Polypterus senegalus (gray bichir): 120535222
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Entry
120535222 CDS
T08668
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120535222 (irx6a)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120535222 (irx6a)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120535222
NCBI-ProteinID:
XP_039618858
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Position
9:37492242..37498170
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AA seq
482 aa
AA seq
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MVSKEAAMSFSQFGYPYSSTSQFFVSASPSSSFCDSAPRSVSEVPSGAASGTTAAFCCPP
YENRLLSGGRPELNAALGVYGSTYAAAAAAATHNYANYFSYGAADASALYSSLNPQCDLK
DGSGGLHAGIAQSAAYHPYDPPMGHYHYDRYGSVDLNGTFRRKNATRETTSTLKTWLFEH
RKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKTGDEQKDGTGK
KDPECYEEDIVNKDCKECVEEIEAKLSDLDDIDDDDCDKGVSDAEKIFQDVQILHRGSMA
ETPKPSLPVLSAATSCHRMSCLKGNPGFVSETAETSRGKLSGVVPGTGFVLQQYEIPRIW
SLARTASSSALTGEGRTFKSDCQLQRSRSAMISGGSCVDICSPSSHDSQAMKAFRCNVLS
QKTSQLICPPISESAGTPQLSSESTGFPRQPKSDHGLSETSEKCQMNYKDIKTTAFRPVL
KR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggtatcaaaagaagcggcgatgtctttctcgcagtttggatatccgtacagcagtacc
tcgcagttttttgtatcagcaagccccagttcgtcattctgtgactctgcacccaggtcg
gtgtccgaagtaccctcaggcgcggcatctggcaccaccgcggctttctgctgtccgccc
tacgagaacaggctgctatccggcggccggccggagctcaacgccgccctgggggtctac
ggctctacgtacgccgccgccgcagccgcggccacacacaactatgccaactatttctcg
tatggcgctgcagacgcttcggccctctattcttctttgaacccacagtgtgaccttaaa
gacggatcggggggtctccacgccggaatcgcccagtcagctgcctatcacccatacgac
ccaccaatgggccattatcattacgacaggtacggctccgtggacttgaatggcacattc
agacgtaaaaatgccacccgagagaccaccagcacactcaaaacgtggttatttgagcac
aggaagaacccttacccaacgaaaggggagaagattatgctagctatcatcactaaaatg
actctcacccaggtgtccacctggtttgccaacgccagaaggagattaaaaaaagaaaac
aagatgacttggtcaccaaagaataaaacaggagacgaacagaaggatggaactggaaag
aaagaccccgaatgctacgaagaagacatcgtgaataaagattgtaaagaatgtgttgaa
gaaattgaggcaaagctgagtgatttggatgacattgacgacgacgattgcgacaaaggt
gtcagcgatgctgaaaaaatcttccaggatgtgcagattctccatagaggctcaatggct
gaaactccaaaacccagcctcccagtgctgtcggctgctaccagctgtcaccggatgtct
tgtctgaaaggcaatccgggcttcgtatctgaaacagcagaaacttcaagaggaaagcta
tccggcgtggtgcctgggactggttttgttttgcagcaatacgaaatcccccgaatttgg
tcacttgcacgcacagcatccagtagcgccctcactggcgagggcagaacttttaagtct
gactgccaacttcaaaggtcgaggtcagccatgatttctgggggatcctgcgtagacata
tgtagtccatcaagtcacgactcacaggcgatgaaggcttttcgatgtaacgtcctgagc
cagaaaacttcacagctaatctgtccccctattagtgaatctgcgggtactccacagctc
tcttcagaatccacaggttttccaaggcagccgaaatcagatcacgggttgtcagaaaca
agtgaaaaatgccagatgaattataaagacatcaaaactacagctttcagacccgtcctg
aagagataa
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