Polypterus senegalus (gray bichir): 120535280
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Entry
120535280 CDS
T08668
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120535280 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120535280 (nudt21)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
120535280 (nudt21)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
120535280
NCBI-ProteinID:
XP_039618948
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All DBs
Position
9:complement(42915641..42932231)
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AA seq
227 aa
AA seq
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MSVVPPNRSQTGWPRGVNQFGNKYLQQIKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgtgcctcctaatcgctcccaaactggctggccccgtggagtaaatcagttc
gggaacaaatacttgcagcagatcaagccactaaccctggagaggaccatcaacctgtat
ccactaacaaattacacatttggaacaaaagaacccctttatgaaaaagacagttcagtt
gctgcacggtttcagcgaatgagagaagagtttgacaagattgggatgagaagaaccgtg
gaaggagttctgattgttcatgagcacaggcttccccatgttcttttgttacaacttggt
accacattttttaaactacctggtggagaattaaacccaggagaagacgaagttgaaggg
ctaaaacgtcttatgacagagattcttggacgtcaagatggtgtactacaggattgggtt
attgatgactgtataggaaactggtggagaccaaattttgaaccaccacagtatccatat
attcctgctcacattactaaacctaaggaacacaagaagcttttccttgtgcaattacaa
gaaaaagctctctttgctgttccaaaaaattataagttggttgcggcgccattatttgag
ttgtatgacaatgctccaggttatggacccataatctccagtttaccgcagttacttagc
aggttcaattttatttataactga
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