgcaagacatttgag
tctacagagaaccctgatgactttcttccctctgtaatgacctgtgtcaattatctcaag
ctaccggactattccagtattgagatcatgcgagaaaaacttttaatagctgctagagag
gggcagcagtcattccatctctcctga
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integrated database retrieval system
