KEGG   Polypterus senegalus (gray bichir): 120535203
Entry
120535203         CDS       T08668                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03020  RNA polymerase
psex03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120535203 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120535203 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psex03021]
    120535203 (polr2d)
   03400 DNA repair and recombination proteins [BR:psex03400]
    120535203 (polr2d)
Transcription machinery [BR:psex03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120535203 (polr2d)
DNA repair and recombination proteins [BR:psex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120535203 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Maelstrom
Other DBs
NCBI-GeneID: 120535203
NCBI-ProteinID: XP_039618810
LinkDB
Position
1:170731500..170737886
AA seq 144 aa
MAAGGAPGTGLVGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSL
EGRFEDEELQQILDDIQTKRSFQY
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcggcaggaggtgctcctggtactggactggtgggtgatgtggaagaggatgcgtct
caacttctttttccgaaagaatttgagaatgcagaaactctactaaactctgaagttcat
atgctactagagcaccgcaagcagcagaatgagagtgctgaggatgaacaggagctgtct
gaagtcttcatgaaaacattaaactatacagcccgttttagccgcttcaagaatcgtgag
actattgccagtgtccgcagcttgctgctccaaaaaaaactgcacaagtttgagctggcc
agtttggctaacttgtgtccagaggctgctgaggaggccaaagcactcattcccagcttg
gaaggtcgctttgaagatgaagagcttcaacaaatcctggatgatattcaaacaaaaagg
agttttcagtattag

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