Polypterus senegalus (gray bichir): 120534209
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Entry
120534209 CDS
T08668
Symbol
stag1a
Name
(RefSeq) cohesin subunit SA-1a
KO
K06671
cohesin complex subunit SA-1/2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120534209 (stag1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120534209 (stag1a)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120534209 (stag1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
120534209
NCBI-ProteinID:
XP_039617547
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All DBs
Position
1:complement(161768869..162041384)
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AA seq
1261 aa
AA seq
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MITSELPVLQDSTNESGQVETVSLSVTMSEMEDTGEVKGKRKRGRPGRPPSANKKPRKSP
AEKSQFSGPRGSRKANGVPQQNGEGEPITLFEVVKMGKSAMQSVVDDWIESYKQDRDIAL
LDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSN
FCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSIHQDNTQRQYEAERNKIAGKRANEKLELLLEKRKELQENQDEIENMMNSIFKGIFV
HRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNL
YTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVY
HLVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESEL
HEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEVLSDRQESALIELMVCTIRQAA
EAHPPVGRGTGKRVLTAKERKMQIDDKNKITEHFIMALPMLLSKYQADSEKVANLLQIPQ
FFDLEIYSAGRMEKHLDALLKQIKFVVEKHTETEVLEACSKTYSILCSEEYTIMNRVDVA
RSQLIDEMVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGNCY
RLLKSGIEQGSMPEQIAVQALQCSHYSILWHLVKITESSPSKEDLLALRKVVKSFLAVCQ
QCLSNVNTPVKEQAFMLLCDLLMIFSHQLTTGSREGLQPLIFNPDSQLQNELLSFVLDHV
FIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMKYY
NDYGDIIKETLSKTRQTDKIQCAKTLILSLQQLFNELIQEQGPNLDRTSSHVSGIKELAR
RFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPKGPEYPPLNLAFLEVLSEFSSKLLRQ
DKKTVHSYLEKFMTEQMMERREDVWLPLISYRNSLLTGGDEDRLSVTSGSGSNKTSSVRS
KKGRPPLHKKRIEEESVEGSWLMRNDSIQTPGALQTPQLTSTVLRENPRQAAEHMPPDQG
SEPNSEADYVHNQQMQMSWLGQQKLDEVSRKDRANMNYLKARAGVRQTVRGLMEDDAEPI
FEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMPM
F
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgataacgtcagaattaccagtgttgcaggactcaacaaatgagtctggccaggtggaa
actgtaagtttgagtgtcaccatgagtgaaatggaggatactggtgaagttaaaggcaag
agaaaaagaggacgacccggtagaccaccgtctgccaacaagaagcctcgaaaatcccct
gcagaaaaaagccagttttcaggacctagggggagtaggaaggctaatggtgttccccag
caaaatggagaaggagagcccatcacactgtttgaagttgtgaagatgggcaaaagtgcc
atgcagagtgttgttgatgactggattgagtcctacaagcaagatagagacatagcactt
cttgatctgatcaacttctttattcagtgttctgggtgtaaaggaactgtacgaattgag
atgttcaggaacatgcaaaatgcagaaatcatcagaaaaatgacagaagaatttgatgag
gacagtggtgattatccactcaccatgccaggtcctcagtggaagaaatttcgttccaat
ttctgtgaatttattggagttttaattcggcagtgtcaatacagcataatttatgatgaa
tatatgatggacactgttatatctttactgactggactttcagattcccaagttcgagct
ttcagacataccagtacacttgcagctatgaagcttatgacagcacttgtcaatgttgcc
ttgaacttgagcatccaccaagacaatacacagaggcagtatgaggcagagagaaacaaa
atagctggaaagcgggcaaatgagaaattagagctccttttggagaaaagaaaagagctt
caggaaaatcaggatgaaattgaaaacatgatgaactcaatcttcaagggtatttttgtt
cacagatatagagatgcaattgctgagataagagcaatttgcatagaggaaattggtgtt
tggatgaaaatgtacagtgatgctttccttaatgacagctatctgaaatatgttggttgg
acattgcatgatcgtcaaggtgaagtccggctgaagtgcttgaaagctctgcaaaacttg
tacacaaacagagaactctttccaaagttggagctgtttactaacagatttaaggataga
attgtttccatgactcttgataaagagtatgatgtggctgtagaagctatacgattggta
acattaattttacaaggcagtgaagatgctctgtcaaatgaagattgtgaaaatgtttac
catttggtttactcagctcatagacctgttgcagtagcagctggagaatttttgcataga
aagctgtttagtaggcatgacccgcaagcagaggaggccttagccaaaagaagagggaga
aatagccccaatggcaatcttattcgaatgcttgttctcttcttcttggaaagtgagctt
catgagcatgcagcctatctagttgacagtttatgggaaagctcacaggagctgttgaaa
gattgggaatgtatgactgagctgcttctggaagagcctgtgcaaggagaagaagtatta
tcagatcgacaagagagcgctcttatagagctaatggtgtgtacaatccggcaagctgct
gaagctcatccaccagttggtagaggaacaggaaaacgtgttctgactgctaaagaaaga
aaaatgcaaatcgatgacaaaaataagataactgaacacttcatcatggcacttccaatg
cttctctctaagtatcaagcagattctgagaaggtggcaaacctgttacaaattccacag
ttttttgacttagaaatatatagtgcagggagaatggaaaagcaccttgatgccttgtta
aaacaaattaaatttgtggtggaaaagcacactgaaacagaggtacttgaagcttgtagc
aaaacctacagtattctgtgcagcgaagagtacaccatcatgaacagagtggatgtggcc
cgcagtcagcttattgatgaaatggtggatcgattcaatcactctgtagaagatttgctg
caagagggtgaagaagctgatgatgatgacatttataatgttctctccactttgaaacgg
ctaacagcttttcataacgcacatgatctaaccagatgggatttatttggcaactgttac
aggcttttgaagagtggtattgaacaaggatcaatgcctgagcagattgcagtgcaggct
ctgcagtgttctcattattctattctttggcatttagtcaaaattacagaaagttctccg
tctaaggaagatttacttgcactaagaaaggttgtgaagtcatttcttgctgtttgtcag
caatgtctatcaaatgtgaacactccagttaaagaacaggcatttatgctgctatgtgat
cttttaatgatcttcagccaccaattaacaacaggaagccgagaaggactccaaccacta
atctttaatccagatagtcaacttcagaatgaacttcttagttttgttttggatcatgtt
ttcatagatcaggatgaggaaaaccaaagcatggaaggggatgaagaagatgaggctaat
aaaattgaagccttacataagcgaagaaacctccttgcagccttcagcaaacttattatt
tatgacattgttgatatgcatgcagctgctgatatcttcaaacactatatgaagtactat
aatgactatggtgatatcattaaggaaacactaagcaaaaccaggcaaactgataaaata
cagtgtgcaaaaactcttattctcagtttacaacagctttttaatgagcttattcaggag
caaggtcccaatttggacaggacctcatctcatgtcagtggaattaaagagttggctcgc
agatttgctcttacctttggtttggatcaaatcaaaaccagagaagctgttgcaacattg
cacaaggacggtattgaatttgcatttaaatatcaaaatccaaaaggaccagaatatcct
cctctaaaccttgcattcctggaagttctcagtgagttctcctctaaactacttcgccaa
gacaaaaagacagttcactcatacctggagaagttcatgacggaacaaatgatggagcga
cgagaagacgtgtggctacccctcatctcttatcgaaactccttgcttactggtggagat
gaagacagattatctgttaccagtggaagtggcagcaacaaaacatcatcagtacgaagt
aaaaaagggagacctccacttcataaaaaacgaatagaagaagaaagtgttgaaggatcg
tggctcatgagaaatgatagtatacagacgccaggtgctttacaaacaccacagcttaca
tccacggtactacgagaaaatccaagacaagcggctgagcacatgcccccagatcaaggc
tctgaacccaactctgaagcagattatgtacacaatcaacaaatgcaaatgtcctggtta
ggacagcaaaagctggatgaagtaagtcggaaagacagagcaaatatgaattatcttaaa
gccagagctggtgtaaggcagactgttcgaggactaatggaagatgatgcagaaccaatc
tttgaagatgtaatgatgtcttcgcgtggacagttagaagacatgaatgaagaatttgag
gataccatggtcattgatcttccgccctccaggaacagacgtgaacgagcagaattaaga
cctgatttctttgattctgcagctattatagaagatgattcgggttttgggatgcctatg
ttctga
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