Polypterus senegalus (gray bichir): 120534336
Help
Entry
120534336 CDS
T08668
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120534336 (caprin2)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120534336 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
C1q
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
120534336
NCBI-ProteinID:
XP_039617780
LinkDB
All DBs
Position
8:141843705..141904167
Genome browser
AA seq
985 aa
AA seq
DB search
MVQLSPSPVLCLPTPDKTDEKMRVEEKQQVQQQQQEESPKLEQQIGLSSLQLALSTATTT
YQGYDTYIEDGLICLKHKIRNIEKKKLKLEDYTKRLNEGETLNTDQMEAVQKYDEVLHNL
KFAKELHKTFNALSQDLLKAQKKAVRREQVMKTEAEKKRLRTIFQVQFVLQSLEQEHVKK
DFRSGLNGAFFLSAKELDFLIRFSKMASLERNECMSLEDQMDQAAICFWELLEGNEKAVA
GTTCEVFFFFCQNLWRNTFQIQDKHLKDQLARLLDCGYFDHIPAPHNEMPEEEEKKGTKN
TVKLDLSTKITNETTKQLSVSEPSVPTPQKNDHPIREFINRHYKPETEYKVQEQSEKSWK
TELSTVNQEPPDSWEMQLLDDESPPPQPTPPKQWRAAATLVPKDAMELKGCISEPKPKRG
RKPKAEQEVKIQPQKRASSPIAVFNSPSSIPKDPLLRKEKLQDLMAEIQGSFSFMQDSDL
DSESSPNTKPLSQSSVLAASTPRAPRELKLLPPAIKTSPSTIHTSGTPKTNMINGERALS
DFEMDLATEEAAEESLPLETEPYVSSSPVYQNESNADSALESPQVASCSLPPTVSQGQVF
SSPPTSNHTISITTSPFKAMQTVFKVDAPLPPRESELKSDTVSYQESCSQTYSTASTQTP
PQCSILDQTTPVLESVTPVTSYQSDSPVSNGCHGYLSPGQTNTFPRSNQAFYNGRGAVRG
TVRGGRGLTTNSYRSPSAYKAPFEGYRGGVQSPSGNYIQPYPGREYTTMLYGSRETSFQQ
NYKRGSATIGQRTNSRAGWSDSSQVSSPERDNETFNSIDSGQGDSRCLTPVDMPVTSQAA
ALLPVHVYPLPQQMRVAFSAARTSNFAPGTLDQPIVFDLLLNNLGETFDMQMGRFSCPVS
GTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAVLQLFQGDQIWL
RLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctctccccttcccctgtcctttgtctccctactccggataagacggatgag
aaaatgagggtggaggaaaagcagcaggttcagcagcagcagcaagaggaaagcccaaag
ctagagcagcagataggcctgagctccttgcagctggcactctctactgcaactacaacc
taccagggctatgacacttacatcgaggatggtctcatctgcctcaagcacaagattcgc
aacattgagaaaaagaagctgaagctggaagattacacaaaacggctcaatgaaggagaa
accctaaacacggaccagatggaggcagttcagaagtatgatgaagttcttcacaatctt
aaatttgctaaagaactgcataaaacctttaatgcactcagtcaggatcttttaaaagct
cagaagaaggcagtacgacgtgagcaagtcatgaagactgaagcagagaaaaagcgtttg
cgcactatctttcaggtgcaatttgttcttcagagcctggaacaggaacatgtgaagaaa
gactttcgaagtggtcttaatggggctttctttctctcggctaaagaacttgactttttg
atcaggttctcaaagatggcttctttagagagaaatgagtgcatgagcttggaggaccag
atggaccaggcagcaatctgcttttgggagttgcttgaaggaaatgagaaagctgtggct
ggtaccacatgtgaggtttttttttttttctgtcaaaacctgtggagaaacacattccaa
atccaagataagcatttgaaagaccagttggcacgcttgttagactgtgggtactttgat
cacatcccggcccctcacaatgagatgccagaggaagaggaaaaaaaggggaccaaaaat
actgtgaagcttgatttatcaaccaagataacaaatgaaacaactaaacaactgagtgtg
tctgagccatctgtaccaactccacaaaagaatgaccatcctattagagagtttattaat
agacactacaagccagaaacagagtataaagttcaagagcagtcagaaaaatcttggaag
acagagttgtcaaccgtgaatcaagaacctcccgattcatgggagatgcagcttcttgat
gacgagtctccaccaccacagcctacaccccctaaacaatggagagctgctgccacactt
gtgccaaaggatgcaatggaactgaagggatgcatttcagaaccaaagccgaaacgtgga
cggaagcctaaagctgaacaagaagttaaaattcagccacaaaagagagccagttctcct
attgcagtattcaactctccttcttccattccaaaagatccccttttgagaaaagagaaa
ctgcaagatttgatggcagagattcaaggatcattcagttttatgcaggactctgatttg
gacagtgagagttcaccaaatactaagcctttaagtcagtcttctgtgcttgctgcctcc
acccccagagcgccaagggaactgaagctcctcccaccagctattaagacttctccatct
acaatccatacttctgggactcccaaaactaacatgataaatggagaaagggctttgagt
gactttgaaatggaccttgccacagaagaagctgcagaggaatctctgccattggagact
gagccctatgtttcctcctctcctgtgtatcagaatgagtccaatgcagatagtgccctg
gagtcccctcaggttgcgtcatgttcattgccacctactgtatctcaagggcaagttttt
tcatctcctcccaccagtaaccataccataagcataactacctctcctttcaaagctatg
cagactgtctttaaagttgatgctcctttacctccaagagagtctgaactgaaatcggat
actgtttcataccaagaatcttgcagtcagacatactccacagctagcactcagacaccc
cctcagtgctccatacttgatcaaaccacccctgtacttgaaagcgttactccagtaacg
tcttatcaatcagactctcctgtgagcaatggttgccatgggtatctgtcacctggtcaa
actaatactttccctcgttccaaccaagccttctacaatggccgtggcgcagtcagagga
acagtacgtggaggaagaggcctgacaacaaactcttatcgttcacctagtgcatataaa
gctccctttgaaggttatagaggtggagtgcagtcacccagtggaaactacattcagcca
tatcctggaagagaatatacaacaatgctgtatgggtcaagggaaacaagctttcagcaa
aactataaacgtggaagcgcaactattgggcaaagaaccaactctagagcagggtggagt
gattcttcacaggtgagcagtccagaaagggacaatgagaccttcaacagcattgactct
ggccagggggattcacgttgcctcactccagttgatatgcctgtgacaagccaagcagct
gccctccttccagtgcatgtctacccactcccccaacagatgcgtgttgctttctctgct
gcccgcacatcaaactttgctcctggcacattagaccagcctatagtttttgatctcctt
ctcaacaaccttggagagacttttgatatgcaaatgggaaggttctcctgtcctgttagt
ggaacctatgtatttatcttccacatgctgaagctggcagtcaatgtgccactttatgtg
aatctcatgaagaatgaagaggtcctggtatcggcatatgccaatgatggtgctcctgat
catgaaactgccagcaaccatgctgtgcttcagctgtttcaaggagaccaaatctggctc
cgtttgcacagaggtgctatttatgggagcagctggaaatattccactttttctgggtac
cttttgtaccaggattga
DBGET
integrated database retrieval system
