Polypterus senegalus (gray bichir): 120535052 Help Entry 120535052         CDS       T08668                                  Symbol setx Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism psex  Polypterus senegalus (gray bichir) Brite KEGG Orthology (KO) [BR:psex00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:psex03021]     120535052 (setx) Enzymes [BR:psex01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      120535052 (setx)     5.6.2.5  RNA 5'-3' helicase      120535052 (setx) Transcription machinery [BR:psex03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      120535052 (setx) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SEN1_N AAA_19 Viral_helicase1 AAA_30 ResIII UvrD-helicase AAA_16 AAA_22 SLFN-g3_helicase Rad17 UvrD_C_2 Motif Other DBs NCBI-GeneID:  120535052 NCBI-ProteinID:  XP_039618505 LinkDB All DBs Position 9:753548..876393 Genome browser AA seq 2467 aa AA seqDB search MSTCRWCTPGGQEATCFMKKYASGTLSAEEKEAANEDLSFCFECVVEYHRARDQLPSFHK ILWKLETFRLINHLEKAMKGEPNQDDLYIVEDHQEIQISNVTGPDLENNLRIPLLEIMKY PYLLLHLQIGDLCVEAFHKIESDNSFQVFEKHAGIYLLLVHPDEIVRKWAIRTARSLGKV DRDDFYDLQDVVSCMFKVIELDLFVNSDIYNSDGMEEGKLILLPPHLYETNNYKNYWLGI CMLLTVLDAQAMDTLLLGPDRQSNLMQSILNTMEKRPEDDDQDPFWPALQCFMVILDRLG SKVWAMLIDPNATFQTIIRSPSYNKEVEHLRRNTSGPRVKVEPEADDDMVTCSQIVYDTN TNKQSKDAANRHPMGIENCIVMYEEMQSLVNVLQSDIGQDIRIHDSTFLWFFPFVRSVMD LNSLSVVYVGEIIHHLHTEIKDLLTGRLQHCDKVTEFFVLILVFVVELHRSKNCMNLLWY TSHCWIEVLVKCATVYSPAFSQPTDSSSRVSSTTSVHPQVIGVVPQACIQLIRSLLRDGC QLYPELSCKQYLDMLNRQMRRGFNQGWNLSPAQLQDLQSCLMSLVKNMQNLVPSVKNTLP PEEPALNSKHENARRESEQRPFDCQDEQHGTPSDQQRGVHLKKEPPWDEEYCVHSRLEKT KPAKQNEKSCSSAGKAFNKDVESVSDSHASVQDRLNYLKSKLNSTDLLAKLSKVISPSQI KKENVEDCSVSEKRASSHDGTKEQKEKSLVGETSAVPRTIKQEPKWPPSKQQPLGDDEMR SSSDDDVPLTVLKSNLRKKVANVTDGEDTLTPSQVDKDLSFLSLAALTKSFNFPDTSSQE SSMQCPNRVERKVKRMKKKLEADDVAVAEVSAVKDPVIVISDSSDEDAGLSEKEPEDNRS NANPEEVSGSSHGRAAEKTSEENLGLNSYDASYECDSQFFEHETQEDIYSAWEKSDGNLK DSTDTGAPSPVPVEMYDNWGYDTDYVPDDQIEMVAAEAEEQLRCAEGLNQNTSSASSASV AITNKSEAKVSPLGESTHQRKLCGVKSAGVEAAAAAICAPDGYKKTQMLVQPEKPAKSTT CLSTETSKASKVSPQSIEKNSPSTSHLSEKMPPTASASAVVPTEKVRPQEDLCITEKLCL KKKPRQGEVSRNSLSSIEELRRQGRDVQIENRSRRSRKSKGNRPPKSAGKGISKINPQDL QFLLQCRPKDLQKASKMPPSAPAPPKQAIPCQSNSFVSKVSDVASPKLPPPKKAEPMSSD VKKASYKDIDFFPLSQLGPDSEDEDDNMKQAGTSAEDNPEQGVRCDQSLHPPLAGEKDQP GVENSKAVGDDDDDDDFMQNLTQLDPIDMEVCSQVETSDEFYVNQNIPAGQGSVGDLYGL RPSIKPANDQPAAVQSEGLAALKPLVEAKEDAHVFLVPGLPISEQKALKPSTTKIYASTS RSATLAQELEKPTKTAGLKKIVRPLLPSRSSTALPAPSRPQPVNGQEREMRSNASPRVSI PPNPVLSIPRPVMHQNPDTPKATSLLPANLDPKFFIQEILKWSYEMFDNFPQFGAPDHLC KFPSKEVPDRFQSFEEYFCTFYPLLMMNTFEEMVQEWLRNSKPNKAYETNLTIKTVECPY KYYLGTFTATLNNSQVQRQLYPKEDDMVFLWLPQYLNPYTNDEREMESVPYVGCVSKSAV VTGQNDRSAILHVTIETCGNISVINDQLVKCKVIGSLVSAGRVFKALHSLRNGFMTKLLL TPQVTYFKPMSHEPTSDWNFEDFNGEQIKAINSAFSMTRQPVRTPKICLIHGPPGTGKTK TIVGLLQLIFSKVHRNENFIANQRLKSKRPRVLLCAPSNAAVDHLMKKIILSFKNKCKDE GRPPLGNCGDINLVRLGVEKSIMKDLTAFSLDNQTKARIERANFEQDRAIDRYIQELDAG LERLSHMCAQFKKDHVKYQVLMDEKLQLFKERERLGRQQKQNRMRKQEAQTRILQDAHVI CCTLSTSGSILLEVAFRRLGQDPFTCVIVDEAGQATETETLIPLTYRCATLVLVGDPEQL PPTVVSQKAKERKYDQSLMARLWKCLHRDIKQNPSIPNPINFLTMQYRMHPDICLFPSNY IYNRALKTDGATAEQRCSIRWPFQPYCIFDVLDGRETKEGDSYVNHQEVKLVMELIKLVV GKQKGRVGVITHYSAQKNRIREILNKEKKNDSMKLLQCVEVDTVDGFQGQEKDCIIVSCV RASSSKGSIGFVGNKQRLNVTLTRAKQSLFILGHLKTLMDHRDWSALIQDAHKRGNIIRT QEKDYKKDAVKIFKPEPGLNRSLSYPPSDSSRSQPKPSGSSPAPTSSNQGLVPPASSHST APISAAATVDRRHTTETLTAVATQVLKSCLALPSVRPPMPKETSKDPRLASRRRDTPKNQ PSTEKGPAAANRMQSSSNPGKTLPVPARDDGRAPPFRERHPRWEDQARPPKRPLDSREYD VSHKRQK NT seq 7404 nt NT seq  +upstreamnt  +downstreamnt atgagcacatgtcgctggtgtacccctggtggccaggaggccacttgttttatgaagaag tacgcttctggaactctctctgcagaggaaaaggaagccgccaatgaagatcttagcttc tgttttgagtgcgttgtggagtatcacagagccagagatcaactgccatcattccacaag attctgtggaaactggaaacctttcgcttgatcaatcatttggagaaagccatgaaaggg gagccaaaccaggatgatctgtatatagtggaagaccatcaagaaatccaaatttctaat gttacgggtcctgatctggaaaataaccttcgaattcccttacttgaaataatgaaatat ccttatctactgttacatctgcagataggtgatctgtgtgttgaagccttccataaaata gaaagtgataactccttccaggtttttgaaaagcatgcagggatttaccttctgctcgtt catcctgatgaaatcgttcggaaatgggcaattcgtactgcaagatccttgggaaaggtg gatcgtgatgatttctatgacctccaggatgtggttagctgtatgtttaaggtcattgag ctggatctgtttgtgaactccgatatatacaactctgatggcatggaagagggcaagctg attctgcttccacctcacctctatgagaccaacaactataaaaactactggttaggtatc tgcatgctgttgacagtcctggatgcacaggctatggatactttgttattgggacctgac agacaaagtaacctcatgcagtcaatccttaacaccatggagaagaggccagaagatgat gatcaggatcccttctggcctgcattacagtgttttatggtgattctggatcgacttggc tcaaaggtgtgggccatgctgattgacccaaatgctacttttcagaccataattcgaagt cctagttacaacaaagaggtcgaacatcttcgcagaaatacctccggacctagagtaaaa gttgaacccgaggctgatgatgacatggtgacctgcagtcaaattgtgtacgacactaac acaaataagcaaagcaaggatgcagccaacagacaccccatgggaattgagaactgcata gtcatgtacgaagaaatgcagtctcttgtcaatgtgctccagtccgacatcggtcaggac attcgtattcatgacagcaccttcttgtggtttttcccgtttgtccggtccgtcatggat ctgaactcgctgagtgtggtctacgttggagagatcattcaccacctgcacacagaaatc aaagacctcttaactggacggcttcagcattgtgataaagtcaccgaattttttgtcctc attttagtttttgttgttgaactccaccggagtaaaaactgcatgaatctgctgtggtac acttctcactgctggattgaagtgcttgtgaaatgtgccaccgtttatagcccagccttt agccaacccacggacagctcttcacgagtgtcttcgaccacatccgtacaccctcaggtg attggcgtggtccctcaggcctgcattcagttaatacgcagccttctaagagatggctgc cagctgtatccggaactttcttgcaagcagtatttggacatgttgaaccgacagatgcgc agaggcttcaatcaaggatggaatctcagtcctgctcaattgcaagacctacagagctgt ttaatgtcgctcgttaaaaacatgcaaaatcttgtgccttcggtgaagaacacattgcct cctgaagaacccgctctgaactcgaagcatgaaaacgccagaagagaatctgaacaaaga ccctttgactgccaagatgagcagcacggtactccatcggaccaacaacgtggtgttcat cttaaaaaagaacctccttgggatgaagagtattgtgtgcattctcgtctcgagaagaca aagcctgcaaagcagaatgagaagagctgcagctcggcaggaaaagctttcaataaagat gtggaatctgtgtctgactcgcacgcttccgtccaggacagattgaactacttgaaatcc aaactgaattcgactgacctgttggctaaactttccaaggtaatatccccttctcaaatc aaaaaggaaaatgtcgaagattgttctgttagtgagaaacgcgcctcgagccacgacggc accaaagaacagaaggagaaaagccttgtgggtgagacatcggctgtgccccgaactata aagcaagaacccaaatggccacccagcaagcagcagcccttgggtgatgacgaaatgaga agtagcagcgatgatgatgttccactgacagtgttaaaatccaatttaagaaaaaaagtt gctaacgtgacggacggtgaggacacgttgactccttcccaggtcgataaagatctgagc ttcctctctttagctgcactgacgaaaagttttaactttccagacacctcaagccaggag tcctccatgcagtgtccgaacagagttgagagaaaagtgaaacgaatgaaaaagaaattg gaggccgacgatgttgcagtggcggaggtaagtgccgtcaaagatcctgtaatcgtaata tctgattcctctgatgaagatgccggcttgtctgaaaaggaacccgaggacaatcgctcg aatgcaaacccagaggaggtgtcggggtcttcccatggccgagctgccgagaaaactagt gaagaaaatcttggcctaaattcttatgatgcctcttatgagtgcgattcccagtttttt gaacatgaaactcaagaagacatctactcggcctgggaaaagagtgatgggaacttgaag gactccactgacacaggggctccgagcccagtgcctgttgaaatgtatgataactggggg tatgataccgattatgtgccagatgatcaaattgaaatggtggcagcggaggctgaagag cagcttagatgtgcagagggacttaaccagaataccagttcagcatcttctgcatcagta gcgattacgaacaaaagtgaagccaaagtgagccccctgggagaaagcacacaccagagg aagctctgtggtgtgaaaagtgctggtgtagaagcagcagctgcagccatctgtgcccca gacgggtataagaaaacccaaatgcttgtacaaccagaaaaacctgcaaaatcaactacg tgcctttcaacagaaacgtcaaaggccagtaaggtgtctcctcaaagcattgagaaaaac tctccttcgacatcccatttatcggaaaaaatgccacccactgcctcggcatctgcggtt gtgcccactgaaaaggtacgtccacaggaagacttgtgtattaccgagaagctttgcttg aagaagaaaccacgtcagggggaggtgtctcgaaactccttgagcagcattgaagagctc cgtaggcaaggacgagatgtgcaaatagaaaatcgaagccggaggagtcgaaagagtaaa ggaaaccgtcctccgaagtcagcgggcaagggcatatctaagatcaatcctcaggacctc cagtttctcctacagtgcagaccaaaggatttacagaaggcttcaaaaatgcccccttct gcacctgcaccccctaagcaagccattccttgccaaagtaactcctttgtcagcaaggta agtgatgtggcatcaccgaagcttccaccgccgaagaaggctgagccgatgtctagtgac gtgaaaaaggcttcgtacaaagacattgacttctttcctctgtctcagcttggtccagat tctgaggacgaggatgacaacatgaagcaggctggtacctctgctgaagataatccagag caaggagtacgttgtgaccagagccttcatcctccactagcaggagaaaaagatcagcct ggtgtggaaaacagtaaagcagtaggagatgatgatgatgatgatgattttatgcagaat ttgacccagcttgatcccattgacatggaagtgtgctctcaggtagaaacttcagatgag ttttatgtcaaccagaatattccagcaggtcaaggctctgtgggcgacttgtatggtctg aggccttccattaaacctgcaaatgaccagcctgctgctgtccagtcagaaggcttagca gctctaaaaccactagtggaagcaaaggaagatgcgcatgtattccttgtgcccggattg cccatatctgagcagaaagctctgaaaccttccacgacaaagatctacgcctccaccagt cgaagtgctaccttagctcaggagctggagaaacccacaaaaacggctggtttaaaaaaa attgttcgtccactcttgccttcgaggagcagcacagctctgcccgctccttccaggcct caaccggttaatggacaagagcgtgaaatgagaagtaatgcatcgcccagggtcagcatc cccccaaaccccgttctgtccatccccaggcctgtgatgcatcagaaccctgacacacct aaagccacctccttactcccagccaaccttgaccccaaattcttcatacaagaaatcctg aagtggtcctatgagatgtttgacaactttcctcagtttggagctccagaccatctgtgc aagtttccatcaaaggaggtaccggacagattccagtccttcgaggagtacttttgtacg ttttaccctttgctgatgatgaacacgtttgaggagatggtccaggagtggttgaggaat agcaaacccaataaagcatatgaaacaaatttgaccattaaaacggtggagtgtccatat aaatactacttaggaacttttacagcgaccctgaataacagccaggtgcagagacagctg tatcccaaagaagatgacatggtcttcctgtggcttcctcagtatttgaatccatataca aacgatgagagagaaatggagtccgtcccgtatgttggctgtgtctccaagtctgcggtt gtcacaggtcaaaacgacagaagtgcaattctccatgttacgattgagacttgcggtaat atatccgtaataaacgatcagcttgtcaagtgcaaagtgattggatcgctggtgagcgct gggagagtttttaaggccttgcattcgctccggaatggcttcatgaccaaacttttgctc actcctcaagtgacctattttaaaccaatgtcccatgagccaacatctgattggaatttt gaggattttaatggtgagcaaataaaggcaatcaacagtgcgttttcaatgacgaggcag cctgtaaggactcctaaaatatgcctgattcatggaccaccgggaactggcaaaactaaa accatcgttgggctcctgcagttgatattttctaaggttcacagaaatgaaaattttata gcaaaccagcgtttgaagagcaaacggccaagagtcttactttgtgctccgtccaatgct gcagttgaccatctcatgaaaaagattattctgagctttaagaataaatgcaaagatgag ggacgaccaccactgggtaactgcggagatataaatctggtacgactgggagtggagaaa tccattatgaaggatctcacagcttttagtttggataaccagactaaagccagaatagag cgagcaaactttgaacaggaccgggctattgaccgatacatacaagagctcgatgccggg cttgagagactctcccatatgtgtgcacagtttaagaaagatcatgtgaagtaccaagtg ttgatggatgaaaagttacaattgtttaaagagcgcgagagactgggcaggcagcagaaa cagaacagaatgcggaagcaggaagcacaaaccagaatcctccaggatgcccatgtgatt tgctgcaccctgagcaccagtggcagtatcttgttggaagtagccttcaggagattagga caagatccattcacttgtgtcattgtagacgaggctgggcaggctactgagacggagact cttattccacttacctacagatgtgccacattggtccttgttggagaccctgagcagctg ccccctacagttgtatcacagaaagccaaagagcgaaagtatgaccagtcattgatggct cggctgtggaagtgcctgcaccgggatattaagcagaaccccagcatcccaaacccgatt aattttcttaccatgcagtacagaatgcaccctgatatatgcctgtttccttcaaattac atctacaatagggctctaaaaacagatggagctacagcggagcagagatgcagcatcaga tggccttttcagccgtattgcatctttgatgttttggatggccgtgaaacaaaggaagga gattcctatgtcaaccatcaagaagtgaagctcgtgatggagctgattaaactggtggta gggaaacaaaaaggacgtgttggagtcataactcattatagtgcccagaagaacagaatc cgagaaatcctcaacaaagaaaagaaaaatgattcaatgaagcttttgcagtgtgtggag gtcgacactgtggatggcttccagggtcaagagaaagactgcattatagtttcttgtgta cgagccagcagttcaaaaggctctattgggtttgtgggaaataaacaacgattaaatgtt acactgacaagagcaaaacagagcctctttatcttggggcatttgaagaccctcatggat cacagagattggagtgcattaattcaagatgctcacaaacgaggcaacatcatcagaacc caggaaaaagactacaaaaaagacgcagtgaagattttcaaacccgagcctggcttgaac cgcagcttatcgtatcccccgtcagactcctccagatcccaacctaagccttcggggtct tctccggcaccgaccagtagcaaccaaggcctcgtgccaccagcctcttctcactccaca gcccccatcagcgcggccgcgacagtggacagaaggcacactacggaaaccttaacggcc gttgctactcaggtgctgaagtcctgtctggccctcccttcagtaaggccccccatgcca aaggagacttcaaaagaccccaggctggcaagtaggcggcgtgataccccaaaaaatcag ccatccactgagaaaggcccagctgctgctaacaggatgcaaagctccagcaaccccggc aagactttaccagtgccagctagagatgacggaagagcgcctcctttcagagaacgacat ccacgatgggaagaccaagcccgccctccgaaaaggccgctggactcgagggaatatgac gtttcacataagcggcagaagtga

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