Polypterus senegalus (gray bichir): 120534325
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Entry
120534325 CDS
T08668
Symbol
samm50l
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120534325 (samm50l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
psex03029
]
120534325 (samm50l)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psex02000
]
120534325 (samm50l)
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
120534325 (samm50l)
Transporters [BR:
psex02000
]
Other transporters
Pores ion channels [TC:
1
]
120534325 (samm50l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
120534325
NCBI-ProteinID:
XP_039617761
LinkDB
All DBs
Position
8:complement(139245971..139280230)
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AA seq
469 aa
AA seq
DB search
MGTVHARSLDPLPMTGPDFGVHGDDVEFVEVQPESKQEVLENKDVIVQRVHIDGLGRTKE
DFLGYEIAELFTAKNLIDVMKKAHEAREKLLRLGIFRQVEVVIDTCQEEDALPNGLDVTF
EVKEMRRLTGSYNTMVGNNEGSMVLGLKLPNLFGRAEKLTFQFSYGTKETSYGLSFFKPQ
PGYFERNFAINLYKVTGQFPWSSLRETDRGISTEINFPIWKTNHTLKWEGVWRELGCLAR
TASFAIREESGHSLKSSISHAMVIDTRNSTILPRRGFLFKVNQELAGYTGGDASFLKEDI
EIQLNRRLFWDSVFSASLWGGLLIPIGEKPSCIADRFYLGGPTSVRGFSMYSIGPQSEGD
YLGGEAYWAGGVHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPHAHLQKLAE
CIRWSYGAGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggggacagttcacgcccggagtctggatcccctccctatgacagggcctgactttgga
gttcatggagatgatgttgaatttgttgaagtgcagcctgaaagtaaacaggaagtccta
gaaaacaaagatgttatagtccaacgtgttcatattgatggcctgggaagaactaaggaa
gatttccttggatatgaaattgctgaactctttacagcaaaaaaccttattgatgtcatg
aaaaaggctcatgaggctagggagaagcttttacgtttgggtatttttcgacaagtagaa
gttgtcattgatacctgtcaagaggaagatgctctgcctaatggattagatgtcaccttt
gaggttaaagaaatgagaaggttaactggaagctacaatacaatggttggaaacaatgaa
ggcagcatggtactaggacttaagctgcctaacctttttggccgtgcagagaagctcact
tttcagttctcatatggtaccaaagagacctcctatggattatctttctttaaacctcaa
cctggatactttgaaagaaactttgccattaatctttataaagtaactggacagtttcca
tggagttcactgcgggagactgatagaggtatctctactgaaattaattttcccatctgg
aaaaccaaccacacgcttaaatgggaaggagtctggagagagctaggctgccttgccaga
acagcttcctttgcaattagagaagaaagtgggcattcactcaagtcctccatctctcat
gccatggtaattgacactcgaaactccacaattttacctagacgaggcttcctgtttaaa
gttaaccaggaacttgcagggtatactgggggcgatgccagctttctgaaagaggatatt
gagattcagttgaacagacgccttttttgggactcggttttttcagcttctctttggggt
ggattgctgattccaattggcgaaaagccttcttgcattgctgacaggttttatttaggt
ggccccacaagtgtgagaggcttcagtatgtatagcattggaccacaaagtgaaggagat
tatcttggtggtgaagcttattgggctggtggtgtacacctgtacactccgcttcctttc
cggccagggcgaggtggatttggagaccttttcaggacacacttttttctcaatgcggga
aatctgtgcaatctcaattatggtgaagggccacatgcccatcttcagaagttggctgaa
tgcatccgctggtcttatggagctggcatagtactgagactgggaaatattgcaagactg
gaattaaactactgcattcctatgggagtacagagcggggacaggatctgtgatggtgtc
cagtttggggcaggaatccgatttctgtaa
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