Polypterus senegalus (gray bichir): 120535209
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Entry
120535209 CDS
T08668
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04217
Necroptosis
psex04622
RIG-I-like receptor signaling pathway
psex04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120535209 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120535209 (cylda)
04625 C-type lectin receptor signaling pathway
120535209 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120535209 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120535209 (cylda)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120535209 (cylda)
Peptidases and inhibitors [BR:
psex01002
]
Cysteine peptidases
Family C67
120535209 (cylda)
Ubiquitin system [BR:
psex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120535209 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
120535209
NCBI-ProteinID:
XP_039618815
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All DBs
Position
9:33311704..33372223
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AA seq
965 aa
AA seq
DB search
MSSGLWNQEKPNTSFWEDPKFYIVLQECLLEKQPQKYVKIPRGSIGQACQEHSSLGRPIP
TNKGKKSLKILDQTNVTLSIDEKDVTEIDEKLSELLFAITNCEERYCLFKNKPRLERARE
IDCGSKVRVLLRSGDDKLPGVVRYKGPLMPERALLGIWFGVELLEEGRGHGFTDGSYQGK
QIFRCEDECGVFVALDKLELWEDYEEDEDEEEEEEEEDQDVESDHAPLVDPRDPEYFTLE
INSRVLVKLQDGSKEYGTVIYCDMLSLNDGYEYFVGVDMDHPIGDWNGFINGKLVCNFAS
MEYTRLVPFCDVIPVTEFSMQDQHLQKHGFAPRGSGEKNMSSQNKPKNKGFTPQSGNRSR
SEFYYTLNGTSVDHPPQSKSKSTWYIDEVGEDPAKSLVDTSPGFSPSSPPSKAPPTPSLS
SENKFHSLPFSLTKKMGSNGSIGHTQLSLSVQSVMGDGHVAAGPETAVITVPVRNQFGLE
VGSLVEVKENPPLYGVIRWIGQPPGLQEPLAGLELDDESAGCTDGTFKGSRYFTCAPKKA
LFVKLRSCRPDSRFPPSHHSSNQIERCNSIAFGGYLSEVVEQNTPPKMEMEGLEVMVGKK
KGIQGHYNSCYLDSTLFCLFAFSSVLDTVLLRPRSKSDVESYRETQELLRTEIVNPLRIH
GYVCATKIMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKVRSAGQKVQD
CYFYQIFMDKNEKIGVPTSQQLLEWSFINSDLKFAEAPSCLILQMPRFGKDFKMFNKIFP
SLELDITDLLEDTPRECRICAGLALYECRECYDDVTIMPGKIKQFCEKCNMQVHLHPQRK
GHKFGKLSIPRELVDSSWRQSRFPQQKMELFAVLCIETSHYVAFVKYGSGDSAWLFFDSM
ADRDGGQNGFNIPQVTPCPEVGAYLKMTPEELHALDPKSIQGFARRLLCDAYMCMYQSPS
MSLYK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcttatggaaccaagagaagcccaacaccagcttctgggaggaccccaag
ttttatattgtactgcaggaatgcttactagagaagcagccacagaagtatgtaaaaatc
ccccgtggtagcattggtcaggcgtgtcaggagcattcctctcttggaaggcccattccg
accaacaaaggaaagaagagcttgaagatcttggaccagaccaatgtaaccctaagcatt
gatgaaaaggacgtcactgaaattgatgagaagctgtcagaactgctctttgccatcaca
aactgtgaggagcgttactgcctctttaagaacaagccacggctggaacgagcccgggaa
atagactgcgggtccaaggtgcgagtcctgctgcgatcaggggatgacaagctcccgggg
gtcgttcggtataaaggacccttgatgccagagcgtgccctgttggggatttggtttgga
gttgagttattggaagaaggaagaggccacggcttcacagatggatcctatcaaggcaag
cagatctttcgctgtgaggacgagtgtggcgtttttgtcgctttggacaaacttgaactc
tgggaggactatgaggaagatgaggatgaggaagaggaggaagaagaggaagaccaggat
gtggaatctgatcatgctcctctagtagaccccagagacccagaatattttactctggag
ataaattctagagtgttggtgaaacttcaggacgggtctaaagagtatggcacagttatc
tactgtgacatgctgagcctgaatgatggctatgagtactttgtgggtgtagacatggac
catcccattggtgattggaatggctttatcaacggcaagttggtgtgtaattttgccagc
atggaatacactcgtcttgtacccttctgtgatgtgattccagttacagagttttcaatg
caggaccagcacttacagaagcatggctttgcacccaggggaagtggagaaaaaaatatg
tctagtcagaacaaaccaaaaaataaaggattcactccccagtctggaaataggagcaga
tctgaattttattacactttaaatggcacttcggttgatcaccctccacagtccaaatca
aaaagcacgtggtatattgatgaagttggtgaagatccagccaaatccctagtggacacc
tctcctggcttcagcccatcatcccctccatccaaggctccgcctacgcccagcctttcc
agtgagaacaagtttcactccctgcctttcagcctgactaagaaaatgggttcaaatggc
agcattgggcacacacagttatccttatctgtccagtctgtcatgggggatggccatgtt
gctgccggacctgaaactgctgtgatcaccgttccagtgcgaaaccagtttggtcttgag
gtgggatctctagtggaagtaaaggaaaacccccctctttatggagtgattcgctggatt
ggacagcccccaggtctccaggagcctcttgcaggactagaactggatgatgaaagtgca
ggctgcactgatggaacgtttaagggttctcgatatttcacctgtgctcccaaaaaagcc
ctctttgttaaattgagaagctgcaggccagattccagattccccccatcccatcattct
tctaatcaaattgagcgctgcaactcaatcgcctttggtgggtatttgagtgaagtggta
gaacagaacactcctcccaagatggagatggagggcttggaggtgatggtgggaaagaag
aaaggtattcagggtcactacaactcctgctacttggactccactttattctgccttttt
gccttcagttcagtccttgataccgtgttgttgagaccgcgatctaaaagtgatgtggaa
agctaccgggagacgcaagagctgctgcgaacggagattgtaaaccccttgcggatacat
ggatatgtgtgtgccaccaagatcatgaaactccggagaatactagagaaagtggaagct
gcttctggatttacttctgaagagaaggacccagaagaatttctcaatatacttttccat
catattttgcgagtagatcctttgttaaaagttaggtcagcgggtcagaaggttcaagac
tgttacttttatcagatcttcatggataagaatgagaagattggtgttcctactagtcag
cagttacttgagtggtcattcatcaacagtgacttgaagtttgcagaggctccatcctgt
ctcattctgcaaatgcctcgctttggaaaagacttcaagatgttcaacaaaatctttcct
tctttggagctggacattactgatttacttgaagacactcctagggaatgtcggatctgt
gctggcttggctctttacgagtgtagagaatgttatgacgatgtcactatcatgccgggg
aagatcaagcaattttgtgaaaagtgcaacatgcaggtgcatcttcatccacagagaaaa
ggccataagtttggcaagctttccatccccagggagctggtagacagtagctggcgccag
agtcgcttcccccagcagaaaatggaactctttgccgtgctctgtatagaaaccagtcac
tatgtagcatttgtaaaatatggctcaggagattctgcctggctcttctttgacagcatg
gctgatcgggatggtgggcagaatggtttcaacatcccacaggtcactccgtgcccggaa
gtaggggcgtatttaaagatgactcctgaggagctccatgcgctcgatccgaaaagcatc
cagggatttgcacgaaggctactgtgtgatgcgtacatgtgcatgtaccagagtccgtcc
atgagcctgtacaagtga
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