KEGG   Polypterus senegalus (gray bichir): 120533715
Entry
120533715         CDS       T08668                                 
Symbol
nedd1
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
psex  Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:psex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psex03036]
    120533715 (nedd1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:psex04812]
    120533715 (nedd1)
Chromosome and associated proteins [BR:psex03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     120533715 (nedd1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     120533715 (nedd1)
Cytoskeleton proteins [BR:psex04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     120533715 (nedd1)
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_LRRK2 Beta-prop_WDR75_1st WD40_like Beta-prop_Vps41 PEP5_VPS11_N eIF2A Beta-prop_WDR35_TULP_N KNTC1_N WD_LRWD1 Beta-prop_SPT8 WDR90_beta-prop_4th Frtz Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 120533715
NCBI-ProteinID: XP_039616560
LinkDB
Position
8:4681525..4784696
AA seq 674 aa
MEDSIRLVSAGDDIKIWNSSSMTVVDQFSPHTPSQTVSRVCWSSNNHFLVSASGTGDKIV
VSSCKSSPVPILELAEGKKQTCINLNSTSQFIVSGGLDSSVNVWDLKSKKLYRSLKDHKD
VVTCVSFNSNDSYIASGSASGEIILHSITTNLSSTPFGFGSSQPIQDLKYSYIKKSLMGS
VSDSGTVVLWDANTQKSLHSFENAHKAPACGLCFSPANELLFVTVGLDKKIICYDSSSKI
LLRSLVAESPLTAIDFMPDGAALAVGSSRGKVYLYDLRMLTSPVKVVTAHKTSVQCVKFQ
NALSHIKSSSKAPVSKSSSSLSAATSRRAAVKTGNPVANNLMSSVGRDVQQKPAAILEQN
SGPVTVEKVDGRPDGRGIPNSTSLDVFPSKETDSIKGTDGLPILDKFDSVGRNSLSDVFS
PIRDDYSFQKSSADLAKGDVMDFMSHFSGNLTSHKIPTSGLQTSNTLLSFGESPPKAEDA
DKTHSDSLKVGQATVGSHDTQNLIKVNRALSESANSSGCGNTSTPVMSSIKTLEPNERLG
KDLQTKLLYDSPVSGAPCGGTALSPEPMLSAALTEGVVSSLSEKIAGTINNNGSGPPLTS
IQIHFIRKMIQETLEDFREACHKDIVNLQVEMIRQFYIQLNEIHCLIEKYSVNDTLVAEI
EKLKEENKRLRANF
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggaggacagcatccgcctggtatcagcgggagatgacataaagatctggaactcctcg
tcaatgactgtggtggatcaattcagccctcacaccccaagtcagactgtttctagagtt
tgttggagcagcaataatcattttctggtcagtgcctctggaactggagataaaattgta
gtgtcaagctgcaaatcttccccagttcccattctggaacttgcagaagggaaaaagcaa
acctgtataaacttgaactctacatcccagttcattgttagtggtggtctggatagctct
gtcaatgtctgggatctgaagtcaaagaaactgtaccgatcccttaaggatcataaggat
gttgttacttgtgtatcatttaatagtaacgattcctacattgcctctggttctgcaagt
ggagagataattcttcacagcattactactaatctctccagtactccgtttgggtttggg
agttcccagccaatccaggacctgaagtactcttacattaagaagtctttaatgggcagc
gtgtctgacagtggtaccgttgtcctttgggatgctaatactcagaaatctctccatagc
tttgaaaatgcccacaaggctccagcctgtggactctgtttctcacctgctaatgagcta
ctctttgttactgttggcttagataaaaaaataatttgctatgactcctccagtaagatt
cttctgcgcagtctggttgctgaatcccccctcacagctattgactttatgcctgatggt
gctgcactggcagtgggttcatctcgagggaaggtgtatctttatgacttaaggatgtta
acatctcctgttaaggtggtaactgctcacaagacttcagtacagtgtgttaagttccag
aatgcactatcccacatcaagtcaagcagtaaagcaccagttagtaagtcctcgagctcc
ttgtcagctgccaccagcaggagggcagcagtgaagactggtaatccagttgcaaacaac
ctcatgtcatctgtgggacgagatgtacagcaaaagccagccgcaattcttgagcagaat
agtggaccagtgactgtggaaaaagtggatggaagacctgatggcagaggaatacctaat
agcaccagtttggatgtgttcccatcaaaagaaaccgacagcattaagggaactgatggg
cttcctattcttgacaaatttgactcagttggccgaaatagcctcagtgatgtgttctcc
cctatacgagatgattatagttttcaaaagtcaagcgctgatcttgctaaaggagatgtg
atggattttatgtcgcatttttcgggaaaccttacatctcataagattcctactagtggc
ttacagacctcaaacactcttctctcatttggcgaatcacccccgaaagcagaagatgca
gacaagactcacagtgacagtcttaaagtaggacaggcaacagttggaagccatgacaca
cagaatttgatcaaggtgaatcgtgccttatctgaatcagccaattcaagtggttgtggt
aacacaagcacacctgtgatgtcatccataaaaactcttgaaccaaatgagaggctagga
aaagatttacaaacaaagctcctgtatgactctccagtaagtggagctccttgtggtgga
acagctttgtctccagaacccatgttgtctgctgctctaacagaaggtgtagtctcttca
ttatctgaaaagatagcaggaactattaacaacaatggaagtggtcctcctctgacctca
attcagattcattttatccgaaaaatgatccaggaaacgctggaagacttcagggaagcc
tgccacaaagacattgtcaacctgcaagtggagatgataaggcagttctacattcagttg
aatgaaatacactgtctcattgaaaaatattcagttaatgacactctagttgctgaaatt
gagaagctgaaggaggaaaacaaaaggctgagggcaaatttttga

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