Polypterus senegalus (gray bichir): 120535221
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Entry
120535221 CDS
T08668
Symbol
irx5a
Name
(RefSeq) iroquois-class homeodomain protein IRX-5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120535221 (irx5a)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120535221 (irx5a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
120535221
NCBI-ProteinID:
XP_039618857
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Position
9:36855360..36859393
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AA seq
445 aa
AA seq
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MSYPQGYLYQPSASLALYSCPAAYSTSVISGPRTEELGRSSSGSAFAPYAGSTFTSPSAG
YNSHLQYSADPTAAATFTSYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEEENIDLEKNDDDESHKPIEKADSNDNETGEHKPNSTDITCDRFKEESAGNEI
DPLLTDSELKEPPEERTDIFGPDSPKATTSSPSAVHHGAEILVQEGPVEILHTSGTTGTA
TSVIHSPPAANPKPKLWSLAEIATSSDRSKESSDTSQPTGASGAMTGSAQSPSRSPSHQC
HFPNSAVLSRPLYYTSPFYAGYTNYSTFGPLHGSNTVSSTHFNGLNQTVLNRAEILVKES
KIRSQTQVDLCKESAYELKKGMSNI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggctacttgtaccagccgtccgcttctctggctctctattcatgt
ccggctgcctacagtacgagcgtgatctctggacctcggacagaagagctaggcaggtcc
tcttctgggtcggctttcgctccttatgcgggatctacgtttaccagtccttcagccggt
tataactcccatctccagtacagcgccgacccgacggctgcagccaccttcacttcgtac
gtgagctctccttacgaccacactaccgggatggcaggctctataggatatcacccgtac
gctgcccctttaggttcatacccctacggggaccccgcgtacagaaaaaacgccacgaga
gatgcaactgccaccctaaaggcctggctcaacgagcatagaaagaacccatatcctaca
aaaggggaaaagattatgctggccatcatcactaagatgaccctcacgcaggtgtctaca
tggtttgccaacgcaaggagaagattaaaaaaggagaacaaaatgacatggacacctaga
aaccgaagtgaggacgaggaagaagaggagaacatcgatctggagaagaacgacgacgac
gaatcgcacaaacccatcgagaaggcggattccaacgacaacgagacaggagaacataaa
ccaaactcaacagacatcacctgcgacaggtttaaggaggaaagcgcagggaatgaaatc
gacccccttttgacggactcggaattaaaagaacccccagaggagcggacggacatcttt
ggccctgattccccgaaggccaccacttcttcgccatcggctgtgcatcacggagctgag
atcctggtccaggaaggacctgttgagatactccacacatctggcacaaccggtaccgcc
acctctgtcatccactcacccccagctgctaaccccaaacccaaactttggtctttggct
gaaatcgccacttcatcggacaggtctaaagagagcagtgacacgtctcagcccacgggt
gccagcggggcgatgacgggcagcgcgcaatccccatcgcggtctccatcacaccagtgt
cactttcccaacagtgcggtcctgtcgcgacccctttactacacgtccccgttttacgcg
ggttatacgaactacagcacttttggacctctgcacggatctaacacagtatcctcaaca
catttcaatggattaaatcagactgtacttaatagagcagagattttggtcaaagaaagt
aagatcaggagccagacgcaggtagatctttgtaaagagtccgcttatgaactgaagaaa
ggtatgtcaaacatttaa
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