Polypterus senegalus (gray bichir): 120533773
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Entry
120533773 CDS
T08668
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04136
Autophagy - other
psex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120533773 (atg2a)
04136 Autophagy - other
120533773 (atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120533773 (atg2a)
03029 Mitochondrial biogenesis [BR:
psex03029
]
120533773 (atg2a)
Membrane trafficking [BR:
psex04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120533773 (atg2a)
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120533773 (atg2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
EKLF_TAD1
Motif
Other DBs
NCBI-GeneID:
120533773
NCBI-ProteinID:
XP_039616656
LinkDB
All DBs
Position
8:complement(10933403..11042993)
Genome browser
AA seq
2018 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFLQERLSLDQLSLDLYNGSGVIRDIHLDVWSVN
ELLDSMGAPLEIVDGFIGSISVTIPWAALVTDNCTVIVNGLQITCRPKYRTTTGVDSQCW
SSCMTSSMQLAQECLKETPEEGDEPPAPLEGLEMFAQTIETVLRRIKVTFLDVIIRVEHT
PLVSQSGVALEVHIKRLDYCDEAVKDASQAVPVDIHQPPAFVHKILQLSGVQLYYEKLCE
NQEPIYLNSDSEEIRHPQCPLLIGTCSGYMETTVKIKQNDALPGPKLELDGKMGSLHLLL
STDQIFHLTDLLSSLHVYTETALLVDGGKSRPLGSEDLRLIEEDLNKQLNVESTETDKGP
QSFNTMNFDNAEMFYSMAPGMGTSVTSVNTVSDLSEPDMDSSLHSEYSSCAFQPHSLSPG
LMLGSPRHYMGSPFSATLPGLQALSKPTGKLLHHPQVESLKSEMLLKLSVGGLTLTLLQE
GAQPGQCRSHGPSEDLQISEISKHFFQELGFFKDSMFSSQDFKHLRSHFEKACPYSHVRV
TAAAVQLTCEQKAAGSSAQEVNCDLSFSKLEILECLWSMGNTSRPQYTEVLRFYNQGTFP
FGTAAKPCAQIHYKYAQRKTRKVGLKKPSVKLESEIFIELSEFCLEFDLGVLDRLNTLIL
LFTKADKGDGVPPPNFPENLPSGPNSELTTVHIVSPRGELKLQFPVPDLRPEPKRRPSWH
KEVRKEVLLLEFSELDFRTDINGSGPLRLEIIFSDLHGKYGDASQIVHPCIRVHKMCDPQ
WKGTGKKILIPKIVVTVNPAPVFPDWEGLMEKSTDMDMGTVESPCELRQRESSPFSSKRT
MFETEEMVIPGDPEEMAHFQLKSLSSSQYVVEVTFPSVHFLLPSKDFYESLYNRINNDLL
MWEPSTAFTGGTSSSNIDPLLSENLPYFASQHENFRMCKSAFRLDSDSEEEEAHFCTSDF
PLQRKRAAAHIGNGYSFLSMKVQIGKGRITAMTDSKGENGKKLDNHHGELVLDVEGGTIF
TVSQYKGDPNLSYFCIEGQRVELYHKAVVADSTLPERLEIPHFTPPPHLNPTIYPSEEGV
SCKSAADRRIHELHMLSTAIKINLDLQKNVKEFLVALRLQGATMRHHMAQNYQSWNEQLV
DFLNVMDDPILGYTPPAVITVLHSHLLNCAVDYRPLYLPVRILITAETFTLSSNIIVDTA
TFHLRFILDDSALYLSEKCDAEAVELRKDYVCVLDVDLLELGITTWKGSATGKLSQPLFE
LRCSNNVVHLHTCADSCAMLVNLLQYIVNSGDLHPPPRQDSPTEIAGQKLQMSESPASLP
ACLPAETAEINQYDLTDALLDTEKNQREDTLEAGSPVLLRQGSPVSVYLFPGENQRVSHP
TDNTSGASEMGQELVADPYPSLGSEANSDTDNSTDNDDFCILEAPGIGIPPKDGEPLVSQ
LVPGPISIRDGHFSRPLGSSDLLKAPSRFPVPETRIMLREISVVWHLYGGRDFGGKPTPT
HSTVHSPRVKSGGHTPARSSPSRSAAPPRPQNSWRVQGGGGRSHSMLMEIQLSKVSFQHE
SYPSSSNPPASGEMNELEEQPLARQVFIVQELEVRDRLASSQINKFLYLYTSEKMPRRAH
SNMLTIKALHIRPESGLGGPECCLRVSLMPLRLNIDQDALFFLKDYFTGLAAGINPFLPV
ETAAEVKLDGNLKPGTEFMSRESEAGSSLGVGSPLDMTASMETTASENSSTSASSSSAEQ
PIYFREFRFTSEVPIWLDYQGKHVSIDQVGTFAGILIGLAQLNCSELKLKRLCCRHGLLG
VDKVINYAVNEWVTDIRKNQLPGILGGVGPMHSVVQLFHGLRDLFWLPIEQYRKDGRIIR
GLQRGAASFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPISRAIMDKRYVKRQRR
AQQPADLREGVVKAYDTVREGVIDTAQTICDVATRGHEQKGLPGAVGGVLRQIPPTVVRP
LIVATEATSNLLGGMRNQIKPDARKEDFLKWRTEESQD
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttggctctttccttggtccggctctatcaaaaaacgggcatgtcgctacttg
ctacaacactacctcggtcatttcctgcaagagcgactcagccttgatcaactcagcctg
gacttgtacaacggcagtggggtcatacgagacattcacctcgatgtgtggtcagtgaat
gagcttctggattccatgggtgctccccttgaaattgtggatggattcattgggagcatt
tctgtgacaatcccttgggctgcattagtcaccgataattgcactgtcatagtaaatggc
ctgcagatcacctgccgacctaaataccgcaccactacaggtgtggactcacaatgctgg
tcatcttgcatgacatccagtatgcagcttgcccaagagtgcctaaaggagaccccagag
gaaggagatgaaccacctgctccactggaggggctagaaatgtttgcacagaccattgaa
actgttctgcgcaggattaaagtaacatttttggatgtaattatcagagtggagcacaca
cctcttgtgtcacagtctggggttgccttagaagtgcacattaaaagactggattattgt
gatgaggcagtgaaagatgccagtcaggcagtcccagtggatatccaccaacctcctgct
tttgttcacaaaatactgcagctcagtggagtacagctttattatgagaaactctgcgag
aatcaggagcctatttatctgaatagtgacagtgaagaaattaggcaccctcagtgcccc
ttactaataggaacttgttctggatacatggaaacaacagttaaaatcaaacaaaatgat
gctttacctggcccaaagttggagttagatggcaagatgggctcccttcatctgctgctg
tcaactgatcaaatctttcacttaactgatctgctttcatcactccatgtttacaccgaa
acagcattgcttgtagatggaggaaagagccgcccccttggttctgaggacttgcgcctg
attgaagaggatctaaataaacagcttaatgtagaaagtacagaaactgacaaaggacca
caatcttttaatactatgaactttgataatgcagaaatgttctactcaatggctcctgga
atgggcacctctgtcacatctgtcaatactgttagtgacctctctgaacctgacatggac
tcctctctacacagcgagtacagcagttgtgcttttcaacctcattctttatctcctgga
cttatgcttggtagcccaagacattacatgggatctcccttctccgctactcttcctggt
ttgcaggctttaagtaaacctacagggaaattattgcatcatccacaggtagagagtttg
aaatctgaaatgctccttaaactgtcagttggtggccttaccttaacactgttgcaggag
ggagcccagccaggccagtgcaggtcacatggcccatccgaagacctacagatttcagaa
atatcaaagcatttttttcaagagcttggatttttcaaagatagcatgtttagtagtcaa
gattttaaacatttacgatcacattttgagaaggcctgcccctattcacatgtgagagta
actgctgctgcagttcagttgacctgtgaacagaaggctgctggctcttctgcgcaagaa
gtaaactgtgacctatcatttagcaagctagagatactggagtgtctttggagcatgggg
aacacctcaagaccacagtacactgaggtattacgcttttataaccagggtacctttcca
tttggaactgcagccaagccttgtgcccagattcactacaaatatgcacaacgaaagaca
aggaaggtggggctcaaaaaaccgtcagtaaagctagagagtgaaatttttattgagctt
tctgaattttgcttggagtttgatctaggagttcttgatcggctcaatacactgatcctt
ctattcacaaaagcagataaaggagatggagtgcccccccccaactttcctgagaatttg
ccctctggcccaaactctgagcttacaacagtgcatatagtttctcctcgtggtgaacta
aaacttcagtttcctgttccggatctccgaccagagcctaaacgtagaccctcatggcac
aaggaggtccgtaaagaagttcttctgctggagttctctgaacttgacttcagaactgac
atcaatggaagtggacccttgcgacttgagatcattttctctgatctacatggtaaatat
ggagatgcctcacaaattgttcatccctgcatccgagtccacaaaatgtgtgacccccag
tggaaaggaactggtaaaaaaattctcattccaaagattgtggtgactgtaaacccagca
cctgtgttcccagactgggaaggcctgatggagaagagcactgacatggatatgggcacc
gttgaaagcccttgtgaattgaggcagcgcgaaagttctcctttttcctcaaagaggact
atgtttgagactgaagagatggtaatcccaggggacccagaagagatggcccactttcag
ctgaagtctctttcttcctcccaatatgtggtggaggttacttttcccagtgtgcacttt
ttattacccagtaaagatttctatgagagcctctacaacagaatcaataatgacttgtta
atgtgggagcctagcactgcatttactggaggaacctctagctctaatattgaccctctg
ctttccgagaatttaccctactttgccagtcagcatgaaaatttccggatgtgtaaatcc
gctttcagactagattcagattctgaggaagaagaagcacacttttgcacatcagatttt
ccattacagcgcaagagagcagcagcccatattgggaatggctacagttttctttctatg
aaagttcaaattggaaaaggaaggattactgcaatgacagacagtaagggagaaaatggt
aagaagcttgataatcatcatggagagttagtattggatgttgaaggaggaaccatcttc
accgtatctcagtacaaaggagaccctaatctcagctatttctgcattgaaggacagcgg
gtggagttgtaccacaaggctgtggtagcggactccaccttgcctgagcgattagaaata
cctcatttcactccacctcctcacctgaatcctaccatctacccttcagaggagggggtc
tcatgcaagtcggctgcagacagaagaattcacgagctgcacatgctttcaacagctatt
aaaattaaccttgatctccagaagaatgttaaagaattccttgttgctttaaggctgcaa
ggagcaactatgaggcatcacatggcccagaattatcagagctggaatgaacagctggta
gattttctgaatgtgatggatgaccccattctaggttacactcctcctgctgttataact
gtactacatagccatttgctaaactgtgctgttgactacaggccactgtatcttcctgtt
cgcatccttattacagcagagaccttcaccttgtcaagcaatattatagtggatacagct
acattccacctaaggtttattttggatgactctgctctgtacttatctgagaagtgtgat
gctgaggctgttgaactaagaaaagattatgtatgtgtgctggatgtggatcttttggag
ttaggcatcaccacatggaagggaagtgccacaggaaaactgagccaacccctgtttgaa
cttcgctgctccaataatgttgttcatttgcatacctgcgctgattcgtgtgccatgtta
gtaaatctgctccagtacattgtgaacagtggggacctgcatccacctccacgtcaagac
agtccaactgagattgctggtcagaaacttcagatgtcagaaagtcctgcttctcttcct
gcatgcctgcctgctgaaacagctgagattaaccaatatgaccttactgatgcattactg
gacacagagaagaaccaacgagaggacactttagaagcaggatcaccagttttgctaagg
cagggatcaccagtgtcagtctatctatttcctggtgagaatcagagggtgtctcaccca
actgacaataccagtggtgccagtgaaatgggccaggagttggtggctgacccataccca
tccctaggcagtgaagctaattcagacactgataactccacagacaatgatgatttctgt
attctcgaagcaccaggcattggtataccgccaaaagacggtgagccactggtgtcacag
ttggtaccaggtccgatcagtattagagatgggcatttctcaagacctctgggtagctca
gacctcttgaaagctccatcccgatttccagtgcctgagacacggatcatgctgagggaa
atctcggtggtgtggcacctatatggtggacgagattttgggggcaagccaacacctacc
cactcaactgtgcattcacctagagtgaaatctggtggccatacccctgcccgcagttct
ccttcacgctccgcagcacctcctcgacctcagaattcctggcgagtacaaggtggtggt
ggacgctcccacagcatgctaatggagattcagctcagcaaggtcagctttcagcatgag
tcctaccccagcagctctaatcctcctgcttcaggagaaatgaatgagctggaggagcag
ccattagcacgtcaagtgttcattgtacaggagttagaagttcgggatcggcttgcttcc
tctcaaataaataagtttctctacctctacacaagtgagaagatgccaagaagagcacat
tctaatatgctcacaatcaaggctcttcacattcgtccagagtcaggacttgggggtcca
gaatgctgcttgagagtaagtctcatgcccctgagactaaacattgatcaggatgcactt
ttcttcctgaaggattattttacaggactggcagctggcattaaccctttcttgccagta
gaaacagcagcagaagtaaaattggatggtaaccttaaaccggggacagagtttatgagt
agagagagcgaagcaggttccagtttaggagtggggtcaccgctggacatgacagcgtca
atggaaacaactgccagtgaaaacagctctacttctgcgagttcctcctcagctgaacag
cccatctatttccgggagttccgcttcacatctgaagtgccaatctggttggactatcag
ggcaaacatgtcagcattgatcaggtgggaacctttgctggcattctgataggacttgct
cagttgaactgctccgagctgaaactgaagaggctgtgctgtcgacatggtcttctaggt
gttgacaaagttatcaactatgctgtgaatgagtgggtgacagacatccggaaaaaccaa
ctgccaggaattctaggaggagtgggtcctatgcactcagttgttcagcttttccatgga
cttagagatttattttggttacccatcgaacagtataggaaggatggacgcattatccgt
ggtcttcagagaggagcagcctcttttgggacgtctactgcttcagctgcattggaactc
agtaaccgccttgtacaggccatacaggctacagcagaaacagtttacgatatcctttca
ccaactcctccaatttcccgcgccataatggataagcggtatgtgaaacgtcaaagacga
gctcagcaacctgcagaccttcgagagggcgttgtcaaggcgtatgacactgtgcgagag
ggagtgattgatactgcacagaccatctgtgatgttgctacacgtggacatgagcagaaa
gggctcccgggagctgtaggtggtgtcctgcgacagatcccaccaactgtggtccgtcca
ctcatcgtggccacagaggcaacctccaacctgctgggtggaatgcggaaccagatcaaa
cctgatgcacggaaagaggacttcttaaagtggcgtacagaggagagccaggattga
DBGET
integrated database retrieval system
