KEGG   Polypterus senegalus (gray bichir): 120534211
Entry
120534211         CDS       T08668                                 
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
  KO
K14791  periodic tryptophan protein 1
Organism
psex  Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:psex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psex03009]
    120534211 (pwp1)
Ribosome biogenesis [BR:psex03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    120534211 (pwp1)
  Pre-60S particles
   Other pre-60S particles
    120534211 (pwp1)
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 EIF3I WD40_WDHD1_1st Beta-prop_RIG_2nd WD40_RFWD3 WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_DCAF12 WDR54
Other DBs
NCBI-GeneID: 120534211
NCBI-ProteinID: XP_039617553
LinkDB
Position
8:complement(111471483..111537470)
AA seq 492 aa
MSCQITCVNWVRRGIAKANPDKVELKKEELQTLIAEARRQLEEEVDNDDDDDDSGQVVEN
AEEGGEIAGEDCEDDSNAHSKTDVDELAEYDLDNYDNDTDTNNLGDTLAGLTVYGNNEED
PYITLKDTDIYEREDFEIKSNDNLILAGRAEKDCCNLEIHVYNNEEDSFYVHHDILLPAY
PLCVEWLNFDPNLDEGPGNYVAVGNMTPVIDVWDLDVVDCLEPVFSLGNAKKAKKKKSKK
KNQAAESTVGHSDAVLDLSWNKHIRNVLASASADNTVILWDMAQGKMASTLTVHTDNVQT
LKFHPFEAQTLISGSFDKSAILYDCRNPQDNHRIWRFSGQVERVTWNHFSPYNFLASTDD
GFVYCLDARSDKPIFTIKAHDGEVSGLDLSSQVNGCLVTSSSDKYVKIWDILGNKPNLIY
SRDMKMGVLFCASCCPDFPFVYAFGGQKGGLRVWNISDVGAVNAAFGNREKLVAAGPSSS
TEGSAAETKMET
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgagctgtcagattacttgtgtgaattgggtgaggagaggcatcgcaaaagcgaatcct
gacaaggtggaactgaagaaggaagagctgcagactctcattgcagaagcaaggagacaa
ctagaagaagaagtagataatgatgatgatgatgatgacagtggacaagttgtggaaaat
gcagaggaaggtggtgaaattgcaggcgaagattgtgaagatgattccaatgctcattcg
aaaacagatgtagatgaacttgcagaatacgacttagataattatgataatgatacagat
acaaataacctgggggacaccttggcagggctgactgtttatggcaataatgaagaggat
ccttacattactcttaaggatactgatatttatgaaagagaagactttgaaataaaatcg
aatgataatttgattttggctggaagagctgagaaggactgctgtaatttggagattcat
gtttataataatgaagaagactctttttatgtacaccatgatatcctcctgcctgcctac
ccattgtgtgttgaatggttgaattttgatccaaatctggatgagggaccaggtaattat
gttgctgttggtaatatgactcctgtgatagatgtatgggaccttgatgttgtggattgc
ctggaaccagtgttttctcttgggaatgctaaaaaagcaaagaagaaaaagtccaaaaaa
aagaatcaggcagcagaatctacagtgggacattcagatgctgtgttggatttgtcctgg
aacaaacacattaggaatgttttggcaagcgcatctgcagataatactgtaattttgtgg
gatatggctcaaggcaagatggcatcaactctcacagtgcatacagacaatgttcaaaca
ctgaagtttcatccatttgaagcacaaactcttatatctggatcttttgacaagtcagcc
attctgtatgactgcagaaatcctcaagacaaccacagaatttggagatttagtggtcaa
gttgaaagagtcacctggaatcacttttcaccatacaattttctggctagtacagatgat
ggttttgtgtactgtctggatgccagatcagataagcccatctttactatcaaagctcat
gatggtgaagtatcaggtttggatttaagcagtcaagttaatggatgcttagtgacatca
tcatcagataaatatgttaaaatatgggatatccttgggaacaagcctaatctaatttat
tcaagagacatgaaaatgggagttttgttctgtgcctcatgctgtccagactttccattt
gtctatgcatttggaggacagaaaggaggtttgcgtgtttggaacataagcgatgtagga
gcagtgaatgctgcttttgggaaccgagaaaaactagtggcagcaggaccttcaagctca
acagaaggcagtgctgcagaaacaaaaatggaaacctag

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