Polypterus senegalus (gray bichir): 120534233
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Entry
120534233 CDS
T08668
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120534233 (ppfibp1b)
Membrane trafficking [BR:
psex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120534233 (ppfibp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF4845
FxsA
Motif
Other DBs
NCBI-GeneID:
120534233
NCBI-ProteinID:
XP_039617578
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Position
8:complement(114389798..114586842)
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AA seq
1110 aa
AA seq
DB search
MNTWGTLYGSTLSFKLSCEGLIQQRNLEKIVKFKMMSDASDMLAAALEQMDGIIAGSKAL
EYSNGIFDCQSPTSPFMGSLRVLHLVEDLRGLLELMDNEEKESLRCQIPDSTSESLVEWL
QGHMTNGHISLGNDVYQERLNRLESDKESLVLQVSVLTDQVEAQGEKIRDLDFCLEEHKE
KLNATEEMLQQELLSRTALETQKLDLMAEVSNLKLKLTAMEKDRLDLDERFKDNESLHNL
ISDLRDQMETLEVELALFQEKRLHYGDQECLIQEINELTYRITEMENERLQYEKKLKSTK
SLMAKVSSLKIKVGQMQYEKQRMEHKNQALKAELEMLKEQLEQKEVEVKRLQEESGLKNN
GSDGGEKNEKDENVKKKLKEKYFEVQKMKRAVESLMAANEEKDRKIEDLRQSLNRYKKVQ
DMVMSAQVKKEKLKSDSEESQSDSSTSVSTAISVAVESEKSPSPVRTNEEMYLTTEEVPL
QIHRSVLQVSIPALSSTPKASIEDELNQSTNKKQEFSEITSPDIISIIQETRLCDSPVSQ
NILKSSSLDNLKSNDNEKTSTQGRQKPLEMAENLLVFIKNKAYEEITKLGGLPPKSPNQT
GSVEDDSFGSRKARASFGRGFFKIKGNKRTASAPNLDRSRSASAPTLAETDKDVSDRLDL
AGLPQRSAETDSSNFSPSSPESKKKTSGIMRFFGKLKRSQSTTFNPDEMSETEFKRGGVR
ATAGPRLGWSRDLQNANNELDMPFARWSKDQVCNWLQEQGLGMHVNFSKQWIVSGQTLLQ
ASQQDLERELGLKHPLHRKKLQLALQALGSEEDDNKGKLDYHWVTRWLDDIGLSQYKTQF
DEARIDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQVLRLNNYEPNCLRRRPSDENNIT
PAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETLALLLNIPPTKT
LLRRHLATHFNLLIGSEAQKQKQECMESPDYTLLTATAKVKPRKLAFGTFGSLRKKKQDD
GEEYVCPMDLASPVQSSFHKGYKRGMELRLYDDDLDRLEQMEDSEGTVRQIGAFSEGINN
LTSMLKEDEFFKELSTCSPSSSVMDEDSNV
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatggggcaccctctatgggagtactttatcatttaaactgtcatgtgaagga
ctcatacagcaaagaaatcttgaaaaaattgttaaattcaagatgatgtctgatgcaagt
gatatgttggcagctgctttggagcagatggatggcatcattgcaggctccaaggcacta
gaatactccaatggtatctttgattgtcagtcacctacttctcccttcatgggcagtcta
cgagtgcttcaccttgtagaagatctgcgtggcttgctggagctgatggacaatgaagaa
aaagaaagcttgcgctgtcagatccctgattccacttctgaaagtttggttgaatggctg
caaggacacatgactaatggacacatttctcttggcaatgatgtgtatcaagaaaggtta
aatcggctggagagtgataaagaatcgcttgttttacaagttagtgttttaactgatcaa
gtggaagcacaaggagagaagattagggatctggatttttgcctggaggaacataaggag
aagctgaatgcaacagaagaaatgttacaacaggagcttttgagcagaactgccttggag
acacaaaagttggatcttatggctgaagtttctaatttaaaactaaaactaactgctatg
gagaaagacagactagacctggatgagaggttcaaagacaatgagtcactgcataactta
atttctgacctccgagaccagatggagacattggaggtggaactagcccttttccaagaa
aagaggttacattatggtgatcaagagtgcctgatccaggagataaatgagctgacttac
agaataacagaaatggaaaacgaaagactccaatatgaaaagaaattaaagtcaacaaag
tcacttatggccaaagtctctagtctgaaaatcaaggtgggtcagatgcagtacgaaaag
cagaggatggaacacaaaaaccaagcattgaaggctgagttggaaatgttgaaggagcaa
ctggaacagaaagaagtggaagtgaaaagattgcaagaggaatctggcttaaagaacaat
ggatctgatggtggagaaaaaaatgaaaaggatgaaaatgtaaaaaagaagctgaaagag
aaatactttgaggtacagaagatgaaaagggcagttgagtcattaatggcagcaaatgaa
gaaaaggaccgaaaaattgaagatcttaggcaatcactgaacaggtataagaaggtgcaa
gatatggtaatgtctgctcaagtaaaaaaagagaaacttaaaagtgatagtgaagaaagt
caaagtgatagttctacatcagtttctacagccatttcagttgccgtagagtcagagaaa
tctccctcaccagtaagaacaaatgaagaaatgtacttaacaactgaagaggtgcctctt
cagattcacagaagtgtcctgcaggtttcgatcccagctttatcatccacacccaaggct
tccattgaagatgaattgaatcagtctacaaataaaaagcaggagtttagtgaaataaca
tccccagatatcatttccataattcaagaaactcgtttgtgtgatagtcctgtctctcaa
aatatcctgaaatcaagcagtctggataatctgaagagcaatgataatgaaaagacatct
acacaaggccgtcagaagccgttggagatggctgaaaacttacttgtcttcattaagaat
aaagcttatgaagaaatcacaaaactgggtggacttcctccaaagtctccaaatcagact
ggatctgtagaagatgacagctttgggagccgaaaagcccgggcttcttttgggcgtgga
ttcttcaagatcaaagggaacaagcggacagcaagtgcccctaatctagatcgcagtcga
agtgccagtgcacctacattagcagagacagacaaagatgtcagtgatcgtctagatctg
gcaggacttcctcaaagatctgcagagactgatagctcaaacttttcaccttcatctccg
gagtcaaagaagaagaccagtggaatcatgaggttttttggaaaacttaaaaggagtcag
tctactacgtttaaccccgatgagatgtctgaaactgagtttaaaagaggaggtgttaga
gcaactgctggacctagactgggctggtctcgtgatctacagaatgctaacaatgaactg
gatatgccttttgcaagatggtctaaagatcaagtgtgtaactggctgcaggagcagggc
ttgggaatgcatgtaaatttttctaaacagtggatcgtttcgggacagactcttctacaa
gcttcacaacaagatcttgaacgggagcttggacttaaacatcctttacatcggaaaaaa
ttacagctggctttacaagcacttggctcagaggaggacgacaacaaaggaaagctcgat
taccactgggtgactcgatggcttgatgacattggactttctcagtacaaaactcagttt
gatgaagcaaggatagatgggagaatgctccattatatgactgttgatgatttgctctcc
ttaaaagttggaagtgtacttcatcacttgagcattaagagagcgattcaagttctacgc
cttaataactacgagcccaactgcttgcgaaggcgtccttcagatgagaacaatatcact
ccagcagaaatctcacagtggacaaatcaccgtgtaatggagtggttgcggtcagtggat
ttggctgaatatgccccaaatttaagaggaagtggagtacatggaggattaatggtgctg
gagcctcgattcaatgttgaaactttggctctgctcttaaacattccacctaccaaaact
ctgcttagacgtcacctggccactcatttcaatttgcttattggctctgaagcccaaaaa
cagaaacaggagtgcatggagtctcctgattacactctgctcacagctactgcaaaggtt
aagcccagaaagcttgcatttggaacatttgggagtctccggaaaaagaagcaagatgat
ggtgaagagtatgtttgcccaatggatttggcctcacctgtacaaagtagttttcataaa
ggatataagcgtggcatggagcttcgtttatatgatgacgacctagaccgtctggaacag
atggaagactctgaaggtacagtcagacaaattggagcattttctgaaggcattaataac
ttgacaagcatgctgaaagaagacgagtttttcaaagagctttctacgtgttctccaagt
tccagtgtaatggatgaagactcaaatgtgtga
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