Polypterus senegalus (gray bichir): 120533715
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Entry
120533715 CDS
T08668
Symbol
nedd1
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120533715 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120533715 (nedd1)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
120533715 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
120533715 (nedd1)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
120533715 (nedd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_LRRK2
Beta-prop_WDR75_1st
WD40_like
Beta-prop_Vps41
PEP5_VPS11_N
eIF2A
Beta-prop_WDR35_TULP_N
KNTC1_N
WD_LRWD1
Beta-prop_SPT8
WDR90_beta-prop_4th
Frtz
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
120533715
NCBI-ProteinID:
XP_039616560
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Position
8:4681525..4784696
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AA seq
674 aa
AA seq
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MEDSIRLVSAGDDIKIWNSSSMTVVDQFSPHTPSQTVSRVCWSSNNHFLVSASGTGDKIV
VSSCKSSPVPILELAEGKKQTCINLNSTSQFIVSGGLDSSVNVWDLKSKKLYRSLKDHKD
VVTCVSFNSNDSYIASGSASGEIILHSITTNLSSTPFGFGSSQPIQDLKYSYIKKSLMGS
VSDSGTVVLWDANTQKSLHSFENAHKAPACGLCFSPANELLFVTVGLDKKIICYDSSSKI
LLRSLVAESPLTAIDFMPDGAALAVGSSRGKVYLYDLRMLTSPVKVVTAHKTSVQCVKFQ
NALSHIKSSSKAPVSKSSSSLSAATSRRAAVKTGNPVANNLMSSVGRDVQQKPAAILEQN
SGPVTVEKVDGRPDGRGIPNSTSLDVFPSKETDSIKGTDGLPILDKFDSVGRNSLSDVFS
PIRDDYSFQKSSADLAKGDVMDFMSHFSGNLTSHKIPTSGLQTSNTLLSFGESPPKAEDA
DKTHSDSLKVGQATVGSHDTQNLIKVNRALSESANSSGCGNTSTPVMSSIKTLEPNERLG
KDLQTKLLYDSPVSGAPCGGTALSPEPMLSAALTEGVVSSLSEKIAGTINNNGSGPPLTS
IQIHFIRKMIQETLEDFREACHKDIVNLQVEMIRQFYIQLNEIHCLIEKYSVNDTLVAEI
EKLKEENKRLRANF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagcatccgcctggtatcagcgggagatgacataaagatctggaactcctcg
tcaatgactgtggtggatcaattcagccctcacaccccaagtcagactgtttctagagtt
tgttggagcagcaataatcattttctggtcagtgcctctggaactggagataaaattgta
gtgtcaagctgcaaatcttccccagttcccattctggaacttgcagaagggaaaaagcaa
acctgtataaacttgaactctacatcccagttcattgttagtggtggtctggatagctct
gtcaatgtctgggatctgaagtcaaagaaactgtaccgatcccttaaggatcataaggat
gttgttacttgtgtatcatttaatagtaacgattcctacattgcctctggttctgcaagt
ggagagataattcttcacagcattactactaatctctccagtactccgtttgggtttggg
agttcccagccaatccaggacctgaagtactcttacattaagaagtctttaatgggcagc
gtgtctgacagtggtaccgttgtcctttgggatgctaatactcagaaatctctccatagc
tttgaaaatgcccacaaggctccagcctgtggactctgtttctcacctgctaatgagcta
ctctttgttactgttggcttagataaaaaaataatttgctatgactcctccagtaagatt
cttctgcgcagtctggttgctgaatcccccctcacagctattgactttatgcctgatggt
gctgcactggcagtgggttcatctcgagggaaggtgtatctttatgacttaaggatgtta
acatctcctgttaaggtggtaactgctcacaagacttcagtacagtgtgttaagttccag
aatgcactatcccacatcaagtcaagcagtaaagcaccagttagtaagtcctcgagctcc
ttgtcagctgccaccagcaggagggcagcagtgaagactggtaatccagttgcaaacaac
ctcatgtcatctgtgggacgagatgtacagcaaaagccagccgcaattcttgagcagaat
agtggaccagtgactgtggaaaaagtggatggaagacctgatggcagaggaatacctaat
agcaccagtttggatgtgttcccatcaaaagaaaccgacagcattaagggaactgatggg
cttcctattcttgacaaatttgactcagttggccgaaatagcctcagtgatgtgttctcc
cctatacgagatgattatagttttcaaaagtcaagcgctgatcttgctaaaggagatgtg
atggattttatgtcgcatttttcgggaaaccttacatctcataagattcctactagtggc
ttacagacctcaaacactcttctctcatttggcgaatcacccccgaaagcagaagatgca
gacaagactcacagtgacagtcttaaagtaggacaggcaacagttggaagccatgacaca
cagaatttgatcaaggtgaatcgtgccttatctgaatcagccaattcaagtggttgtggt
aacacaagcacacctgtgatgtcatccataaaaactcttgaaccaaatgagaggctagga
aaagatttacaaacaaagctcctgtatgactctccagtaagtggagctccttgtggtgga
acagctttgtctccagaacccatgttgtctgctgctctaacagaaggtgtagtctcttca
ttatctgaaaagatagcaggaactattaacaacaatggaagtggtcctcctctgacctca
attcagattcattttatccgaaaaatgatccaggaaacgctggaagacttcagggaagcc
tgccacaaagacattgtcaacctgcaagtggagatgataaggcagttctacattcagttg
aatgaaatacactgtctcattgaaaaatattcagttaatgacactctagttgctgaaatt
gagaagctgaaggaggaaaacaaaaggctgagggcaaatttttga
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