Polypterus senegalus (gray bichir): 120535248
Help
Entry
120535248 CDS
T08668
Symbol
fhod1
Name
(RefSeq) LOW QUALITY PROTEIN: FH1/FH2 domain-containing protein 1
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120535248 (fhod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120535248 (fhod1)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
120535248 (fhod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
Motif
Other DBs
NCBI-GeneID:
120535248
NCBI-ProteinID:
XP_039618893
LinkDB
All DBs
Position
9:complement(40503043..40699619)
Genome browser
AA seq
1446 aa
AA seq
DB search
MSMLTCRVQYLDDMDPFVSTNFPEPRRPLVYEFYDNISVAEQVAGVHKLLAAPLKVEDTA
FQLYPNGNYLDMDLTFTEQRDDLEQFFDELNKGKKPILILRTQLSVRVHAILEKLYNSNG
PELRRSLFSLKQLFQDDKDLVPEFVSSEGLACLIKVGAEADQNYQNYILRALSQIMLFVD
GMNGVIHHPETVQWLYTLTGSLSRLVVKTALKLLIVFVEYTESNAQLFIQAVSTVDEQRG
TKPWSCLIEILDEKNGADGELLIFTMTLINKTLAVLPDQDSFYDVTDCLEKQGMEAIIQR
HLRGKGADPDLKHQFTIYENALKHEDEEQDQSLPHTRRDRRKLTPSADDARKHRRASGQN
EPEVALQEKVETGAIYLNSSRKHSERSPTTEKPSLRAERISSPVLSDIIPSPSLSAFDTH
KGVQSTNSNSVTHFTPSLPSSGHSFVSHFVVPVSLARRQESLVAGSTAVAASSVLRDLSP
PVDKPDSPPANPSSEENAKSGEKSIFKLDETDSVWMEEVCPVNMDKPVLRRFENRFLQNL
VATHRGREAIKRAFTKEKQNISCATEEAVSPEIIVSSPKETSRAAPSDEGVDLLSAKELK
NKAINEKEPCSDSSGSSSTSSTLEREEKTSDRQTADNEQAKGLVRQTSLEKHSTLSSEQK
FKLNMLYAKNKPATFTRCSSMAEEEGQEAGKQPPADILLISNNTTLASRICTLENQYQQG
CERQWNPNLDNVSIDVKAVKDRLSEEQQPKTLRTQYSIDSEINTKNLDKTLMTPLSKDVD
FTWDKLETSSRALKIKDLDFSDLLDEEDIDVLDIDGFDGDVSKGSVIPTRATQFVGTTAS
PPPSGVLXSPPPPPPPGVPPPPPPPPPPPPTGVPPPPPPPPGVPPPPPPPPGMPPPPIGY
VTSTLTSPPELPLTKKRKTVKLFWQELKQPEGPRKCKFGHGTLWASLDKVTVDTTRLEHL
FESKAKELATSKKPAEVKKQVIVVLDPKRSNAINIGLTVLPAVHIIKTAINNFDEFAINK
EGIEKILTMIPTDEEKQRIQEAQLANPDVPLGTAEQFLLTLSSISGLTARLQLWAFKLDY
ENMEKEIAEPLFDLKLGMEQLAKNKTFKNILATLLAIGNFLNSSNAKGFELSYLEKVVEV
KDTVHRQSLLHHTCNFVIENYTDSSDVYSEIPAITRSAKVDFDQLSENLVHLERKCKASW
DNLKVIAKHESKPVLKNKMTDFLKDCTERIIILKVVHRRIINRFHSFLLYLGQPSYSVRD
VKVTHFCKIISDFALEYRTTRERVLQQKQKRAAYRERNKTRGKMITETEKFCGATETSVN
ALVHRDTDSEPAKAEENHENMKNVLITTSDSTARRSRGNRSFGRISPPEPVAPQEDGASS
QDDATDEIMDRLVKSVTQNPNQRPSTPKERKRSRANRKSLRRTLKSGLSPDMVQALGLTK
SSEVAL
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgctgacatgccgtgtccaatatctggatgacatggaccctttcgtctccaca
aactttccggagcctcggagacccctcgtgtacgaattctatgataacatttccgtcgca
gagcaggtagctggtgtacacaagttgctggcggcgcctttaaaggtggaagacactgct
ttccagttgtaccctaatggaaactacctggatatggacttaacctttactgaacagcga
gatgacctggagcaattctttgatgaacttaacaaaggaaaaaaacctattctcattctt
cgaacacagctttctgtacgggttcatgcaattctagaaaagctgtataactcaaatggg
cctgaactccgccgctctctattctcccttaaacagttgtttcaggacgataaggatctt
gtcccggagtttgtcagctctgagggtctcgcttgtctcattaaagtgggtgctgaggca
gatcagaactaccagaattacattttgagagcactcagccagataatgctttttgtggat
ggaatgaatggtgttatccatcaccctgaaacagtccagtggttgtatacactaactggc
agtttgtcccgacttgttgtgaaaactgcactcaaacttctaattgtgtttgtggaatac
actgaaagcaatgctcagctcttcatacaggctgtgagcactgtggatgagcagagaggc
acaaaaccatggtcctgcctgattgaaattttggacgagaagaatggagctgatggtgaa
ttgcttattttcacaatgacactgatcaacaagactctggctgtcctcccagaccaggat
tctttctatgatgttacagactgtctggaaaaacaaggtatggaagctatcattcagcga
catctcagaggtaaaggagcagacccggatttgaagcatcagttcactatttatgagaat
gctttaaaacatgaggatgaagagcaagaccagtctttgccacacactcgcagggaccga
cggaaactcactccaagtgcagatgatgcccggaagcacagaagagcctcagggcagaat
gaaccagaggtcgcattgcaggagaaagttgagacgggcgccatttatttaaattcttct
cgcaagcattctgaacggagtccaaccactgagaagccaagtttgagggcagagaggatt
tccagtccagtactaagtgacataatccccagcccttctttgtcagcctttgacactcat
aaaggggtccagtccactaattctaatagtgttacccacttcaccccaagtctcccaagc
agtgggcattcatttgtcagtcattttgtggtacctgtcagtttagccagaagacaagaa
tctttagtagcaggcagtactgcagtggctgctagctctgtactaagggatttatcccct
cctgtggacaaaccagactctcccccagctaatccttcatcagaggagaatgcaaaaagt
ggtgaaaagagtattttcaaactggatgaaacagactcagtttggatggaggaggtttgc
ccggtaaatatggacaaacccgtgttgagaaggtttgaaaatcgatttcttcaaaacctt
gtagccacacatcggggaagggaggctataaagagagcattcactaaagagaagcagaat
atctcttgtgccacagaggaagctgtctcaccagagattattgtctcatcacctaaggaa
accagcagagcagctccttctgatgaaggtgttgatctactgagtgccaaggagctcaaa
aataaggctataaatgaaaaggagccctgttctgactccagtggatcatcttcaaccagt
agcacactagagagagaagagaagaccagcgacagacaaacggcagataatgaacaagct
aaaggacttgtacggcagaccagtctggaaaagcacagtaccctttcaagtgaacagaag
tttaagttgaacatgttgtatgccaaaaacaagccagctacctttacacgatgcagcagc
atggctgaggaggagggacaagaagcagggaagcagcctccagcagatattctactgata
tctaacaatactactttggcaagccgcatctgtactctggaaaaccagtaccagcaaggg
tgtgaaagacagtggaaccccaaccttgacaatgtcagtatcgatgttaaagcagtaaag
gacaggctgagcgaggagcagcaacccaaaaccctgagaacacaatatagtattgactca
gaaataaataccaaaaacttggacaaaacactcatgactcctttatcaaaggatgttgac
tttacatgggataaactggaaaccagttctagggcactaaagattaaggatttagatttc
tcagacctcttggatgaggaagatattgatgtcttagacattgatggttttgatggcgac
gtttcaaaaggcagcgtgattcccacacgagcaacccagtttgttggaactactgcttca
cctccaccatctggtgtacttntctcccctccacctccacctccacccggagtgcctcct
cctccaccgcctccacccccacctcctccaaccggtgtgcctcctcctccaccacctcca
cctggtgtgccgcctcctcctccacctccacccggtatgcctcctccacccattggttat
gttacttctacactgacatcccctcctgaactgccccttacaaaaaaaaggaagactgtg
aaactgttttggcaagagttgaaacagccagaaggaccaaggaaatgcaaatttggacat
ggcacattgtgggcatccttagataaggttactgtggacacaacccgacttgaacatttg
tttgagtctaaagctaaggagcttgctacttctaagaaaccagctgaagtcaagaaacag
gtaattgttgtcctggatccaaaaaggagcaatgcaatcaacatcggtttgacagtgttg
ccagcagtgcacataataaagacagcaattaacaactttgatgagtttgcaattaataag
gaggggattgagaaaattttaaccatgatacctacagatgaagaaaagcaaaggattcag
gaggctcagctagctaacccagatgttcctcttggaacagcagagcaattccttttgacc
ttgagttcaatcagtggcctcactgctcgactgcagctttgggcttttaaactggactat
gaaaacatggagaaggagattgcagagccattgtttgacttgaagttgggaatggagcaa
cttgcaaaaaataaaaccttcaagaacattctagccacacttttggcaattggaaacttc
ctcaacagcagcaatgcaaagggctttgagctgagctacttggagaaagttgtagaagtt
aaagacactgtccatcggcaatcactcttgcaccatacctgcaattttgtgattgaaaac
tatacagactcttcagatgtgtattctgagattccagctattacacgatcagcaaaggtt
gattttgatcagctctcagaaaatttggttcacctggaacggaaatgcaaggcctcttgg
gataatttgaaagtgattgccaaacatgaatccaaacctgttcttaagaacaaaatgaca
gactttctgaaggactgcacagagcgtattataatcttgaaggtggtgcatcggaggatt
ataaaccggtttcactctttcctgctgtaccttggtcagccatcctactctgtgagagat
gtgaaggtaacacatttctgcaagatcataagtgactttgcattagagtaccgtaccacc
agggagagggtgttgcaacagaagcagaagcgagcagcttaccgagaacgaaacaagaca
cggggaaagatgatcacagagacagaaaagttctgtggcgctactgagacatccgtgaac
gccctggttcatcgagacactgacagtgagccagccaaagctgaagaaaaccatgagaac
atgaagaatgtcctgatcaccacatcagactctacagctcgccggagtagaggaaacaga
agttttggcagaattagtccacctgaacctgtagctccacaggaagatggtgcaagttcc
caagatgatgcaacagatgagatcatggaccgtttagtaaagtctgtcacacagaatccc
aatcagcgaccatccactccaaaggagagaaagagatctcgagcaaaccgcaagtccttg
agaaggactttgaaaagtggactaagtcctgacatggtgcaggcactgggactgacaaag
tccagtgaagtggcattgtaa
DBGET
integrated database retrieval system
