Polypterus senegalus (gray bichir): 120533899
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Entry
120533899 CDS
T08668
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120533899 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
psex04030
]
120533899 (smo)
G protein-coupled receptors [BR:
psex04030
]
Frizzled / Smoothened family
120533899 (smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
RhlB
Motif
Other DBs
NCBI-GeneID:
120533899
NCBI-ProteinID:
XP_039616938
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Position
8:complement(40635767..40708940)
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AA seq
816 aa
AA seq
DB search
MSSRGYSFVERFGMFFIFEVLFLIVHMGIAQKNDSVFSDDCKKTTTCEVLKYNTCLGSPL
PYTYTSVILAEDSSSQEDASEKLAMWSGLRNAPRCWDVIQPLLCSVYMPKCENGKVELPS
KSLCQITRRPCAIVERERGWPDFLKCSSSNFPVGCHTEVQNIKFNSSGHCEAPLVRTDNP
SSWYEDVEGCGIQCQNPLFTMDEHQDMHTYIAIFGSITIFCTFFTLATFLVDWKNSNRYP
AVIVFYVNACFFIGSIGWLAQFMDGARNEIVCKADGTMRLGEPTSTETLSCVIIFVIVYY
SLMSGVIWFVMLTYAWHTFFKALGTTYQPLSGKTSYFHLVTWSIPFVLTVAILAIAQVDG
DSVSGICFVGYKNYRYRAGFVLAPIGLVLMVGGYFLIRGVMTLFSIKSNHPGLLSEKAAS
KITETMVRLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFRDYVLCEANVTIAVQFKKP
IPDCTIKNRPSLLVEKINLFAMFGTGISMSTWVWTKATILIWKRTWCRIIGRSDDEPKRI
KKSKMIAKAFAKRKELLNNPEKELSFSVQTVSHDCPVAGLNLDMNEPSIEMSSAWAQHVP
KMVARRGAILPQDISVTVSGTPVPPEDNKDMWIVEAEIPPDPHKRKKKKRRRKQDARPVG
CVEEKAYNTHQASSKIPRLPRLPGQTNLVAHPCEVLASEDTLPGSFPEYQSALPPPYAEM
APNQIFSSYYDCREHRTVNTLSDKDPRFVNSSCFQHTQKQYSRMFHPYPKDLGPAILPVG
ANSHMPRTQGRRTGLAPIHSRTNLMDAELMDADSDF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccgaggatattcctttgttgaaagattcgggatgttctttattttcgaagtt
ttatttctgatcgtccatatgggaatagcccagaaaaacgacagtgtattttcagatgac
tgcaagaagacaacaacttgtgaagttttaaagtataatacatgcctcggctcaccgctg
ccttacacgtacacttctgtaatcctagccgaagattccagttctcaggaggatgcctcc
gagaagctggcaatgtggtcgggtttgagaaatgcgcctcgctgctgggatgtcattcag
cccctgctctgctcagtctatatgcccaaatgtgagaatggaaaggtagaactccccagc
aagagcttatgccaaataacaagacgtccatgtgctattgtggaacgagagagaggatgg
ccagactttctgaagtgttcatcttccaattttccagttggatgtcatacagaagtacag
aatattaaatttaacagctctggccattgtgaggctcccctcgtgaggactgataatcct
agcagctggtatgaggatgtcgaaggctgtggtattcagtgtcagaaccctttgttcact
atggatgaacatcaggatatgcatacatacattgccatctttggatctataaccatattt
tgtaccttttttacattggccacatttctagttgactggaagaattcaaaccgttatcct
gctgttattgtattttatgttaatgcctgtttcttcattgggagcattggctggctggcc
cagttcatggatggagcccggaatgaaattgtatgtaaagcagatgggacaatgagacta
ggagaaccaacgtctactgaaaccctttcctgtgtaattatctttgtaattgtgtactac
tcattaatgtctggggtcatctggtttgtcatgttgacctatgcatggcatacctttttc
aaagctcttggtacaacttaccaacccctgtctggaaaaacatcttacttccatcttgtg
acatggtccatcccatttgtgcttacagtggcaatactagcaatagctcaggttgatgga
gattctgttagtggaatctgctttgttggatataagaactaccgctatagagcaggcttt
gttttggcaccaattggtcttgtgttgatggttgggggctactttctcatacgaggtgtt
atgacactcttctccattaaaagtaaccatcctggtcttttaagtgaaaaggctgctagc
aaaattacagaaacaatggtccgactaggtatatttgggtttcttgcctttggctttgtt
tttatcacttttggctgccatttttatgatttttttaaccaagcagaatgggaaagaagt
tttagagattatgtcttgtgtgaagcaaatgtcactatagctgttcagtttaagaagcca
attcctgattgcacaatcaagaacaggcccagcctcctggtggagaagataaaccttttt
gctatgtttggtacaggcatctctatgagcacgtgggtgtggactaaagctactatacta
atatggaaacgaacctggtgcagaattattggtcgtagtgatgacgagcctaaaaggatt
aagaagagtaaaatgattgctaaggcttttgccaagcgtaaagagttactgaataaccca
gagaaggagctttcattcagcgtacaaactgtctcccatgactgccctgttgctggattg
aacttggatatgaatgagccatctatagaaatgtcatctgcctgggctcagcatgtaccc
aaaatggttgctcggcgaggggccattttgcctcaggatatctcagttacagtttcagga
acacctgtgccaccagaggacaataaagacatgtggattgtggaagcagagattcctcct
gatcctcataagaggaaaaagaaaaagcgaaggaggaaacaggatgctcgtcctgttgga
tgtgtagaagaaaaggcctataatacacatcaggcttccagtaaaatccctcgtcttcca
agactgccaggacagactaaccttgtagcccatccctgtgaagtgctagcctcagaagac
actcttcctggttccttcccagagtatcagtctgcacttcctccaccatatgcagaaatg
gcacccaaccagatcttcagcagctactatgactgcagagaacacagaactgtaaataca
ttatctgataaggaccccagatttgttaacagcagttgttttcaacatactcaaaagcag
tacagtaggatgtttcacccttatcctaaggatttagggcctgccatcttacctgtgggg
gcaaactctcacatgccaagaactcaagggagaagaactggtcttgcaccaattcactca
aggactaatctaatggatgctgaattaatggatgcagactctgacttctga
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