Polypterus senegalus (gray bichir): 120533757
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Entry
120533757 CDS
T08668
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04120
Ubiquitin mediated proteolysis
psex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120533757 (syvn1)
04120 Ubiquitin mediated proteolysis
120533757 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120533757 (syvn1)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120533757 (syvn1)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120533757 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-RING-like
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING_Vps41
FAR1_N
zf-HC5HC2H
zinc_ribbon_16
FANCL_C
zf-Nse
zf-C3H2C3
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
120533757
NCBI-ProteinID:
XP_039616625
LinkDB
All DBs
Position
8:9229472..9260585
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AA seq
622 aa
AA seq
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MVRTMVVTATSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAELEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRVLSLMILLGTLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYILHSIDLQNENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQATDNVCIICREEMVT
GAKRLPCNHIFHASCLRSWFQRQQTCPTCRMDVLRASLPNQTPAPAPAQQPAPPAAPNPQ
MPPPPNIPPGILPPFPPGMFPFWGPFPAAGPAAGGANVMQTPPTTPQPTPTATTAENLGE
ATNPSSPRATGTGPGPEAAPAGSIPAFPFSFPPPWMGMPPPPPPPPPFGMPPMPVPPPGF
SGLSDDELRAMEGHERRNLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGPAPTSAGST
EGASTSTAQLNGSAENNLQSEESQQSVPMENGSELEGAVGFTTSAPDSTTGDLDDVEGEP
DTAELRRRRLRKLETSVPSSGL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaaccatggtcgtcacagccaccagcctggctctcaccactgctgtggtggca
catgcctactacctaaagcatcagttttaccctactgttgtataccttacaaagtctagt
cctagcatggcggttttatacatccaagcatttgtactggtatttcttctaggaaagttt
atgcgaaaagtattttttggacagctgcgtgctgctgagttagagcatcttattgagcgt
tcttggtatgctgtgactgagacctgtctggccttcactgtcttcagggatgacttctct
ccacgatttgttgcactgtttacgctccttctcttcctaaaatgttttcactggctagct
gaagatcgtgttgattttatggagaggagtcctaatatttcctggctgtttcatttccgt
gtcctgtctttaatgatattgctgggcacacttgatttcctgttcgttaaccatgcctgc
cacagcatcatcacccgtggggcatcagtacagttggtgtttggttttgagtatgcaatc
ctaatgaccatggttttgacaacgttcattaagtacatcctacactccatagatcttcaa
aatgaaaacccttgggacaataaagctgtttatatgctgtacactgaacttttcacaggt
ttcatcaaagtgctactctacatggctttcatgaccattatgataaaggttcacacgttc
ccattgtttgctatccgccctatgtacctggcaatgaggcagtttaagaaagctgtaact
gatgctatcatgtcaagacgggcaatccgtaatatgaataccctgtaccctgatgccact
ccagaagaactgcaggcaactgataatgtttgcattatttgccgtgaagagatggtgact
ggtgccaaaaggctaccctgcaatcacatttttcatgctagttgtctacgttcgtggttc
cagcggcaacagacttgtcccacctgtcgtatggatgtattgcgggcttctcttcccaat
cagacacctgctcctgctcctgcacagcaacctgctccacctgcagcaccaaacccccag
atgccaccacctccaaacattcctcctggaattttacctccttttcctccagggatgttc
cctttttggggtcccttccctgctgctggacctgctgcaggtggtgcaaatgtaatgcag
actccaccaacaactccacaacccacacccacagccacaaccgccgagaatttaggagaa
gctaccaatcctagtagtcctcgtgctactgggactgggcctggacctgaagctgcgcct
gctggcagcatcccagcgtttccattttctttccctcctccatggatgggcatgccgcct
ccacctcctcctcctcctccttttggaatgcctccaatgccagtaccgcctccaggcttc
tctggcctcagtgatgatgaactacgtgccatggaaggtcatgaaagaagaaacctggag
gcccgactgcagtgtctgcagaatattcacacactcctggatgctgcaatgctgcagatc
aatcagtacttgactgtactggccacaatcgggcctgctcctacttctgctggttcaact
gaaggggcttctaccagcacagcccaactaaatgggtctgctgaaaacaacttgcagagt
gaggaatcccagcaatctgtgccaatggaaaatggctctgagctcgagggagcagttggt
tttactacatcagcaccagactcgaccacaggagacctggacgacgtggaaggagagcca
gacacggcagagttgaggagacgaaggcttcgtaaactggaaacctccgtaccatcgtcg
ggactttga
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