Polypterus senegalus (gray bichir): 120534211
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Entry
120534211 CDS
T08668
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120534211 (pwp1)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
90S particles
Other 90S particles
120534211 (pwp1)
Pre-60S particles
Other pre-60S particles
120534211 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
WD_LRWD1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_ACSF4
Beta-prop_DCAF12
WDR54
Motif
Other DBs
NCBI-GeneID:
120534211
NCBI-ProteinID:
XP_039617553
LinkDB
All DBs
Position
8:complement(111471483..111537470)
Genome browser
AA seq
492 aa
AA seq
DB search
MSCQITCVNWVRRGIAKANPDKVELKKEELQTLIAEARRQLEEEVDNDDDDDDSGQVVEN
AEEGGEIAGEDCEDDSNAHSKTDVDELAEYDLDNYDNDTDTNNLGDTLAGLTVYGNNEED
PYITLKDTDIYEREDFEIKSNDNLILAGRAEKDCCNLEIHVYNNEEDSFYVHHDILLPAY
PLCVEWLNFDPNLDEGPGNYVAVGNMTPVIDVWDLDVVDCLEPVFSLGNAKKAKKKKSKK
KNQAAESTVGHSDAVLDLSWNKHIRNVLASASADNTVILWDMAQGKMASTLTVHTDNVQT
LKFHPFEAQTLISGSFDKSAILYDCRNPQDNHRIWRFSGQVERVTWNHFSPYNFLASTDD
GFVYCLDARSDKPIFTIKAHDGEVSGLDLSSQVNGCLVTSSSDKYVKIWDILGNKPNLIY
SRDMKMGVLFCASCCPDFPFVYAFGGQKGGLRVWNISDVGAVNAAFGNREKLVAAGPSSS
TEGSAAETKMET
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtcagattacttgtgtgaattgggtgaggagaggcatcgcaaaagcgaatcct
gacaaggtggaactgaagaaggaagagctgcagactctcattgcagaagcaaggagacaa
ctagaagaagaagtagataatgatgatgatgatgatgacagtggacaagttgtggaaaat
gcagaggaaggtggtgaaattgcaggcgaagattgtgaagatgattccaatgctcattcg
aaaacagatgtagatgaacttgcagaatacgacttagataattatgataatgatacagat
acaaataacctgggggacaccttggcagggctgactgtttatggcaataatgaagaggat
ccttacattactcttaaggatactgatatttatgaaagagaagactttgaaataaaatcg
aatgataatttgattttggctggaagagctgagaaggactgctgtaatttggagattcat
gtttataataatgaagaagactctttttatgtacaccatgatatcctcctgcctgcctac
ccattgtgtgttgaatggttgaattttgatccaaatctggatgagggaccaggtaattat
gttgctgttggtaatatgactcctgtgatagatgtatgggaccttgatgttgtggattgc
ctggaaccagtgttttctcttgggaatgctaaaaaagcaaagaagaaaaagtccaaaaaa
aagaatcaggcagcagaatctacagtgggacattcagatgctgtgttggatttgtcctgg
aacaaacacattaggaatgttttggcaagcgcatctgcagataatactgtaattttgtgg
gatatggctcaaggcaagatggcatcaactctcacagtgcatacagacaatgttcaaaca
ctgaagtttcatccatttgaagcacaaactcttatatctggatcttttgacaagtcagcc
attctgtatgactgcagaaatcctcaagacaaccacagaatttggagatttagtggtcaa
gttgaaagagtcacctggaatcacttttcaccatacaattttctggctagtacagatgat
ggttttgtgtactgtctggatgccagatcagataagcccatctttactatcaaagctcat
gatggtgaagtatcaggtttggatttaagcagtcaagttaatggatgcttagtgacatca
tcatcagataaatatgttaaaatatgggatatccttgggaacaagcctaatctaatttat
tcaagagacatgaaaatgggagttttgttctgtgcctcatgctgtccagactttccattt
gtctatgcatttggaggacagaaaggaggtttgcgtgtttggaacataagcgatgtagga
gcagtgaatgctgcttttgggaaccgagaaaaactagtggcagcaggaccttcaagctca
acagaaggcagtgctgcagaaacaaaaatggaaacctag
DBGET
integrated database retrieval system
