Polypterus senegalus (gray bichir): 120533504
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Entry
120533504 CDS
T08668
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120533504 (trpc1)
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120533504 (trpc1)
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Ortholog
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
120533504
NCBI-ProteinID:
XP_039616356
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Position
1:148672375..148773282
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AA seq
792 aa
AA seq
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MMRLNVSPQCRSTIMTALYPSTASASPDKYLALKDVREVKEDTTLDEKLFLLACEKGDYY
MVKKLLEEKRNDELNINCVDVLGRNAVTISIENENLDILQLLLEHGCQTTDSLLVAIDSE
VVGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQ
DVSLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELS
ADLKELSLVEVEFRTDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEEPVDKRGLL
EERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLTVGLLW
PVLSVCYFLAPKSRVGQVIHTPFMKFIIHSASYFTFLLLLNLYSLVYNEDKKNTMGPALE
MIDYLLIVWIAGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLSTFALKIVAHSKFP
DIADRKDWDAFHPTLVSEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFL
GLFLLVLFSFTIGLTQLYDKGFANEGEKDCAGIFCQRQSNDTFHSFIGTCYALFWYIFSL
AHVALFVTRLSYTDELQSFVGALIVGTYNVVVVIVLTKLLVAMLHKSFRQIANHEDKEWK
FARAKLWLSYFDDKCTLPAPFNIIPSPKTICYLVTSLNKWICSHTTTGKVKRQNSLKEWR
SLKQKRDENYQKVMCCLVHRYLTSTRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGF
RTSKYAMFYPRN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgactcaatgtgtcgccgcagtgccgctcgacgattatgactgctctctacccg
agcaccgcttcggcctcgccggataaatacctggctctgaaagatgtgagggaagtgaag
gaggacacaacgttggacgaaaagctctttctgctggcgtgcgagaaaggagattattat
atggtgaagaaacttcttgaagagaaaagaaatgatgaacttaatatcaactgtgtggat
gtattaggaagaaatgctgtgacaatctctattgaaaatgagaatctggatatactgcaa
cttcttctagaacatggttgtcagacaacagattcgcttttggttgcaattgattcagaa
gttgttggtgctgttgatatattattaaaccatcggccaagaaggtcttctaagccctca
attgcgaaactaatgcaacgtattcagaaccctgaatattccacaacaatggatgtagcc
ccagtaattctagctgcacatcgcaacaactatgagattcttaccatgctgcttaaacag
gatgtctctttgccgaggcctcatgctgtgggttgcgagtgtactttgtgtaatgccaaa
aataaaaaggacagtctacgccattctagatttcgtcttgatatttatcgctgcctggca
agcccctcacttataatgctgacagaagaggatcctatactgagagcctttgagctcagt
gctgatctgaaggagcttagtcttgttgaagttgaatttagaactgattatgaagagctg
gcaaagcaatgtaagatgtttgcaaaagaccttcttgcccaggctcgcaattcaagggaa
cttgaggtgattttaaaccatacctcaagcgaggagcctgtggacaaacggggcctcctg
gaggagcgaatgaatctgagccgtcttaaactggccattaaatacaaccaaaaagagttt
gttgcccagtcaaattgtcaacaatttctgaacactgtctggtttggacaaatggctggt
tataggcgaaagcacacatgtaagaagatcctgactgtcctaactgtgggcctcctttgg
ccagttctgtctgtctgctacttcttggcacccaaatccagggttggacaagtcatccat
actcctttcatgaaatttataatacacagtgcatcatattttacgtttcttcttctactc
aacctctactctttagtttacaatgaagataaaaagaacacaatgggccctgctttagag
atgatagactatctcctcattgtttggattgctggaatggtgtggtcagatgtgaaaagg
ttgtggtatgaagggctggaagattttctggaagaatctcgtaatcagcttagctttgtt
atgaactccttgtacttgtcaacatttgctctcaaaattgtggctcacagtaagtttcca
gatattgcagaccggaaggactgggatgctttccaccctactctggtttctgagggactg
tttgcttttgccaatgttcttagctatcttcgactgttttttatgtacaccacaagttct
attcttggacctttgcagatctcaatgggacagatgcttcaggactttggtaaatttctt
ggactatttcttcttgttctgttttccttcaccattggtttaactcaactttatgacaag
ggattcgccaacgaaggggagaaagactgtgcgggcatcttctgtcagcgacagagcaat
gatacattccattcgttcattggcacatgctatgccctcttctggtacattttttcccta
gcccatgtggcactgtttgtaacacgactgagctacactgacgagttacagtcatttgtt
ggagccttaattgttggcacatacaatgtggtggttgtgattgttctgaccaaattactt
gttgccatgttacacaaaagcttccggcaaatagcgaatcatgaagacaaagagtggaag
tttgcccgtgcaaagctatggctcagctattttgatgacaagtgcactttacctgccccc
tttaacatcattccttcacctaagaccatctgctatctagtcaccagccttaacaagtgg
atctgttcccacaccacgacaggcaaggtcaagcggcaaaacagcctcaaagagtggagg
agcctgaagcaaaaacgagatgaaaattaccagaaggtaatgtgttgtcttgttcatcga
tacttgacatcgacgaggcagaaaatgcaaagcactgaccaggcaactgtagaaaacctc
aacgaactcaggcaggacctctccaagtttcgaaatgaaatgagggaccttctgggcttt
cgtacttcaaagtatgcaatgttttatccaagaaactaa
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