KEGG   Polypterus senegalus (gray bichir): 120534046
Entry
120534046         CDS       T08668                                 
Symbol
optn
Name
(RefSeq) optineurin isoform X1
  KO
K19946  optineurin
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04137  Mitophagy - animal
psex04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:psex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120534046 (optn)
   04137 Mitophagy - animal
    120534046 (optn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psex04131]
    120534046 (optn)
Membrane trafficking [BR:psex04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    120534046 (optn)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    120534046 (optn)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    120534046 (optn)
  Xenophagy
   Cargo receptors
    120534046 (optn)
SSDB
Motif
Pfam: CC2-LZ zf_C2H2_10 NEMO EDR4-like_1st Scaffolding_pro
Other DBs
NCBI-GeneID: 120534046
NCBI-ProteinID: XP_039617216
LinkDB
Position
8:complement(72989087..73044243)
AA seq 570 aa
MASNSVLGNGEMANGCATPQNGLIGHSTPANHLGTLDETLHHMNMLIKENSDLKESLKHT
NMSMKERFENLALWKEKQKEDREFLEKNVQEARERVSSLTKLNEELRKKLQAFEDAGTDK
ILFQDLHLEIEQLKTMINRLKAEKSDLVAMNSELQLKLGNQSPENSFVEIRIAEGEKNPV
NNAPNDSLLFSRNKYSEDTNTTLDSEELTVCQLLQSLRSESQKVEKLHLQLQAADEKLRA
AEERVTEIEIKKGAAVEDETQTEVLITEIATQTIETCRGADKKDEMTSYEVDNLKSQVKS
LFEELQQTQSNMDEAEKMKKTLQEKCLSLEQNLSTLQVQLGDKQQILHENEKLKLQLDSL
QSVNKMGQAKTEEDKRKLAQLQEAYKKLFEDYNESKKMVEGMKARQEEGNELFARLHNAE
EALAAKQLKIDEMQQHIFKQEQELETVSVFKAQAEVYSSDFYAERAAREKIHEEKERLAF
QVEFLKKQNAKFQEDLEQFGRLSLNDMKERHVPRGASPPNNVQQMNARGARAPDNRDWQQ
VTIPEHACPKCNEVLPDIDSLQIHVMDCII
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggcttctaactcagtgttggggaatggtgaaatggccaatggttgtgccaccccacaa
aatggattgattggtcactctactcctgccaaccatttgggcacacttgatgaaactttg
caccatatgaatatgcttattaaagagaacagtgatctcaaagagtctctaaagcacacc
aatatgtccatgaaagaaagatttgaaaatcttgctctgtggaaggagaagcaaaaggag
gacagagaatttctggagaaaaatgtgcaagaagccagggaaagagtgagcagtctgacc
aaacttaatgaagagctaagaaagaaactgcaggcttttgaagatgctggaactgataag
attctgtttcaagatcttcatctggaaattgagcaactcaaaactatgatcaaccgcttg
aaagctgaaaagtcagatctggtcgccatgaattctgaactacagctgaaactgggaaac
caatcaccagaaaattcatttgttgagataagaattgcagaaggagagaagaatcctgtt
aacaatgcaccaaatgactctcttctttttagcaggaataaatacagtgaggataccaat
actactttggattcagaagaattaactgtttgccagctgcttcagtccttgagaagtgaa
agtcagaaagttgaaaaacttcatcttcagcttcaagctgctgatgagaagctaagagct
gctgaagagagagtgacagagatagaaattaaaaaaggggctgctgttgaagatgaaact
cagactgaagtgttaataactgaaatagccacacaaacaatagaaacatgtagaggagct
gataagaaggatgaaatgacttcttatgaagttgataatttgaagtcccaagtaaaatct
ttatttgaagaattgcaacagacacagagtaacatggatgaggctgaaaaaatgaagaag
actttgcaagagaaatgtctcagtttggagcagaatctttctacgttacaagtacaattg
ggtgataaacagcaaatcttgcatgagaatgaaaagttgaagctgcaattggatagccta
caatctgtaaataaaatggggcaggcaaaaaccgaggaagacaagagaaagcttgcccag
ttacaagaagcatacaagaagctttttgaagattataatgaaagtaagaaaatggtggag
ggaatgaaagcaagacaggaagaaggaaatgaactttttgccagacttcataatgcagag
gaagccctagctgcaaagcagctaaaaattgatgaaatgcagcagcatatttttaagcaa
gaacaagaattggaaactgtgtcagtctttaaggcccaggctgaagtttattcttctgat
ttctatgctgaaagggcagcaagagaaaagattcatgaagaaaaggaacggcttgcattc
caggtggagtttttaaaaaagcagaatgccaaattccaggaggaccttgaacagtttgga
aggttatcactaaatgatatgaaagaaagacatgttcccaggggagccagtcctccaaac
aatgttcaacaaatgaatgcacggggagcaagagctcctgataatcgagattggcagcaa
gttactattcctgaacacgcctgcccaaaatgcaatgaagttcttccagatattgacagt
ctccaaatacatgtcatggactgcattatatag

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