Polypterus senegalus (gray bichir): 120534046
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Entry
120534046 CDS
T08668
Symbol
optn
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04137
Mitophagy - animal
psex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120534046 (optn)
04137 Mitophagy - animal
120534046 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120534046 (optn)
Membrane trafficking [BR:
psex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120534046 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120534046 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
120534046 (optn)
Xenophagy
Cargo receptors
120534046 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
zf_C2H2_10
NEMO
EDR4-like_1st
Scaffolding_pro
Motif
Other DBs
NCBI-GeneID:
120534046
NCBI-ProteinID:
XP_039617216
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Position
8:complement(72989087..73044243)
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AA seq
570 aa
AA seq
DB search
MASNSVLGNGEMANGCATPQNGLIGHSTPANHLGTLDETLHHMNMLIKENSDLKESLKHT
NMSMKERFENLALWKEKQKEDREFLEKNVQEARERVSSLTKLNEELRKKLQAFEDAGTDK
ILFQDLHLEIEQLKTMINRLKAEKSDLVAMNSELQLKLGNQSPENSFVEIRIAEGEKNPV
NNAPNDSLLFSRNKYSEDTNTTLDSEELTVCQLLQSLRSESQKVEKLHLQLQAADEKLRA
AEERVTEIEIKKGAAVEDETQTEVLITEIATQTIETCRGADKKDEMTSYEVDNLKSQVKS
LFEELQQTQSNMDEAEKMKKTLQEKCLSLEQNLSTLQVQLGDKQQILHENEKLKLQLDSL
QSVNKMGQAKTEEDKRKLAQLQEAYKKLFEDYNESKKMVEGMKARQEEGNELFARLHNAE
EALAAKQLKIDEMQQHIFKQEQELETVSVFKAQAEVYSSDFYAERAAREKIHEEKERLAF
QVEFLKKQNAKFQEDLEQFGRLSLNDMKERHVPRGASPPNNVQQMNARGARAPDNRDWQQ
VTIPEHACPKCNEVLPDIDSLQIHVMDCII
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaactcagtgttggggaatggtgaaatggccaatggttgtgccaccccacaa
aatggattgattggtcactctactcctgccaaccatttgggcacacttgatgaaactttg
caccatatgaatatgcttattaaagagaacagtgatctcaaagagtctctaaagcacacc
aatatgtccatgaaagaaagatttgaaaatcttgctctgtggaaggagaagcaaaaggag
gacagagaatttctggagaaaaatgtgcaagaagccagggaaagagtgagcagtctgacc
aaacttaatgaagagctaagaaagaaactgcaggcttttgaagatgctggaactgataag
attctgtttcaagatcttcatctggaaattgagcaactcaaaactatgatcaaccgcttg
aaagctgaaaagtcagatctggtcgccatgaattctgaactacagctgaaactgggaaac
caatcaccagaaaattcatttgttgagataagaattgcagaaggagagaagaatcctgtt
aacaatgcaccaaatgactctcttctttttagcaggaataaatacagtgaggataccaat
actactttggattcagaagaattaactgtttgccagctgcttcagtccttgagaagtgaa
agtcagaaagttgaaaaacttcatcttcagcttcaagctgctgatgagaagctaagagct
gctgaagagagagtgacagagatagaaattaaaaaaggggctgctgttgaagatgaaact
cagactgaagtgttaataactgaaatagccacacaaacaatagaaacatgtagaggagct
gataagaaggatgaaatgacttcttatgaagttgataatttgaagtcccaagtaaaatct
ttatttgaagaattgcaacagacacagagtaacatggatgaggctgaaaaaatgaagaag
actttgcaagagaaatgtctcagtttggagcagaatctttctacgttacaagtacaattg
ggtgataaacagcaaatcttgcatgagaatgaaaagttgaagctgcaattggatagccta
caatctgtaaataaaatggggcaggcaaaaaccgaggaagacaagagaaagcttgcccag
ttacaagaagcatacaagaagctttttgaagattataatgaaagtaagaaaatggtggag
ggaatgaaagcaagacaggaagaaggaaatgaactttttgccagacttcataatgcagag
gaagccctagctgcaaagcagctaaaaattgatgaaatgcagcagcatatttttaagcaa
gaacaagaattggaaactgtgtcagtctttaaggcccaggctgaagtttattcttctgat
ttctatgctgaaagggcagcaagagaaaagattcatgaagaaaaggaacggcttgcattc
caggtggagtttttaaaaaagcagaatgccaaattccaggaggaccttgaacagtttgga
aggttatcactaaatgatatgaaagaaagacatgttcccaggggagccagtcctccaaac
aatgttcaacaaatgaatgcacggggagcaagagctcctgataatcgagattggcagcaa
gttactattcctgaacacgcctgcccaaaatgcaatgaagttcttccagatattgacagt
ctccaaatacatgtcatggactgcattatatag
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