KEGG   Polypterus senegalus (gray bichir): 120533961
Entry
120533961         CDS       T08668                                 
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
  KO
K05636  laminin, beta 1
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04510  Focal adhesion
psex04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:psex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120533961 (lamb1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120533961 (lamb1a)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C ATG17_like EF1_GNE
Other DBs
NCBI-GeneID: 120533961
NCBI-ProteinID: XP_039617053
LinkDB
Position
8:58487141..58572280
AA seq 1781 aa
MWIFELAFLVGVWLTVSAQGPEFSYGCAEGSCYPATGDLLIGRADQLSATSTCGLHRPEP
FCIVSHLQEEKKCFVCDSTVVYDENVNHTNSHRIENVVTTFAPNRLKTWWQSENGLENVT
IQLDLEAEFHFTHLIMTFKTFRPASMLIERSSDFGHTWQVYRYFAYDCESSFPSVSHGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNMLKITNLRIVFKKLHT
LGDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGNEVLVEGMVHGHCMCRH
HTKGLNCELCDDFYHDLPWRPAEGRNSNACKKCNCNEHSNRCHFDMAVYMSTGNVSGGVC
DDCQHNTMGHNCEQCKPFFFRHTERNLRDPNICEPCDCDPLGSLNGGICDRHTDFTTGLI
AGQCRCKPNVEGERCDRCKEGYYDLSDDPLGCQPCTCNPLGTHPGGNPCSADTGDCYCKS
HVTGKNCDQCVPEHWGLSNDLEGCRPCDCDLGGAFNNDCSPDSGQCECRDHMFGRQCNDV
ESGFYFIALDHYTYEAEEANFGPGLSIVQRPYPQDRLPTWTGPGFAYVPEGGYLEFYINN
IPYSMEYDILIRYEPQLPETWEEAVITVVRPGIISTSSRCGNTMPDDDRQVVSLPPGSRY
VVLPRPVCFEQGLNYTVRLELPLYSSSNDGQSPYMLIDSLVLMPHCKTLEIFTGNGGGVV
TNSAWDTFQRYRCLENSQSVVKTQMTDICKKIIFSISALLHEGALSCECDPQGSVSALCN
PNGGQCQCRPNVVGRNCDKCAPATYLFGPSGCRPCECNSQGSINPFCHHETGQCQCIEGA
YGRQCERCLPGYWGFPNCQPCNCNGHTDHCDPHTGACIGCRDHTTGHHCQRCLNGYYGDP
VLGSGDHCRPCLCPDGPHSGRQFANDCYQNTESEQVVCACNPGYTGVRCDQCTPGYYGNP
DVTGGACQPCQCNNNIDMLDPDSCDIRTGLCLKCLYHTEGESCERCMLGYFGDAVNHSCR
KCACNYLGTANETCPSNSECHCNRDSGQCQCLPNVIGQNCDQCALDTWNLASGEGCESCN
CHETHSFSSSCNELTGQCSCKPGFGGRTCSNCQELFWGDPEVECKACDCEPNGIDTPQCD
RIHGHCSCREGVAGVRCDKCARGYSGIFPDCVKCHQCFAEWDVIVADLTNKTHHLVEKVN
SVKASGVIGPYQEKVDKMEQNLNDIRSFLAQNPAAQPLSDIERLLEESQKLITEVSQKLN
ATELQLDSVSSDNNGTDLEREILQADAENLNKTVKELSDQLEFVKNSDIRGALDSISKYF
QESKDAESRANASTTDPGSVVEQSSAVRQQTEMIMNETGSEFVENQKEYAQKLDDLAAEL
ETLDLSELSEKTCGQTAGGPCSEEKCGGLSCRNEDGSMKCGGEGCDGLVTLAHSAWKKTM
DFDREILSALAEVDKLSKMVSEAKVKTDEAKLNAQEVLEKANATKQKIDRTNEDLRNLIK
QIREFLTQDGADLESIEAVANEVLKMQMPTTPEQLKMLTDEIQERVESLSDVEDILNQSA
DDIHRAESLLAEAKKASNEATDVKNKAILVKEALEEAEKAQNAAERAIKQAEIDIGGTHN
LLTSIKNETMASESTLNNATERIAKLEKDIDNLIQKATNNSIAAEDIDKVIMQVNQDAEA
AKKELDNDLKNKYDDVEGLISEKFQGIASAKTRAELLQNEAKDLLTQASGKLQLLKDLEK
KYEDNQRILEDKAEQLSRLEEDVRLLLQSISQKAAVYSTCF
NT seq 5346 nt   +upstreamnt  +downstreamnt
atgtggatatttgagctcgctttccttgtcggtgtgtggttaacggtgagtgcccaggga
cctgaattcagctatggctgcgccgagggaagctgctatcctgccaccggcgacctcctg
attggccgtgctgaccaactatcagccacatctacttgtggtctccatcgaccggaacct
ttctgcatcgtcagccacctacaggaagaaaagaaatgttttgtctgtgattcaactgtg
gtgtatgatgagaatgtaaaccatacaaacagccaccgcattgaaaatgtcgtcacaaca
tttgctcccaaccgactgaagacatggtggcagtctgaaaatggtttggaaaatgtcact
attcaactcgatctggaggctgaatttcatttcacccatctcattatgacattcaagact
ttccgccctgcctccatgctgattgaaaggtcttctgattttgggcatacttggcaggtg
taccgctattttgcatatgactgtgaatcatcctttccaagtgtttctcatggacctatg
aagaaagtagatgatatcatctgtgactcacgctattcggacattgagccatctacagaa
ggagaggtcatctatcgagtgcttgatcccgcatttagaattgaagatccctatagtccc
agaattcagaacatgctaaaaatcacaaacttgaggattgtgttcaagaagctgcatacc
ttgggtgataacttactagactccaggatcgaaattaaggaaaagtactattatgcaatc
tatgacatggttgttcgaggtaactgcttctgctatggacacgccagtgaatgcgctcct
gttgatggaaatgaagttcttgtggaaggaatggtgcatggtcattgcatgtgcaggcac
cacaccaaaggtttaaactgtgaactttgtgacgatttctatcatgatcttccctggagg
ccagctgagggacggaatagtaatgcgtgcaaaaagtgtaactgtaatgaacattcgaac
agatgtcactttgatatggctgtgtatatgtcaacggggaatgtcagtgggggtgtatgt
gatgattgccagcacaacaccatgggtcataactgcgaacaatgcaaaccattctttttc
cggcatacagagagaaatctccgtgaccccaacatctgtgagccgtgtgactgtgaccct
cttggctctctgaatggtggaatttgtgatcgtcacactgatttcacaactggccttatt
gctggacagtgccgttgtaaaccaaatgttgagggggagcgttgtgacaggtgtaaagag
ggttactatgacttgagtgatgacccattaggatgtcaaccttgtacttgtaatcccctg
ggaactcaccctggaggaaatccttgcagcgcagacaccggagactgttattgtaaaagt
catgtgacagggaagaattgtgatcagtgtgtacctgaacattggggactaagcaatgat
ctggaaggatgcagaccttgtgactgtgacctgggtggtgccttcaataatgattgttca
ccagattctggacagtgcgagtgtcgagatcacatgtttggaaggcaatgcaatgatgtt
gaatctggcttttactttattgcccttgaccattatacgtatgaagcagaagaagccaac
tttggtccaggactaagcatagttcagagaccctacccacaagaccgcttaccaacttgg
acaggacctggatttgcatatgtaccagagggaggctacttggagttttatattaataat
attccttactcaatggagtacgatattttgattcgctatgaaccacagttaccagagaca
tgggaagaagccgtgataactgtagtccgcccaggcatcatttctactagcagcagatgt
ggaaacacaatgcctgatgatgacagacaagttgtgtctttacctccaggctccagatat
gtagtgttgccaaggcctgtatgcttcgaacaaggactgaattatactgtccgcttggaa
ttgccactgtattcttcttcaaatgatggccagtctccttacatgctgatagattctctt
gtcctcatgcctcactgtaaaactttggaaatatttactggtaatggtggtggtgttgtc
acaaacagtgcttgggataccttccagagatatcgctgtctagagaacagccagagtgtg
gtaaaaacccaaatgactgacatctgtaaaaagatcatctttagtatttccgcccttctc
catgagggtgcattatcatgtgagtgtgatcctcaaggttctgttagtgcactgtgcaat
ccaaatggtggccagtgccagtgtcgaccaaacgtggtgggaagaaattgtgacaagtgt
gccccagctacctatcttttcgggccttctggttgcagaccttgtgaatgcaattcccaa
ggttctattaaccctttttgccaccatgaaacgggacagtgccaatgcattgaaggagcc
tatggtcgtcagtgtgaaagatgcctaccaggatactggggttttcctaactgccaaccc
tgtaattgtaatgggcatacagaccactgtgatcctcacactggggcatgtattggctgt
agggatcatacaactggccatcactgccaaaggtgtttgaatggttactatggtgatcca
gttcttggttctggggatcactgtcggccctgcctatgtccagatggccctcacagtgga
cgtcagtttgctaacgactgctaccagaacacagagtctgaacaggtggtctgcgcctgt
aacccagggtacacaggtgtcagatgtgaccaatgtactccaggctactatggcaaccct
gatgtaacaggaggagcatgtcagccatgtcagtgtaacaacaacattgacatgctggac
ccagactcttgtgacatacgcacaggtttgtgcctgaaatgtctctaccacacagaagga
gaaagctgtgaacgttgtatgcttggctatttcggagatgcagtaaaccacagttgtaga
aagtgtgcatgtaattatttgggcacagcaaatgaaacatgtccatcaaacagcgaatgc
cactgtaaccgtgacagcgggcagtgccaatgccttccaaatgtgattggtcaaaactgc
gatcaatgtgcactggatacctggaatctggctagtggtgaaggatgtgaatcttgcaat
tgccatgaaacacattcatttagctcatcctgcaatgagttgacaggtcagtgttcgtgc
aagccaggatttggagggcggacatgcagcaactgtcaagagctcttctggggtgaccct
gaagtggagtgtaaagcttgtgactgtgaaccaaatggtattgacacacctcagtgtgac
cgcatccatggacactgttcttgcagggaaggcgttgctggtgtcagatgtgacaagtgt
gcaagaggctattctggaatatttccagactgtgtaaagtgtcatcagtgttttgctgag
tgggatgtcatcgttgctgacttaaccaacaagactcaccacctagtggaaaaagtgaac
tctgttaaagccagtggagttataggaccataccaggagaaagtggataaaatggagcaa
aatttaaatgacatcagaagcttcttagcacaaaatcctgcagcacaaccactaagtgat
attgaaaggctattggaagagtctcaaaaactgatcacagaggtctctcagaagttgaat
gccactgaactgcagcttgattctgtttcatctgataataatggaacagatcttgagcgg
gaaatccttcaggcggatgctgaaaacttaaacaaaacagtaaaggagctttccgatcaa
ctggaatttgttaaaaattcagatattagaggtgctttagacagtattagcaaatacttc
caggaatcaaaagatgccgagtcaagggcaaatgcttccactactgaccctgggagtgtt
gttgaacaatcctcggcagttcgtcagcaaactgaaatgataatgaatgaaacagggtct
gagtttgtggaaaaccaaaaggaatatgcccaaaaactagatgatctggctgctgaactg
gagacattggacttgtcagaactgagtgaaaagacatgtgggcagacagctggagggcca
tgctcagaagaaaaatgtggaggactgagctgcaggaatgaagatggctccatgaaatgt
ggaggcgaaggctgtgatggcttagtgactttggctcacagtgcctggaagaagactatg
gattttgatagagaaattctcagcgcattagcagaagttgataagctttctaaaatggtg
tctgaggcaaaggtcaaaacagatgaagcaaaactaaacgctcaggaagttcttgagaaa
gcaaatgcgaccaagcagaaaattgacagaaccaatgaagacctgaggaatctcatcaag
cagatccgggaattccttacacaggacggagcagatcttgaaagcattgaagcagttgct
aatgaagttttaaaaatgcaaatgcccacaacacctgagcaactgaagatgttgacagac
gagatacaagaacgagtggagagtttatcagatgtggaggatatccttaaccagagtgct
gacgatattcatcgtgcagaatccttgcttgctgaagctaagaaagctagcaatgaagca
acagatgtgaagaacaaagccattctagtgaaagaagctttggaggaggcagaaaaagcc
caaaatgctgcggagagagcaattaaacaagcagaaattgatatcggtgggactcataac
ctcctgacctcaataaaaaatgagacaatggcttctgaaagcacattaaacaatgcaact
gagagaattgctaagttggaaaaggatattgataacctaatacagaaagccacaaacaac
agtattgcggctgaagatatagataaagtaataatgcaagtcaatcaagatgcagaggca
gccaaaaaggagcttgacaatgacctgaaaaataagtacgatgatgtagaaggtctaatt
tcagagaaatttcaaggcattgcaagtgcaaaaacgagggcagaactgctacaaaacgag
gctaaagatctgttgacacaagccagtggtaaactacagctactgaaagatttagagaaa
aaatatgaagacaatcaaagaatcttagaagataaagcagaacagttatcaaggctagaa
gaggatgtacgtctgctattgcagtctatcagccagaaagctgctgtttatagtacctgt
ttttaa

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