Polypterus senegalus (gray bichir): 120534003
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Entry
120534003 CDS
T08668
Name
(RefSeq) sortilin-like isoform X1
KO
K12388
sortilin
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120534003
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
120534003
NCBI-ProteinID:
XP_039617136
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Position
8:66592954..66722394
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AA seq
838 aa
AA seq
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MCMRVSATRDSAPPLLFTDTRRAGLKGAGLTSLCCGFGGSAKMTPRLLLATLSVLGTLAA
ADAIFGQREATDARFRIFRRTRAKREASKDNNTTAARGTSLCVRAVEAAVLESLQRNTHL
HEFTEDYGSSIILSWVGDGTGIILAFTTHSPSLSWLFSMSSKLYRSEDSGKTFKDISDVI
GNANLEQNFGINVGPGNSKRVILTSFMQVDERHVGKLFMSSDSGIHFDAVELAFLPAQQI
VYHSNPDYLLVTCSNDNLWLSLNFGKQWTKIHDNVQNFAWGPGITIFFSTHPGGVKIDRK
GALFLKRTEDLGKTFTIISNNMYSFGFTGRFLFTSNVEKLGEPRVIYVSSDQGDNFNQAQ
LPSATDEQFYSVLQADEEMIFMHVDDEGDSDFGTIYTSDDRGILYSKSLERHMFARNGKN
DFTNVTSLRGVYLTNAVAEDGNIKTVITYDRGGEWSPLKKPVGVECAANEEKCNLHIHGE
YSKYKNLVPMLPLSDPSAVGLIIAHGSVGASITSIGPDVYVSDDGGYTWLKALEGPHHYA
LLDSGGIIVAVEQRRELPVKTMKFSTDEGQCWNLYNFTDEPIYFAGLASEPGTKTMNVSI
WGYREVEYNNYVWVSITVDFEELLSRDCQEDDYVKWLAHSTDNDEETSAENGCILGYKET
YQRLKKNSVCRNGRDYIVAKEQSSCQCTKFDYLCDYGYFRQENTSDCIEDPSLKNKELEF
CFQGNEEQLKTSGYRRVPGDRCEGGFSPLRSEQKLSSKCEKAQKSKDMTVVTVVSAVILV
LALVGGITLIMKKYVCGGRSLIYRYSALQQRDDETCIIADANNTDRTFHDDSDEDLIE
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatgcgggtgagcgccaccagggactcggcgccacctcttttgtttactgacacc
agacgagcaggtttgaaaggagccggtttaacgtctttgtgttgcggctttggaggttca
gcaaagatgacacctcgactgctgctcgcaactttgagcgtgcttgggacactcgccgcg
gcggatgcgatattcgggcaacgtgaggcgacggacgccaggtttcggatcttcaggagg
acgagggcgaagcgcgaggctagcaaggacaacaacacgacggcagcacgaggcacctcc
ctgtgcgtgcgagctgtcgaggcggcggtcttggagagcctgcaacgcaacactcacctg
cacgagttcacagaagactatggttcatctatcattctgtcatgggttggagatggaact
ggaattattctggccttcacaactcacagtccttcattatcttggcttttttcgatgtct
tccaaactttacagaagtgaggattctggaaaaaccttcaaagatatatctgatgttatt
ggaaatgctaacttggaacaaaactttggcattaatgtgggacctgggaattcaaaacgg
gtaattctgacatcatttatgcaagtagatgaaaggcatgtaggcaagctgttcatgtct
tcagactctgggatacattttgatgcagtggagcttgctttccttcctgcacagcaaatt
gtctaccactctaatccagattacctgctggtcacttgcagtaatgataatttatggctt
tctctcaactttggaaagcaatggacaaaaatacatgacaatgtgcagaattttgcttgg
ggacccggaattacaattttttttagtactcatcctggtggtgtaaaaattgatcgaaaa
ggagcattgttcctgaaaaggacagaagatctgggaaaaacattcaccattatctcaaac
aatatgtattcattcggatttacgggtcgttttctatttacttcaaatgttgaaaagctg
ggtgagcccagagttatttatgtttcttcagaccaaggagacaactttaaccaagcccag
ctaccatcagcaacagatgaacagttttactctgtgctccaagcagacgaagaaatgatt
ttcatgcatgtagatgatgaaggagattctgactttggtacaatttatacatcagatgat
cgtggtatactgtactcaaagtcattggaacgacacatgtttgcaagaaatgggaaaaat
gactttacaaatgtcacttctttacgaggagtttatcttacaaatgctgtggctgaagat
ggaaacattaaaacagtcataacatatgatagaggaggagagtggtcacctttaaaaaaa
ccagttggagtggaatgtgcagctaacgaagaaaagtgtaatcttcatattcatggcgaa
tacagcaagtataaaaacttggttccaatgctacctttgtctgatccaagtgcagttggt
ttgattattgctcatggtagtgttggggcttctattacatctattggaccagatgtttat
gtttctgatgatggaggctacacgtggttaaaagcactggaaggcccccatcattatgca
cttcttgattctggaggtatcattgtagctgttgagcaacgcagagaacttccagtcaaa
acaatgaagttttctactgatgaaggacagtgctggaatttatacaattttacagatgaa
ccgatttattttgctggccttgcttctgaacctggaacaaaaacaatgaatgttagcata
tggggatatagagaagttgaatacaataattatgtgtgggtgtccattactgtcgacttt
gaggagctgctttcaagagactgtcaggaggatgactatgtcaagtggttagcacattcc
acagataatgatgaagaaacttcagctgagaatggatgcatccttgggtataaagaaaca
tatcaaaggctgaagaaaaactctgtatgtagaaatggcagggattacattgtggcaaaa
gaacagagtagttgccagtgtacaaagtttgactatttgtgtgattatggttattttcgc
caagaaaatacatctgattgcattgaagatcccagcttgaaaaataaggagcttgaattt
tgtttccaaggaaatgaggagcaactgaaaacaagcgggtaccgcagagttcctggtgat
agatgtgaaggtggatttagtccattgcgctctgagcagaaactttcaagtaaatgtgaa
aaggcacagaagtcaaaagatatgacagttgtgactgttgtaagtgctgtgattttggta
ttagcgttagttggaggaattaccctaataatgaaaaaatatgtatgtggtggaaggtcg
ttaatatatcgctattctgcacttcaacaacgagatgatgagacttgcattattgctgat
gccaataatactgatagaacctttcatgatgactcagatgaggatttgattgaataa
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