Polypterus senegalus (gray bichir): 120535183
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Entry
120535183 CDS
T08668
Symbol
aars1
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120535183 (aars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psex01007
]
120535183 (aars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psex03016
]
120535183 (aars1)
Enzymes [BR:
psex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
120535183 (aars1)
Amino acid related enzymes [BR:
psex01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120535183 (aars1)
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120535183 (aars1)
Prokaryotic type
120535183 (aars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Med11
vRNAP_dom
DivIC
Motif
Other DBs
NCBI-GeneID:
120535183
NCBI-ProteinID:
XP_039618774
LinkDB
All DBs
Position
9:31784600..31819389
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AA seq
968 aa
AA seq
DB search
MDSTLTASQIRQKFIDFFKRHDHEYVHSSATVPLDDPTLLFANAGMNQFKPIFLNTIDPT
HPMAKLQRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACQLALD
LLTKEFGILIERLYVTYFGGNEEAGLEPDLECKQIWLDLGMDESRILPGSMKDNFWEMGD
TGPCGPCSEIHFDRIGGRDAAHLVNQDDPNVLEIWNLVFIQFNREPDSSLKLLPKKSIDT
GMGLERLVSVLQNKMSNYDTDLFLPYFDAIQKGTGARPYTGKVGAEDSDGIDMAYRVLAD
HARTITIALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNAQKGFFASLVDVVVNSLGGA
FPELNKDPDMVKDIINEEETQFLKTLSRGRRILDRKIQSMGDSQVIPGDTAWLLYDTYGF
PLDLTSLIAEERGMKIDLDGFEEEKKAAQLKSQGKGTGDDDHIMLDIYAIEELRSKDFQP
TDDSPKYSYRVDGSGNYVFDVAVGTVLALRREKMFVDEVTTGQECGVLLDSTSFYAEQGG
QIFDEGYMVREDDSSEDKMEFTVKNTQVRGGFVLHIGTVYGTLKVGDKVKLHIDEARRRL
VMSNHTATHILNFGLRSVLGEADQRGSLVAPDRLRFDFTAKGAMSTEEIRKTEEIVCSMI
QSAKPVYALDAALATAKAIQGLRAVFDETYPDPVRVVSIGIPVQDLLQDPSGPAGSLTSI
EFCGGTHLLNTIHAEPFVIVSEEAIAKGIRRIVAVTGPEAQKAIRKADSLKQSLSELEKK
VNVQTAPNKDLQKEIADMTETLGSAVIAQWQKDTLRETLKGLKKTMDDLDRSSKADVQKR
VLEKTKQLIDSNPNQPLVVMEMENGASAKALNESLKLFKANSPQTAAMLFAVDSEAEKIT
CLCQVPQDTADHGLKANEWVQQVCTLMDGKGGGKDTSAQATGRNTGCLQEVLQMAKDFAH
LKLGDLKN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggactcaacacttacagcttctcagattcgacagaaattcattgacttctttaaaagg
catgatcatgagtatgtgcactcttctgctacggtgccgttggatgatcccacactgctg
tttgcgaatgctggcatgaatcagttcaaaccaatttttttaaataccattgatcctaca
catcctatggcaaaattgcaacgagctgctaacactcagaaatgcattcgtgctggagga
aagcataacgacttggatgatgttggcaaagatgtatatcatcacacattttttgaaatg
ttgggctcatggtcatttggtgactatttcaagcatctagcttgtcagttagcactggac
ctgctgactaaggagtttggcattttaattgagaggttgtacgtaacttattttggagga
aacgaagaagctgggctggagcctgacttggagtgcaagcagatctggctggacttgggg
atggatgaaagccgcatattacctggaagcatgaaggataacttttgggaaatgggagac
actggaccttgtggcccatgtagtgagatccattttgatcgtattggaggtcgtgatgca
gctcatcttgttaatcaggatgatcccaatgtattggagatctggaatcttgtctttatc
caattcaacagggagcctgatagttccttgaaactgctacctaaaaagagtattgacaca
ggaatgggtttggagaggctggtatcagtgctgcagaataagatgtccaattacgacacc
gatctgtttttgccttactttgatgccattcaaaagggtactggggcacggccttatact
ggaaaggttggtgccgaggattcggatggaattgatatggcataccgtgttctggccgat
catgcccgaaccatcactattgcactggcagatggaggacgtccagataacaccgggcgt
gggtatgttctgcggaggatcctgcgtcgtgcagtcagatactctcatgagaaactaaat
gcccaaaagggtttctttgcctcacttgttgatgtggttgtgaactcactgggaggagca
ttccctgaactaaacaaagatccagacatggtgaaagatattattaatgaggaagagaca
cagtttcttaagactcttagtagagggcggagaattcttgatcgaaagattcaaagtatg
ggagatagccaagtcatcccaggtgacactgcctggctactctatgacacctatggcttc
ccactggatcttacttctctcattgccgaggagagaggcatgaagattgatcttgatggt
tttgaggaagagaaaaaagctgcacagctcaagtctcaaggaaaaggtacaggagatgac
gatcacatcatgcttgatatctatgctattgaagaactgcggtccaaagattttcagccc
actgatgattctcccaaatatagctatagagttgatggttctggaaactatgtgtttgac
gtggctgtggggactgtcttggctttgcggcgggagaagatgtttgtagacgaggtgacc
actggccaggagtgcggagtgttgctggacagcaccagcttctatgctgagcaaggaggg
cagatatttgatgaaggctacatggtccgtgaggatgacagctctgaggataaaatggag
ttcactgtgaagaatacgcaagtcagaggtggctttgttctgcacattggcactgtatat
gggacactgaaagttggtgacaaagtgaagctacacattgatgaggcccggcgacgatta
gtcatgagtaatcacacagccacacacatcttgaattttggcctgcgctctgttcttggg
gaggcagatcagagaggttctcttgtggcaccagacaggcttcgttttgactttactgca
aagggagccatgtcaacagaagaaattcgcaagacagaggagattgtatgctctatgatc
cagagtgcaaagcctgtctatgcattggatgctgctttagccacagccaaggccattcaa
ggtttaagagccgtttttgatgagacctaccctgacccagtgcgtgtggtctccattggc
attcctgtccaagatctgctgcaggaccccagtgggccagctgggtccttaacctcgatt
gagttctgtggaggaacgcatttgctcaacactattcacgctgaaccctttgtcattgtt
tctgaagaggccattgctaagggtatacgccgcattgtagctgtgacaggtcctgaagcc
cagaaggccataaggaaggctgattcattgaagcagtctctctctgaacttgaaaagaag
gtcaatgttcaaactgctcccaacaaggatctacaaaaggaaattgctgatatgactgag
acgcttggctcagcagtgattgcacagtggcagaaggatacgctgagggaaactctaaag
gggctgaagaagaccatggatgaccttgacaggagcagcaaagcagatgtgcagaaaaga
gtcctggaaaaaacaaagcaattaattgatagcaatcccaatcaaccactagtagtaatg
gaaatggaaaatggagcttctgcgaaggccctcaacgagtctctaaagctgtttaaagcc
aactccccccagactgcagccatgctgttcgctgttgattcagaagcggagaaaatcaca
tgtttatgtcaggtgccacaggacaccgcagaccatggtctgaaagcaaatgaatgggta
caacaggtatgcacactaatggatggcaaaggtggtggaaaggatacttcagcccaggcc
accggcaggaatacaggatgcctccaggaagtcttgcagatggctaaagactttgcacac
ctgaaactgggagatctgaaaaattaa
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