Polypterus senegalus (gray bichir): 120533961
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Entry
120533961 CDS
T08668
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04510
Focal adhesion
psex04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120533961 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120533961 (lamb1a)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
EF1_GNE
Motif
Other DBs
NCBI-GeneID:
120533961
NCBI-ProteinID:
XP_039617053
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Position
8:58487141..58572280
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AA seq
1781 aa
AA seq
DB search
MWIFELAFLVGVWLTVSAQGPEFSYGCAEGSCYPATGDLLIGRADQLSATSTCGLHRPEP
FCIVSHLQEEKKCFVCDSTVVYDENVNHTNSHRIENVVTTFAPNRLKTWWQSENGLENVT
IQLDLEAEFHFTHLIMTFKTFRPASMLIERSSDFGHTWQVYRYFAYDCESSFPSVSHGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNMLKITNLRIVFKKLHT
LGDNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGNEVLVEGMVHGHCMCRH
HTKGLNCELCDDFYHDLPWRPAEGRNSNACKKCNCNEHSNRCHFDMAVYMSTGNVSGGVC
DDCQHNTMGHNCEQCKPFFFRHTERNLRDPNICEPCDCDPLGSLNGGICDRHTDFTTGLI
AGQCRCKPNVEGERCDRCKEGYYDLSDDPLGCQPCTCNPLGTHPGGNPCSADTGDCYCKS
HVTGKNCDQCVPEHWGLSNDLEGCRPCDCDLGGAFNNDCSPDSGQCECRDHMFGRQCNDV
ESGFYFIALDHYTYEAEEANFGPGLSIVQRPYPQDRLPTWTGPGFAYVPEGGYLEFYINN
IPYSMEYDILIRYEPQLPETWEEAVITVVRPGIISTSSRCGNTMPDDDRQVVSLPPGSRY
VVLPRPVCFEQGLNYTVRLELPLYSSSNDGQSPYMLIDSLVLMPHCKTLEIFTGNGGGVV
TNSAWDTFQRYRCLENSQSVVKTQMTDICKKIIFSISALLHEGALSCECDPQGSVSALCN
PNGGQCQCRPNVVGRNCDKCAPATYLFGPSGCRPCECNSQGSINPFCHHETGQCQCIEGA
YGRQCERCLPGYWGFPNCQPCNCNGHTDHCDPHTGACIGCRDHTTGHHCQRCLNGYYGDP
VLGSGDHCRPCLCPDGPHSGRQFANDCYQNTESEQVVCACNPGYTGVRCDQCTPGYYGNP
DVTGGACQPCQCNNNIDMLDPDSCDIRTGLCLKCLYHTEGESCERCMLGYFGDAVNHSCR
KCACNYLGTANETCPSNSECHCNRDSGQCQCLPNVIGQNCDQCALDTWNLASGEGCESCN
CHETHSFSSSCNELTGQCSCKPGFGGRTCSNCQELFWGDPEVECKACDCEPNGIDTPQCD
RIHGHCSCREGVAGVRCDKCARGYSGIFPDCVKCHQCFAEWDVIVADLTNKTHHLVEKVN
SVKASGVIGPYQEKVDKMEQNLNDIRSFLAQNPAAQPLSDIERLLEESQKLITEVSQKLN
ATELQLDSVSSDNNGTDLEREILQADAENLNKTVKELSDQLEFVKNSDIRGALDSISKYF
QESKDAESRANASTTDPGSVVEQSSAVRQQTEMIMNETGSEFVENQKEYAQKLDDLAAEL
ETLDLSELSEKTCGQTAGGPCSEEKCGGLSCRNEDGSMKCGGEGCDGLVTLAHSAWKKTM
DFDREILSALAEVDKLSKMVSEAKVKTDEAKLNAQEVLEKANATKQKIDRTNEDLRNLIK
QIREFLTQDGADLESIEAVANEVLKMQMPTTPEQLKMLTDEIQERVESLSDVEDILNQSA
DDIHRAESLLAEAKKASNEATDVKNKAILVKEALEEAEKAQNAAERAIKQAEIDIGGTHN
LLTSIKNETMASESTLNNATERIAKLEKDIDNLIQKATNNSIAAEDIDKVIMQVNQDAEA
AKKELDNDLKNKYDDVEGLISEKFQGIASAKTRAELLQNEAKDLLTQASGKLQLLKDLEK
KYEDNQRILEDKAEQLSRLEEDVRLLLQSISQKAAVYSTCF
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgtggatatttgagctcgctttccttgtcggtgtgtggttaacggtgagtgcccaggga
cctgaattcagctatggctgcgccgagggaagctgctatcctgccaccggcgacctcctg
attggccgtgctgaccaactatcagccacatctacttgtggtctccatcgaccggaacct
ttctgcatcgtcagccacctacaggaagaaaagaaatgttttgtctgtgattcaactgtg
gtgtatgatgagaatgtaaaccatacaaacagccaccgcattgaaaatgtcgtcacaaca
tttgctcccaaccgactgaagacatggtggcagtctgaaaatggtttggaaaatgtcact
attcaactcgatctggaggctgaatttcatttcacccatctcattatgacattcaagact
ttccgccctgcctccatgctgattgaaaggtcttctgattttgggcatacttggcaggtg
taccgctattttgcatatgactgtgaatcatcctttccaagtgtttctcatggacctatg
aagaaagtagatgatatcatctgtgactcacgctattcggacattgagccatctacagaa
ggagaggtcatctatcgagtgcttgatcccgcatttagaattgaagatccctatagtccc
agaattcagaacatgctaaaaatcacaaacttgaggattgtgttcaagaagctgcatacc
ttgggtgataacttactagactccaggatcgaaattaaggaaaagtactattatgcaatc
tatgacatggttgttcgaggtaactgcttctgctatggacacgccagtgaatgcgctcct
gttgatggaaatgaagttcttgtggaaggaatggtgcatggtcattgcatgtgcaggcac
cacaccaaaggtttaaactgtgaactttgtgacgatttctatcatgatcttccctggagg
ccagctgagggacggaatagtaatgcgtgcaaaaagtgtaactgtaatgaacattcgaac
agatgtcactttgatatggctgtgtatatgtcaacggggaatgtcagtgggggtgtatgt
gatgattgccagcacaacaccatgggtcataactgcgaacaatgcaaaccattctttttc
cggcatacagagagaaatctccgtgaccccaacatctgtgagccgtgtgactgtgaccct
cttggctctctgaatggtggaatttgtgatcgtcacactgatttcacaactggccttatt
gctggacagtgccgttgtaaaccaaatgttgagggggagcgttgtgacaggtgtaaagag
ggttactatgacttgagtgatgacccattaggatgtcaaccttgtacttgtaatcccctg
ggaactcaccctggaggaaatccttgcagcgcagacaccggagactgttattgtaaaagt
catgtgacagggaagaattgtgatcagtgtgtacctgaacattggggactaagcaatgat
ctggaaggatgcagaccttgtgactgtgacctgggtggtgccttcaataatgattgttca
ccagattctggacagtgcgagtgtcgagatcacatgtttggaaggcaatgcaatgatgtt
gaatctggcttttactttattgcccttgaccattatacgtatgaagcagaagaagccaac
tttggtccaggactaagcatagttcagagaccctacccacaagaccgcttaccaacttgg
acaggacctggatttgcatatgtaccagagggaggctacttggagttttatattaataat
attccttactcaatggagtacgatattttgattcgctatgaaccacagttaccagagaca
tgggaagaagccgtgataactgtagtccgcccaggcatcatttctactagcagcagatgt
ggaaacacaatgcctgatgatgacagacaagttgtgtctttacctccaggctccagatat
gtagtgttgccaaggcctgtatgcttcgaacaaggactgaattatactgtccgcttggaa
ttgccactgtattcttcttcaaatgatggccagtctccttacatgctgatagattctctt
gtcctcatgcctcactgtaaaactttggaaatatttactggtaatggtggtggtgttgtc
acaaacagtgcttgggataccttccagagatatcgctgtctagagaacagccagagtgtg
gtaaaaacccaaatgactgacatctgtaaaaagatcatctttagtatttccgcccttctc
catgagggtgcattatcatgtgagtgtgatcctcaaggttctgttagtgcactgtgcaat
ccaaatggtggccagtgccagtgtcgaccaaacgtggtgggaagaaattgtgacaagtgt
gccccagctacctatcttttcgggccttctggttgcagaccttgtgaatgcaattcccaa
ggttctattaaccctttttgccaccatgaaacgggacagtgccaatgcattgaaggagcc
tatggtcgtcagtgtgaaagatgcctaccaggatactggggttttcctaactgccaaccc
tgtaattgtaatgggcatacagaccactgtgatcctcacactggggcatgtattggctgt
agggatcatacaactggccatcactgccaaaggtgtttgaatggttactatggtgatcca
gttcttggttctggggatcactgtcggccctgcctatgtccagatggccctcacagtgga
cgtcagtttgctaacgactgctaccagaacacagagtctgaacaggtggtctgcgcctgt
aacccagggtacacaggtgtcagatgtgaccaatgtactccaggctactatggcaaccct
gatgtaacaggaggagcatgtcagccatgtcagtgtaacaacaacattgacatgctggac
ccagactcttgtgacatacgcacaggtttgtgcctgaaatgtctctaccacacagaagga
gaaagctgtgaacgttgtatgcttggctatttcggagatgcagtaaaccacagttgtaga
aagtgtgcatgtaattatttgggcacagcaaatgaaacatgtccatcaaacagcgaatgc
cactgtaaccgtgacagcgggcagtgccaatgccttccaaatgtgattggtcaaaactgc
gatcaatgtgcactggatacctggaatctggctagtggtgaaggatgtgaatcttgcaat
tgccatgaaacacattcatttagctcatcctgcaatgagttgacaggtcagtgttcgtgc
aagccaggatttggagggcggacatgcagcaactgtcaagagctcttctggggtgaccct
gaagtggagtgtaaagcttgtgactgtgaaccaaatggtattgacacacctcagtgtgac
cgcatccatggacactgttcttgcagggaaggcgttgctggtgtcagatgtgacaagtgt
gcaagaggctattctggaatatttccagactgtgtaaagtgtcatcagtgttttgctgag
tgggatgtcatcgttgctgacttaaccaacaagactcaccacctagtggaaaaagtgaac
tctgttaaagccagtggagttataggaccataccaggagaaagtggataaaatggagcaa
aatttaaatgacatcagaagcttcttagcacaaaatcctgcagcacaaccactaagtgat
attgaaaggctattggaagagtctcaaaaactgatcacagaggtctctcagaagttgaat
gccactgaactgcagcttgattctgtttcatctgataataatggaacagatcttgagcgg
gaaatccttcaggcggatgctgaaaacttaaacaaaacagtaaaggagctttccgatcaa
ctggaatttgttaaaaattcagatattagaggtgctttagacagtattagcaaatacttc
caggaatcaaaagatgccgagtcaagggcaaatgcttccactactgaccctgggagtgtt
gttgaacaatcctcggcagttcgtcagcaaactgaaatgataatgaatgaaacagggtct
gagtttgtggaaaaccaaaaggaatatgcccaaaaactagatgatctggctgctgaactg
gagacattggacttgtcagaactgagtgaaaagacatgtgggcagacagctggagggcca
tgctcagaagaaaaatgtggaggactgagctgcaggaatgaagatggctccatgaaatgt
ggaggcgaaggctgtgatggcttagtgactttggctcacagtgcctggaagaagactatg
gattttgatagagaaattctcagcgcattagcagaagttgataagctttctaaaatggtg
tctgaggcaaaggtcaaaacagatgaagcaaaactaaacgctcaggaagttcttgagaaa
gcaaatgcgaccaagcagaaaattgacagaaccaatgaagacctgaggaatctcatcaag
cagatccgggaattccttacacaggacggagcagatcttgaaagcattgaagcagttgct
aatgaagttttaaaaatgcaaatgcccacaacacctgagcaactgaagatgttgacagac
gagatacaagaacgagtggagagtttatcagatgtggaggatatccttaaccagagtgct
gacgatattcatcgtgcagaatccttgcttgctgaagctaagaaagctagcaatgaagca
acagatgtgaagaacaaagccattctagtgaaagaagctttggaggaggcagaaaaagcc
caaaatgctgcggagagagcaattaaacaagcagaaattgatatcggtgggactcataac
ctcctgacctcaataaaaaatgagacaatggcttctgaaagcacattaaacaatgcaact
gagagaattgctaagttggaaaaggatattgataacctaatacagaaagccacaaacaac
agtattgcggctgaagatatagataaagtaataatgcaagtcaatcaagatgcagaggca
gccaaaaaggagcttgacaatgacctgaaaaataagtacgatgatgtagaaggtctaatt
tcagagaaatttcaaggcattgcaagtgcaaaaacgagggcagaactgctacaaaacgag
gctaaagatctgttgacacaagccagtggtaaactacagctactgaaagatttagagaaa
aaatatgaagacaatcaaagaatcttagaagataaagcagaacagttatcaaggctagaa
gaggatgtacgtctgctattgcagtctatcagccagaaagctgctgtttatagtacctgt
ttttaa
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integrated database retrieval system