Polypterus senegalus (gray bichir): 120535157
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Entry
120535157 CDS
T08668
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120535157
Spliceosome [BR:
psex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120535157
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
dsrm
Dicer_dsRBD
SGP
DUF6857
Motif
Other DBs
NCBI-GeneID:
120535157
NCBI-ProteinID:
XP_039618712
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Position
9:27957871..28264406
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AA seq
676 aa
AA seq
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MRSIRSFANDDRHVMAKHSTIYPSSEELEAVQNLVSTVERALKHVSDWLDEVNKMVKPDK
EDIKTEDSSDSNAMDQRSGALCGVMRIGLVAKGLLIKGDMDLELVLMCKEKPTEALLCTV
CDNLPPQIQKLTEDTYQLKKCIDEAAILICNTKHPNLCLKVTLTSPRMREDLEKTDGENV
VLKDPPDLLDRQKCLKALASLRHAKWFQARVNGLKSCVIVLRILRDLCNRVPTWEPLKGW
PLELICEKAIATCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEKELTNTLCSLTVQ
QAEDITFSAQHALRLLAFGQIYKVLEMDPLPSNKPTQKFTWIDKEGISLKRPYEDGTGDD
KDLIKKMKRNLRKILDSKTLDANQPMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVD
VEGTIYEASGPSKKTAKLHVAVKVLQAMGYPTGFDTDMDSMSADEKSDSEGKNETLSTNL
SNNSASSTTDSSNTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKRFVM
EVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAIGNKKKKIISQSKGVVAAAASIA
AQAMRGRGRGALARGTFLSAATPGYLAPGYGAPYGYSAAAAAPAYGGFFIDNPFYQPRTI
APLIIHLGPQDFFSDF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccatacgatcctttgctaatgatgaccgccatgttatggcaaaacactctaca
atctacccttcatcagaggaactggaggctgtccagaacctggtctccaccgttgaacgt
gccctgaagcatgtctcggactggttagatgaagtcaacaagatggtgaagccagacaaa
gaagacattaagactgaggacagttctgacagtaatgcaatggatcagagaagtggggca
ttgtgtggcgtaatgagaattgggcttgtggctaagggtttactgataaaaggcgacatg
gacctcgagcttgttctcatgtgcaaggagaagcctacagaggccttgttatgtacagtg
tgcgacaaccttcctccacagattcagaaacttacagaggacacctatcaattaaaaaag
tgtatagatgaagcagctatcttgatctgcaacacaaaacatccaaatttatgcctgaag
gtgacccttacttctcctcgtatgagagaagacttggagaagactgatggagaaaatgtt
gtgctgaaagatcctccagacttattggacaggcagaaatgcctaaaggccttggcgtct
ctgcgacatgccaaatggtttcaggcaagagttaacggattaaaatcatgtgtaattgtt
cttcgtattctccgggatttgtgcaacagagtacccacatgggagcctttaaaaggatgg
ccacttgaactcatttgtgaaaaggctattgccacttgtaatagacccctgggggcaggg
gaagctcttcgtcgggtaatggagtgcctggcttctggaattcttttgccaggtggtcca
gggctacatgatccatgtgaaaaagaactaacgaacacactttgcagtttgacagtccaa
caagcagaggatattacattcagtgcacagcatgcgttaaggctcctagcatttggccaa
atttataaagttttagaaatggaccctctgccgtcaaataagcctactcagaaatttacc
tggatagacaaagaaggtatatcacttaagagaccatatgaagatggaacaggggatgac
aaggatctgattaaaaaaatgaaacgaaacttaaggaaaattcttgacagcaaaacatta
gatgccaaccagccaatgaatgctttgatgagactaaatcaaattcgtcctgggctccag
tacaagttgttatcacagtctggtcctgtacatgcacctgtctttactatgtctgtagat
gtagaaggaaccatctacgaagcctcaggaccatccaaaaaaacagcaaagcttcatgta
gcagtgaaggttttacaggcaatgggttaccctactggctttgataccgacatggattca
atgagtgcagatgaaaaatcagatagtgaggggaaaaatgaaacattgtctacaaattta
agcaataattctgccagctctaccacagacagctctaacacactggaggttcgaactcag
ggtcctattctaactgctagtgggaagaacccagttatggagttgaatgagaaaagaaga
ggcctaaaatatgagcttatatcagaaactggtggaagtcacgataagcgctttgtaatg
gaggtggaagttgatggacagaagtttagaggtgctggacccaataaaaaagttgcaaaa
gccagtgctgcgcttgcggctcttgaaaaacttttttcagggcccaatgcaataggcaat
aagaaaaagaagattatatctcagtcaaaaggggtggtagccgcagcagcatctattgca
gcccaggccatgagaggcagaggaagaggggctttggcaagaggaacttttctcagtgcc
gctacaccaggatatttggcaccaggttatggagcaccctatggatacagtgctgcagct
gctgccccagcttatggtggttttttcattgacaatcccttttaccagcctcggaccatc
gcacctcttataattcacttgggtcctcaagatttcttctccgacttctag
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