Polypterus senegalus (gray bichir): 120533676
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Entry
120533676 CDS
T08668
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120533676
04121 Ubiquitin system [BR:
psex04121
]
120533676
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120533676
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120533676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
FF
GRDB
Motif
Other DBs
NCBI-GeneID:
120533676
NCBI-ProteinID:
XP_039616505
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All DBs
Position
8:23064463..23066314
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AA seq
578 aa
AA seq
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MRSHLLNHHPEKLREDTRSKIQSGQKTIKEAFTASLPHNSARAQEITRGIGEYIAKGLRP
FSVVDNEGFKRLVNMLEPKYKIPSRDSQTILPALYKETRAKVAQSIKQAECISITTDGWT
SRATQSYVTITASAMTSEWEIKTFVLQTRVLFESHTGHNIDKVLKSAVSEWELDMIYNNN
HQGIAVVTDNARNMGVAVNEAGLSPHVKCFAHTLNLASQAGLKVNRVSRLLGRVRRVAAF
FHRSSTATAVLTSKQQMLNLPVHKLIMDVVTRWNSSLDMIERYLEQQQAIAAALLSSEVR
SNALEIDTLDAADIADAEEIVKLLTPLKKATTVLCDESRPTISLIMPLKHMIQVSMALCD
VDSNTISQMKAAILNDLADHYQGEQAEFLYESSALDPRFWALPHLDNSERDEIFNRLKLK
ATQMQNQNPSEEDGAAPGSHEHVAGHSKTDLPQKAHVVGGVSPPSKKTALEDLLGDSFSQ
GDSRTQHTAQIDADIDVYRKETPISHMACPLKWWKDNAQLYPLLSTLAKSYLSVPATSVP
SERVFSVAGDVVNAQRSQLSPDNVDMLIFLKKNLSLSE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaggagccatttgttaaatcatcaccccgaaaagttacgtgaagatacgaggagcaaa
atccagtcgggccaaaagactataaaagaagcgtttacagcctcactcccccacaacagt
gcgagagcacaagaaatcacaagaggcattggtgaatatatagccaaaggcctacggccc
ttttcggtggtggataatgaaggttttaagaggttagtaaacatgctggagccaaagtat
aaaatcccgtcgcgggatagtcaaactattttaccagctctttacaaagagacaagggcg
aaagttgcacagagcatcaagcaagcagagtgcatctcaatcaccacagatgggtggact
tcacgagctactcagagctatgttaccatcacagcaagtgctatgacaagtgaatgggag
ataaaaacttttgtcctacagacacgggtactctttgagtcacacactggacacaacata
gacaaggtgttaaaatccgctgtttcagagtgggagcttgacatgatttacaacaacaat
caccagggcattgctgtggttactgacaatgcaagaaacatgggtgtagcggtgaatgag
gctggtctgtccccacatgtaaagtgttttgctcacaccttaaatcttgcgtcccaggca
ggtttgaaggtaaaccgtgtcagtcgtctgcttggcagagtgaggcgtgtagcagcattt
tttcaccgcagttcaactgcaacagctgtgctgacctccaagcagcaaatgttaaacctg
ccagtacataaactgataatggatgtagtaactaggtggaacagctcacttgacatgatt
gagcgctacctggagcaacaacaggcaattgctgcagccctactgagttctgaagtcagg
agcaatgcacttgaaatagacactctagacgcagctgacatcgcagatgctgaggagatc
gttaaactgctcacacccttgaaaaaagcaaccactgtgctgtgcgacgaatctcgacca
acaatctctcttatcatgcctctcaaacacatgattcaagtgagcatggcactgtgcgat
gtagactcaaacaccatctctcaaatgaaggcagcaatactgaatgatttggcagaccat
taccaaggggagcaagcagagtttctgtatgagagcagtgcgttggacccccggttctgg
gccctcccccatctggataacagcgaaagggatgaaattttcaacaggctcaagttaaaa
gcaacacagatgcagaaccagaaccctagtgaagaggacggtgcagcaccaggcagccat
gaacatgtagctggacactcaaaaactgacctgccacaaaaagcacatgttgtgggaggt
gtctctcctccatccaaaaagactgctcttgaagatctccttggagattcttttagtcaa
ggggacagcagaacacagcacactgctcagattgatgcagacattgacgtgtaccgcaaa
gagacccctatctcacacatggcttgtcctctcaagtggtggaaagacaatgcacaactg
tacccactgctgtcaaccttggccaagtcatatctctctgtcccagcaacctcagtccca
agtgagagggttttttctgttgcaggggacgttgtaaatgcccagagatcccagctttca
ccagataatgttgatatgctaattttccttaaaaaaaatctgtctctgtctgaataa
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