Polypterus senegalus (gray bichir): 120534254
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Entry
120534254 CDS
T08668
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120534254 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120534254 (mybpc1)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120534254 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
THB
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_CYK3_C
Motif
Other DBs
NCBI-GeneID:
120534254
NCBI-ProteinID:
XP_039617625
LinkDB
All DBs
Position
8:118094045..118231252
Genome browser
AA seq
1239 aa
AA seq
DB search
MPEPTKKSEGKDERPNPIPEAQTENVPESSSSPEPAGELKDDAPFSTSDKEDDLAASTPS
PQPPSDDVSAGQKQTELPNDNLPESGTGRKDSVWSLGEAPPDDIDKHENTQRSTLLIEKP
QSRSVTVGGDTTFIAKVEAKDLLRKPTIKWFKGKWMDLASKTGKHLQLKESYDRVQKIHT
FEMHIIKAKENYAGNYRCEVTYKDKFDSCSFDLEVIEVPEVSQNIDIRSAFKRSGEGQED
AGELDFSGLLKHRMNREQKEEPVEEIDVWELLKNSPPQEYEKIAFTYGITDLRGMLKRLK
RIKREEKKSEAFAKKLDPAYQVDKGGRIRFVVELADPTLDLKWYKNGQEIRPTPNQKKYI
FEHKGTERILIINNCTLADDAAYQVTAGDDKCTTELFVKELPVTITKELEDVKTTVNERI
ELECEVSEEDANVKWFKNGVEIPREIRSKFRFKTEGLKHMLIIDDAMREDSGVYTVMTTG
GETKAHVKVDLKPLKILQDLTDQTVRLGKSVNLHCEINPGNVPGRWYKNGQLIQGGDRIK
IIHRGRNHRLEIENAGVDDEGDYTFVPEGYTVSLCSKIHVIDPPKIHLDSLNFTDNTVTV
VAGNKLRLEIPISGEPAPKVLWKKGDRPKFHYTHYLSMTPVIRQANLQNDSVIMDTGGRV
RAENFPDHSTFTIDAAEREDTGTYTILLQNEAGEDSAQIKIKVVDVPDPPPPPTVTEVGG
DWCSMIWEPPVYDGGSAISGYFIERKKKQSSRWMRLNFDLCKEMAFEPKKMIEGVPYEVR
VFAVNTIGTSRASEPSKAFIPLAVTSEPTMLVVDGVTDTTVTMKWRPPDTIGAAGLDGYV
VEYCFEGTEEWIVANEDLTEKTRYTITGLPTGEKIFVRVKAINAAGASEPRMHPHPILVK
EVIEKPKIRLPRHLKQTYIRRVGEVVNLLIPFQGRPRPKVSWSKNNLPVDPSQVSIRNSE
SDSIIFIRKAERKHSGKYQMIVQVENYQDKATIDIQIVDRPGPPQIVKIAEVWGENVALE
WTQPKDSGNAPITGYTIQKADKKTMEWFTIIEHYHRTNITITELVIGNEYYFRVYSENMC
GLSEDATVTKDCAIIVKEGSNYKNPDYEDFDFTEAPKFTHPLVNTFAVAGYNATLNCSVR
ANPRPKVMWMKNKIIITDDPRYRMFSNQGVCTLEIRKPNPYDGGTYSCKAINDLGEAEVE
CKLEVKGGFTFYELMQQGVPLHLINNYMNEMKNSEQDKK
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacccactaagaaatcagaagggaaagatgagagaccaaacccaatacctgaa
gctcaaactgaaaatgttccagagagctcttcttcgccagagccagcaggagagctaaag
gatgatgcaccttttagcacctctgataaagaggatgatcttgcggcaagtaccccatct
ccacagcctccatcagatgacgtcagtgctggtcaaaagcaaactgaacttcctaatgat
aatctccccgagtcgggcacaggaagaaaagactcagtatggtctcttggggaagcccct
cctgatgatatcgacaagcatgagaacacccagcgttcaactctgctgattgagaagccc
cagagtaggtcagtcactgtaggtggtgatactacttttatagcaaaggttgaagcaaaa
gaccttctaagaaaacccacaattaagtggtttaaaggaaaatggatggatcttgcaagc
aaaactggaaaacatctccaactgaaagaatcatatgatcgtgtacaaaagattcataca
tttgaaatgcacatcatcaaagcaaaggaaaattatgctgggaattaccgttgtgaagta
acatacaaggataaatttgatagctgttcttttgatttggaggttatagaggttccagaa
gtttcacaaaatattgacatccgttcagcttttaaacgaagtggtgaaggtcaagaagat
gctggagagctcgactttagtggtcttcttaaacacagaatgaacagggaacaaaaagaa
gaacctgtggaggaaattgatgtttgggagttgctcaagaactcccctcctcaagaatat
gaaaagattgcattcacttatgggatcactgatctgaggggcatgttgaaaagattaaag
cgcattaagcgggaagagaagaaaagtgaagcatttgccaagaaattagatcctgcatac
caagtagacaaaggtgggagaatcagatttgttgtagagctcgctgatccaactctggac
ctaaaatggtacaaaaatggccaggagatacgccccaccccaaatcaaaaaaagtacatc
tttgaacataagggtaccgagcgcatcctgattattaataactgtacgctggcagatgat
gcagcttatcaggtcacagcaggggatgacaagtgtaccactgaattgtttgtaaaagaa
ttaccagtaacaataactaaggaacttgaagatgtaaaaacaacagttaatgaaagaata
gagcttgaatgtgaagtgtctgaggaggacgctaacgttaagtggtttaaaaatggagtg
gaaattcccagggaaattcgctctaagttcagatttaagactgaaggtttaaaacacatg
ctaattattgatgatgcaatgagggaagactctggtgtgtacacagtgatgactacagga
ggagagacaaaagctcatgtaaaagtggacctaaaacccttaaaaatactacaagactta
actgaccaaacagtaagactagggaaatcagtaaatcttcattgtgaaataaatcctggt
aatgtacctggaaggtggtacaagaatggacagctgatccaaggaggagaccgtatcaag
atcattcacagaggaaggaaccacaggctagaaatagaaaatgcaggagtcgatgatgag
ggtgactatacttttgttccagaaggctatactgtaagcctgtgcagtaaaatccatgtt
atcgatcccccaaaaattcatcttgacagtcttaatttcactgacaatacagtaacagtg
gtagcaggaaacaagctgcgcctggagataccaatttctggagagcctgctcctaaggtt
ttgtggaagaaaggagataggccaaaattccactatacccactacctatctatgacacca
gtcatacgacaagcaaaccttcagaatgacagcgtaattatggatacaggtggccgagtt
cgtgctgagaatttccctgaccatagcacctttactatagatgcagcagaaagagaggat
actggaacgtatacaattttactgcagaatgaagctggtgaggattctgcacagatcaaa
ataaaagtagtagatgttcctgaccctcctcctccacctacagtaactgaagttggaggt
gactggtgttcaatgatttgggagccaccagtatatgatggaggctcagcaatttcaggc
tacttcattgaaagaaagaaaaagcaaagttcgaggtggatgagactgaattttgatctt
tgtaaagaaatggcctttgaacctaagaaaatgattgaaggtgttccctatgaagttcga
gtatttgctgtgaatacaataggtacttccagggccagtgaaccttcaaaagcatttatc
cctcttgctgtaaccagtgaacccacaatgctggtagtagatggagtaactgatacaaca
gttacaatgaaatggagaccaccagacacaataggagctgcaggacttgatggttatgta
gtagagtactgctttgaaggaactgaagaatggatagtcgccaatgaagacctgacagaa
aagacaaggtatacaattactggcttgcccacaggtgaaaagatctttgtcagggtaaaa
gcaatcaatgcagcaggtgccagtgaaccaagaatgcacccacatccaattcttgtgaaa
gaagtcattgaaaaacccaagattcgtcttcccaggcatcttaagcaaacttacattcga
agagttggagaagtggtaaacctacttataccttttcagggtagaccaaggcctaaagtg
agctggtcaaagaataatttaccagtagacccaagccaggttagcattcgtaacagtgaa
agtgacagcattatcttcatccggaaagctgagagaaaacattctggaaaataccagatg
attgttcaagtagagaattatcaagacaaagctacaatagacattcaaattgtggaccga
cctgggcctccccagattgtgaaaatcgcagaagtctggggtgaaaatgttgccctggag
tggactcagcctaaagatagtggcaatgcacctattacaggctacaccattcagaaggca
gataaaaagacaatggagtggtttaccataattgaacattatcaccgaaccaacattaca
ataacagagcttgtcattgggaatgagtactatttcagagtgtattcagaaaacatgtgt
ggcctcagtgaggatgctacagtaaccaaagattgtgccatcattgtgaaagaaggatct
aattataagaatccagactatgaagactttgatttcacagaagctccaaaatttactcat
ccccttgtgaatacttttgcagttgcaggatataatgcaactttgaattgcagcgtacgc
gcaaatccacggccaaaggtaatgtggatgaaaaataaaatcatcatcacagatgatcca
cgctacagaatgttcagtaaccagggcgtatgcacccttgagattcggaagcccaaccct
tatgatggtggcacctattcatgcaaagctattaatgatttgggtgaggcagaagtagag
tgtaagctggaagtgaaaggtgggtttacattctatgagcttatgcaacagggggtgcct
ttacacctcattaataactacatgaatgagatgaagaactctgaacaggacaagaaatga
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