Polypterus senegalus (gray bichir): 120534922
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Entry
120534922 CDS
T08668
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120534922
04121 Ubiquitin system [BR:
psex04121
]
120534922
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120534922
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120534922
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
Lipoprotein_3
hAT-like_RNase-H
GSH_synth_ATP
Motif
Other DBs
NCBI-GeneID:
120534922
NCBI-ProteinID:
XP_039618360
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Position
9:148245579..148247392
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AA seq
502 aa
AA seq
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MIRTERWKAITEAITFYIATDMLPSYSVEKRGFNHMLKVLDARYVVPSCKYFADVALPHL
YNKTQEKIRSALEEMQFYSATTDLWSSRTMQPYLSLTVHYINTSWTLRSICLQTAYFPDN
HTGDIIAHGLKDALSSWGLSEERLVCMTTDSGTNIIKALKDNNWPSLQCFGHRLHNAIEN
GVKDPRIDRAIGVCKKAVSAFSYSWKKRRDMTEVQAELGLPQHLLISESPTRWGSRQKMI
ERFLEQEKAITRVLGADKKTRHLVPTWQDLEVLEATNKAVKPLQDFTDALSGESYVSVSC
IKPVLHLFKTSLLLPEEEDLELTKTIKANIMRYLESKYCDLEKKEFLDMATLLDPRFRTT
YIDASKLEVVKKRAVSEISALCNSTTEEAGPSAVQEKTPPKKKMTLGAFFKNSAPSTTPH
PQETELATYFLIPDIEPDTDPLEWWKLHQPNFPRLSLLAKKYLSIPAPSERVFSVGGGIV
TCNRACLKQEVVDRLIFLAKNV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgataagaacggagcgatggaaagcgattacagaggcgatcacgttttatattgccaca
gacatgctgccaagttattctgtcgaaaagcgaggctttaatcacatgctgaaagtatta
gatgcgaggtacgttgtccccagttgcaagtatttcgccgatgtagcgctacctcacctg
tacaataaaactcaggaaaagatccgcagtgcgctggaggagatgcagttttactccgcc
acaacggacctgtggtccagccggacgatgcagccatatctgagtctgacggttcactac
atcaacactagttggactctgcgcagcatctgccttcagacagcgtatttccccgacaac
cacactggtgacataattgcccatggcttaaaagacgctctcagctcctggggactttcg
gaggaacgactcgtctgcatgacaactgatagtggcaccaacatcataaaagcccttaag
gacaacaactggcccagcttgcagtgttttggccacagactccacaacgctattgagaat
ggtgtgaaggatccaaggatcgatcgggccataggggtctgcaaaaaagctgtatcagcc
ttctcctacagctggaaaaaaaggcgagacatgacagaggtgcaggctgagcttggactt
ccccagcatcttttgatctcagaatccccaacccgttgggggtctcgtcaaaagatgatt
gagcgctttcttgagcaagagaaggcaataactcgtgtcctgggtgcggacaagaaaacg
cgtcatcttgttcccacgtggcaagatttggaagtattagaagccaccaacaaagcagta
aaacctctccaggacttcactgatgcactgtcaggggaatcatatgtcagtgtgtcatgc
atcaaaccagtgctgcatttgtttaaaacaagtctcctcctgccagaggaggaagatttg
gagctaacaaaaacaatcaaagctaacatcatgcgttacctcgaaagtaaatactgtgat
ttggagaaaaaggaatttttggacatggccacacttttagacccgaggtttcgtacaacc
tacattgatgcaagcaaactggaagttgtcaaaaaaagagcagtgtctgagatctctgct
ctctgcaactctaccacagaggaagctggtccctcagctgttcaagagaaaaccccacca
aaaaagaaaatgactctgggtgccttctttaaaaacagtgcaccatccaccacgccacac
ccacaagagactgagcttgcaacgtatttccttattccagacatagagccagacacagat
cctcttgaatggtggaagctgcatcagcccaactttccaaggctaagcttactggctaaa
aaatatctttctattccagccccctcagagagggtatttagtgtgggtgggggaatagtt
acctgcaaccgggcctgccttaagcaagaggttgtggacaggctcatctttcttgcaaaa
aatgtttag
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