Polypterus senegalus (gray bichir): 120535307
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Entry
120535307 CDS
T08668
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psex04990
]
120535307 (sned1)
Domain-containing proteins not elsewhere classified [BR:
psex04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120535307 (sned1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_Teneurin
EGF_CA
MAGP
cEGF
FXa_inhibition
GmrSD_N
Motif
Other DBs
NCBI-GeneID:
120535307
NCBI-ProteinID:
XP_039618997
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All DBs
Position
1:172159698..172348377
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AA seq
1361 aa
AA seq
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MRLGVTLLWLWTAFSPLEGAVPLEDFYPFGIEHGDSRTVKQDDGGSGLLEISVNFPFFGD
RHSGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGEVFYRESKDPT
ILQRTADDIHQYFPEFPMFTATWALIATWYRVTFFGGSSFSPVNTFQAVLVTNGNVSFTI
FQYEHITWTTGMHTSSGGDFAGLGGTAAQAGFNAGDGTRYFNIPGSRTEDIVDVEETTNV
GVPGRWVFRIDDAHVQMGGCNDSASVCQNLRPCMNGGHCIDDCITGNPSYTCSCPSGYTG
KKCQLDIKECENSPCMNGGTCIEGVGNFTCLCEPGYTGLMCETDVNECECNPCKNGGTCV
EGAGNFSCLCNPGYNGLTCETDVDECESSPCVNEGTCINGVNHFTCLCKLGYTGLTCETE
EKDSCSQKQCQNEGSCLEVNGTMTCVCNLGFTGEYCEEEKCPCQNGGFCIDGNSTCDCPS
GFTGDICELEVTQTACSLSIPCPGGGPCMEYGGSYLCTCQTGMIEAEIQPSACDSAPCLN
GGVCLERDSGYICECKLGYRGKNCEQVKLSVCASNPCRNGGSCRGDGDGYHCLCPYRFHG
KHCEIGKPDPCSSSPCINGGTCFHYIGKYKCECTADFTGRHCENALDACLSNPCKHGGNC
TADTDGAYQCHCKFGFRGTHCETEISCGSPSRVKNSQVQYSSTHPGSSAIYVCHSGYSLI
PESTISVCGIHGSWSQPPICEEINECLSEPCLNGGTCKDRVAAYICACENGFTGPNCETE
LDECLSEPCKHGGICLDQPGAYFCQCPEGFVGQDCEAEEDTCLLQPCGSRGYCRSESRGR
YSCTCKVGHTGKDCEKELFAPAALQVKKLEEDEVEVSWKSANASQKLIDGFAVTYTPVGG
GARKTDFLDKHRTTHLLRSLLPGRLYNVSVYSVKRNTNNNDISQSVVTLVRTRPHKVEEF
LVTNVSTSRVWMKWVLRQSKHSIVDGFRISLKSAKSMEEISVLLNASIKEHNIGSLVPGQ
MYTMDIVTQSGLKPEQLPTVSQSAGPIRLWTKPLPPQNFSMAFITMTTAQVTWNQPHTGF
LDGYVVNITSGHTTKSRYLPNRRMTSYTVRDLSPMQQYRLALTAVINTDHEQLHSAPMYL
NFTTMQSDESTRRREATETRRESQTIKHRAPSTQPLPAIQLQPVVTANRENSEEVPRYTE
LIDGRQRITAKFGNIQNKAIVHRPRPEPPIKLDMVEETTNKVGLALQAPEEEKQTNTEEQ
SDCKTNPCRNGGTCVKEPDSYSCDCSVGYKGKHCELFCQRVPHPCTRLYSETKTIQVWKR
NVCHYQYKRTYKVHQDVCYREICEPVITKKSPWDRRTNKHK
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgggggtgactctgctctggctctggacagcattctccccactcgagggggca
gtgcccctggaggacttctatccttttggcattgagcatggtgacagtaggacagtaaaa
caagatgatggtggctcaggtctattggagatatcggtgaatttccccttcttcggggac
aggcactctgggttatatgtgaacaacaatggccttgtgtcatttcttcgagaagtgtct
cagtttacacctgtggcattcccaatcgcaggagacagacgagtggtggcacctttctgg
gcagatgtggataaccgtcgtgcaggggaggtgttttaccgcgagagtaaggaccctacc
atccttcagaggacggctgatgacatccaccaatacttccctgaattcccaatgttcact
gctacctgggcactgatcgcgacctggtaccgagttacattctttggaggtagctccttc
tctccggtgaacactttccaagcagttcttgtcaccaatggcaatgtctctttcaccatc
ttccagtatgagcacatcacctggaccacaggcatgcatacgagcagtggaggtgacttt
gctggactaggagggacagcagcccaggcaggtttcaacgcaggagacgggactcgctat
tttaacattcctggctcacgtacagaagatatagtggatgtggaagagacaactaatgtg
ggagtgccaggacgctgggtgtttcgtattgatgatgcccatgtgcaaatggggggctgc
aatgattcagcatctgtttgtcaaaatcttcggccctgtatgaatggaggccactgtatt
gatgactgtatcaccggtaacccctcatacacatgctcctgtccttctggctacactggc
aaaaagtgccagttagatattaaagaatgtgaaaacagtccttgcatgaacggtggaact
tgtatagaaggagttggcaatttcacctgcttatgtgagcctggctatactggactgatg
tgtgaaacagatgtgaatgaatgtgaatgcaatccttgtaaaaatggagggacatgtgtt
gaaggagctggaaatttctcttgcttgtgcaaccctggttataatggccttacctgtgag
acagatgttgatgaatgtgaaagcagtccctgtgtaaatgagggaacttgtattaatgga
gtgaaccatttcacttgtttgtgcaaacttggctacacagggcttacctgcgaaacagaa
gagaaggattcctgttcacaaaagcaatgccaaaatgaaggatcttgcttagaagttaat
ggtacaatgacctgtgtctgcaacctaggattcaccggggaatactgcgaggaagagaaa
tgtccttgccaaaatggaggcttctgtatagatggcaattctacctgcgactgtccttct
ggattcacgggcgacatttgtgagcttgaagtgactcagacagcttgcagcctcagcata
ccttgcccaggtggcgggccgtgtatggaatatgggggctcctacctgtgtacttgtcag
acgggaatgattgaggcagaaatacagccttctgcttgcgattcagctccctgcttaaat
ggtggtgtctgtttagagcgagacagtggatacatttgtgaatgcaagttgggctacaga
ggaaaaaattgtgaacaagtcaaactcagtgtttgtgcatccaatccatgtcgcaacgga
ggttcatgccggggggacggagatggataccactgtctctgtccttataggttccatgga
aaacactgcgaaattggaaaaccagacccttgttcatcaagcccttgcattaatggcgga
acttgcttccattacattggaaagtacaaatgtgaatgtactgcggatttcactggaagg
cattgtgagaatgctctagatgcttgcctttcaaacccctgtaaacatggaggcaactgc
acagcagatacagacggggcttaccaatgtcactgtaagtttggattccgagggacacac
tgtgagacagagatcagctgtggttccccatctcgtgtgaagaactcgcaggttcagtac
agctccactcatcctggatcaagtgccatctatgtctgccactctggttactcactcatc
ccagaatccacaataagcgtgtgcggtattcacggttcctggagtcagcctcctatttgt
gaagaaatcaatgagtgcctctcagagccctgcttgaatggtggaacctgcaaagatcgt
gttgctgcctatatctgcgcttgtgagaatggctttactggaccaaactgtgaaacagag
ttggatgagtgcctctccgagccttgtaaacacggtggaatctgcctggatcagcccggt
gcttacttctgtcagtgtcctgaaggctttgtgggccaagactgcgaagcagaggaagat
acctgtctactgcagccctgtggaagccgaggttattgccggagtgaaagcaggggaagg
tattcctgtacatgtaaagtgggacatactgggaaagactgtgagaaggagttgtttgcc
ccagcagctctgcaagtgaagaaacttgaggaggatgaggtggaagtcagctggaaatca
gcaaacgcctcccagaagctgattgatggctttgctgtcacttacacaccggttgggggt
ggagcaagaaagacagacttccttgacaagcaccgtactactcacctgctgcgctcactg
ttgcctggccgactttacaatgtttctgtctattcagtgaagcgcaataccaacaacaat
gacatcagccagtctgttgtcactctggtgcgcacaaggccacacaaagtggaagagttc
ctggtcaccaacgtatccacgtcccgtgtttggatgaagtgggttcttcgtcagagcaag
cattcaatagttgatggttttcgaatctcattgaaatctgctaaaagcatggaagaaata
tctgttttattgaatgccagcatcaaggagcacaacattggatctcttgttccagggcag
atgtacaccatggatatcgtgactcagagtggtctcaaacctgaacagcttccaacagtt
agccagtcggctggaccaatccgtctctggactaagcctctacctcctcaaaatttttca
atggctttcattacaatgacaacggcccaggtgacctggaaccagccacacactggtttt
cttgatggctacgtggtcaacatcacttctgggcacaccaccaaaagtcggtatttgccc
aatagacggatgacctcttacacagttcgagatctttcacccatgcagcagtatcgctta
gcccttacagccgtgatcaatacagaccatgagcagctccacagtgctccgatgtacctc
aacttcactactatgcaatctgatgaaagcacaagaagaagagaagctacagaaacacga
agggagtcccagacaataaaacacagagcacctagcactcaaccccttccagcaatccag
ctgcaacctgtggtcacagccaacagggaaaattcagaagaggtccccaggtatacagag
ctgatagatggacgacaacggataactgcgaaatttggaaatatacagaataaggctata
gtacaccgtcccagacctgagccaccaatcaagttagatatggttgaagaaactaccaac
aaggttggcctggcccttcaggctccagaagaagaaaagcaaacaaatacagaggagcag
agtgactgtaaaacaaacccctgtagaaatggaggaacatgtgttaaagagcctgactcc
tactcctgtgactgcagtgttggatataaggggaaacactgtgaactcttttgccagaga
gttcctcacccctgcacccggctctattcagaaacaaagactattcaggtttggaagcgc
aatgtctgccattaccagtataagcgtacatataaagtccatcaagatgtgtgctacagg
gagatctgtgaacctgtcattacaaagaagtctccatgggacagacggactaacaagcac
aaataa
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