Polypterus senegalus (gray bichir): 120534160
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Entry
120534160 CDS
T08668
Symbol
cpt1b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, muscle isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00071
Fatty acid degradation
psex01212
Fatty acid metabolism
psex03320
PPAR signaling pathway
psex04148
Efferocytosis
psex04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
120534160 (cpt1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120534160 (cpt1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120534160 (cpt1b)
03320 PPAR signaling pathway
120534160 (cpt1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
psex03029
]
120534160 (cpt1b)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
120534160 (cpt1b)
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120534160 (cpt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
PANTS-like
Motif
Other DBs
NCBI-GeneID:
120534160
NCBI-ProteinID:
XP_039617441
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Position
8:complement(101123903..101178236)
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AA seq
771 aa
AA seq
DB search
MAEAHQAVAFQFTVTPDGIDFRLSQEVLKHIYLSGVTSWRKRFIRFKNGILTGVYPASPS
SWLFVVIAIMSAMYARIDPSMGMIDGIKKNLPVNGYMAIQTQTMLSAILFSTGLWISLIF
ILRQMLKLLLSYHGWMFEPHGQISRSTRIWAVLVKIFSVRKPMLYSFQASLPRLPVPRID
DTIKRYLESVRPLLDDEQYSKMETLAEEFKKNPAPRLQKYLLLKSWWAPNYVSDWWEEYI
YLRSRNPIMVNSNYYVMDLVSMTPTHLQAARAGNAVYAMLLYRRKLDREELSPMKVFGIV
PMCSNQMERMFNTTRIPGIETDSVQHLKDSKHMVVYHKGRFYKVSLYQGGRLLLPSEFEM
QFQKILDDTTEPHVGELKLPALTAGERIPWARARAQFFSQGVNKASLDAIEKAAIFMTLD
DEAHGYDRQKPRSMNLYAKSLLHGKCYDRWFDKSFNLIVYTNGKLGINAEHSWSDAPTVG
HLWEFVLAEDIFQLGYTEDGHCKGEVNKSIPPPFKLQWDITQECKDVIESSCNVAKALAE
DVDFYGYLFEDFGKGSIKMCRTSPDAFIQLALQLAHFRDKGQFCLTYEASMTRIFREGRT
ETIRSCTLQSTKFVYAMEDASKSNEEKLELFRKAAEKHQHMCRLAMTGAGIDRHLFCLYV
VSKYLGMDPPFLKQVLSEPWRLSTSQTPQQQLCMIDLEKHPDCISAGGGFGPVADDGYGV
SYIISGENRMTFHISSKLSSPETDSYRFGQNIRQALLDIRALFSQKKNMKL
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagctcaccaggcagtagcgtttcagttcacggtgactccagatggaattgac
tttcgacttagtcaggaggtcctgaagcatatctacctgtcaggtgtaacttcatggagg
aaacgcttcatcaggtttaagaatggaattctgacaggagtatatcctgcaagcccctca
agctggctttttgtagtcattgctattatgagtgccatgtatgcaagaatagacccttca
atgggcatgattgatggcatcaagaagaacttgccagtgaatggctacatggctattcag
acacagacgatgctaagtgccatattgttttcaaccggcttgtggatttctctcattttt
attctgcgtcaaatgttgaagctcctcctttcatatcatgggtggatgtttgaacctcac
ggtcaaataagcagatcaaccagaatatgggcagtcttagtgaagattttttctgtccgg
aagcctatgctttacagtttccaggcttcacttcctcgccttccagtgcccagaatcgat
gacacgataaaacggtacctggagtcagttcgccctctactggatgatgagcaatacagc
aaaatggaaactttggctgaagaatttaaaaagaatccagcaccacgattacaaaagtat
ctacttctgaaatcttggtgggcaccaaattatgtcagtgattggtgggaagaatacatt
tacctgagaagccggaaccccatcatggtcaacagcaattattatgtcatggaccttgtg
tcgatgaccccaactcaccttcaggcagcaagggctggaaatgcagtctatgccatgctg
ctttatcgcaggaaattggacagagaggaactcagcccaatgaaggtatttgggattgtt
cccatgtgctccaaccagatggaacggatgtttaacactaccaggattccaggaattgaa
actgattctgttcagcatttgaaagacagcaaacatatggtcgtctaccataaagggcga
ttttataaagtctcactgtaccagggtgggcgactacttctaccttctgagtttgagatg
cagttccaaaagatcttggatgacacaacagagccacatgtgggagaattaaaactgcca
gcactgacagctggggaaagaattccttgggccagagctcgggcccaattcttcagccaa
ggtgtcaataaagcttccctcgatgcaattgaaaaagctgcaatattcatgactctagat
gatgaggctcacggatatgaccggcagaaaccgaggtcaatgaacctatatgctaaatcg
ttattacatgggaaatgctatgacaggtggtttgataagtcatttaaccttattgtctat
acaaatggaaagttggggatcaacgcagagcattcgtggtcagatgcaccgacagttgga
catctatgggagtttgttctggcagaagacattttccagctaggctatactgaggatggg
cactgtaaaggagaagtgaacaagagtatcccaccacctttcaaactgcaatgggatatt
acacaagagtgcaaagatgttattgaaagttcctgtaatgtggctaaagcattagctgaa
gatgtcgacttttatggatatctgtttgaagactttggaaaaggatccataaaaatgtgc
agaacgagtccagatgctttcattcaacttgctctacagcttgctcactttagggacaag
gggcagttttgccttacatatgaagcctcgatgactcggatattccgggaaggccgaacc
gaaactattcgctcctgcacacttcaatcaacaaaatttgtttatgccatggaagatgca
agcaaaagtaatgaagagaagcttgaacttttccgcaaagcagcagagaaacatcaacat
atgtgccgtttggcaatgacaggtgcgggcattgaccgccaccttttctgtctgtatgtc
gtctctaaatatctgggaatggaccctccattcctcaaacaggtgttgtcagagccctgg
aggttgtccaccagtcagacaccccagcaacagctctgcatgattgatttggaaaagcat
cctgactgcatcagtgctggtgggggatttgggccagtagcagatgatggatatggggta
tcatacataatctcaggagaaaatcggatgaccttccacatttccagcaaactttccagt
ccagaaacagattcctatcgatttgggcagaacattcgccaagcattgctggacatcagg
gctttgttcagccagaaaaagaacatgaaactataa
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