Polypterus senegalus (gray bichir): 120535375
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Entry
120535375 CDS
T08668
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120535375
04121 Ubiquitin system [BR:
psex04121
]
120535375
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120535375
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120535375
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like_helical
ZBED1_RNase-like
DUF659
DBD_Tnp_Hermes
FAM200-ZBED5_RNase-like
Motif
Other DBs
NCBI-GeneID:
120535375
NCBI-ProteinID:
XP_039619101
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All DBs
Position
9:23541197..23543048
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AA seq
578 aa
AA seq
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MRSHLLNHHPEKLREDMRSKIQSGQKTIKEAFTASLPNNSARAQEITRCIGEYIAKDLRP
FSVVDNEGFKKLVNMLEPKYKIPSRPQFSQTILPALYKETRAKVAQSLKQAECISITTDG
WTSRATQSYVTITAHAMTSEWEIKTFVLQTRVLFESHTGHNIGEVLKFAVSEWELDMIYN
NHQGIAVVTDNARDMGVAVKEAGLSPHVKCFAHTFNLASQAGLKVNRVSRLLGRVRRVAA
FFHRSSTATAVLTSKQQMLNLPVHKLIMDVVTRWNSSLDMIERYLEQQQAIASALLSSEV
RSNACKIDTLDTADIVDAEDIVKLLTPLKKATTVLCDESRPTISLIMPLKHMIQVSMAPC
DVNSNTISQMKAAILNDLADRYQGEQAEFLYEISVLDPRFRALPHLNNSERDEIFNRLKL
KATHMQNQNPSEEESAAPGSHEHVAGHSKTDLPQKAHAVGGVSPPSKKTALEDLLGDSFS
QGDSRTQHTAQIDADLDLYRKETSISLMACPLEWWKDNAQRYPLLSTLAKSYLSVPATSV
PSERVFSVAGDIVNAQRSQLLPDNVDMLIFLKRKPVSV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaggagccatttgttaaatcatcaccccgaaaagttacgtgaagatatgaggagcaaa
atccagtcgggccaaaagactataaaagaagcgtttacagcctcactccccaacaacagt
gcgagagcacaagaaatcacaagatgcattggtgaatatatagccaaagacctacggccc
ttttcggtggtggataatgaaggttttaagaagttagtaaacatgctggagccaaagtat
aaaatcccgtcgcggccacaatttagtcaaactattttaccagctctttacaaagagaca
agggcgaaagttgcacagagcctcaagcaagcagagtgcatctcaatcaccacagatggg
tggacttcacgagctactcagagctatgttaccatcacagcacatgctatgacaagtgaa
tgggagataaaaacttttgtcctacagacacgggtactctttgagtcacacactggacac
aacataggcgaggtgttaaaatttgctgtttcagagtgggagcttgacatgatttacaac
aatcaccagggcatcgctgtggttactgacaatgcaagagacatgggtgtagcggtaaaa
gaggctggtctgtccccacatgtaaagtgttttgctcacaccttcaaccttgcgtcccag
gcaggtttgaaggtaaaccgtgtcagtcgtctgcttggcagagtgagacgtgtggcagcg
ttttttcaccgcagttcaactgcaacagctgtgctgacctccaagcagcaaatgttaaac
ctgccagtacataaactgataatggatgtagtaactaggtggaacagctcacttgacatg
attgagcgctacctggagcaacaacaggcaattgcttcagccctactgagttctgaagtc
aggagcaatgcatgtaaaatagacactctagacacagctgacatcgtagatgctgaggac
atcgttaaacttctcacacccttgaaaaaagcaaccactgtgctgtgcgacgaatctcga
ccaacaatctctcttatcatgcctctcaaacacatgattcaagtgagcatggcaccgtgc
gatgtaaactcaaacaccatctctcaaatgaaggcagcaatactgaatgatttggcagac
cgttaccaaggggagcaagcagagtttctgtatgagatcagtgtgttggacccccggttc
cgggcactcccccatctgaataacagcgaaagggatgaaattttcaacaggctcaagtta
aaagcaacacacatgcagaaccagaaccctagtgaagaggaaagtgcagcaccaggcagc
catgaacatgtagctggacactcaaaaactgacctgccacaaaaagcacatgctgtggga
ggtgtctctcctccatccaaaaagactgctcttgaagatctccttggggattcttttagt
caaggggacagcagaacacagcacactgctcagattgatgcagaccttgacttgtaccgc
aaagagacctctatctcactcatggcttgtcctctcgagtggtggaaagacaatgcacaa
cgttacccactgctgtcaaccttggccaagtcatatctctctgtcccagcaacctcagtc
ccaagtgagagggttttttctgttgcaggggacattgtaaatgcccagagatcacagctt
ttaccagataatgttgatatgctaattttccttaaaagaaaacctgtctctgtctga
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