Polypterus senegalus (gray bichir): 120535653
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Entry
120535653 CDS
T08668
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120535653 (rfwd3)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120535653 (rfwd3)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120535653 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
zf-RING_UBOX
EIF3I
WDR55
zf-rbx1
zf-RING_5
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Myo5a
zf-RING_Vps41
WD40_2
zf-RING_11
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
zf-C3HC4_4
WD40_Prp19
Beta-prop_RIG_2nd
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120535653
NCBI-ProteinID:
XP_039619542
LinkDB
All DBs
Position
9:116868766..116999801
Genome browser
AA seq
716 aa
AA seq
DB search
MMDVMDLDLQVRDMEALRNSNNTIPALQNNNSDPITVTMEEEENLRHHSLQSIVEHGLHN
NLSENTGTNRLLLRPSQTTRTFSRSRRLLTQRRTRQNSSLESFFLPVQSQAVELPSSGSL
LHIMVNTATVSVTDPGSGNTTEHSDSDMSMIDAEEAVEQAHETAPMVQQSADGALPAESN
FHSEAVDREEEAIMPQVVEAKSPSKKLPEPSTIASSTNDLEEEEGDTCTICFEPWTNAGD
HRLSALRCGHLFGFNCIDRWLRGQGGKCPQCNKKAKRSDVVLLYARSLKALDTSDQEKMK
STLQHEQTLRRKAELESAQCRLQLQVLTDECGRLRKELQELKTLMSQQGGSTSHSSGSVP
GCSLSHSSSQAQGRRYNFSKAVLVSQTGNCRVLAYCEPLSCLLASQPSPQATLIPGCGVK
KISAVNMKSCQYVPIHTKQIRGLSFNNQMDSLMLSAALDNTIKLTSLLTNTVVQTYNTGR
PVWSCCWCLDDPNYVYAGLSNGAILVYDTRDTSTYVHELTSLGSRCPVVSLSYLPRAASA
AFPYGGLIAGTLEGGCFWEMKGGISYRPHHLPLEPGGCTDIQVDASSRHCLVTYRPGKSS
PNLRCVLMELNRVVQQDSLDDPACTCYPIQTFNAGSCCKLLTKNALFESPAKDGSMLVCA
GDEASNSAMVWDAGSGTLLQKLQADQPVLDICPMEINQTHFLAALTEKMVKVYKWE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgtgatggatttggacctacaggtgagagacatggaagctctgagaaattct
aataacacaattccagcgctgcaaaataataattctgatccaataactgttacaatggag
gaagaggagaacctacgtcatcattctcttcagtctattgtggaacatggcctgcataac
aatttgtcagaaaatacaggaacaaataggcttcttttgcgacccagccaaaccacgcgt
actttcagtaggtcaagaaggctgctgacacagagaagaacaagacaaaattccagcctg
gagagctttttccttccagttcagagtcaggcagtagagcttccatcttctggctccctt
ttacacataatggtgaatacagcaactgttagtgttactgaccctggatctggcaataca
acagagcacagtgactccgatatgagcatgattgatgcagaagaggctgtagagcaagca
catgaaactgctcccatggttcaacaaagtgcagatggtgctttgccagcagaaagtaac
tttcactcagaagccgtggatagggaagaggaggcaataatgccacaggttgtggaggca
aagtctccttcaaaaaaattacctgaaccaagcactattgcatcttctactaatgatctt
gaagaggaagagggagacacctgtacgatatgttttgaaccatggacaaatgcaggtgac
caccggctctcagctctacgttgtggacatctttttggcttcaattgcattgaccgttgg
cttcggggtcaaggtggaaagtgtccacagtgcaataagaaggcaaaacgttcagatgtt
gtgcttttgtatgctcgttccctgaaggcccttgacaccagtgatcaggaaaaaatgaaa
agtactcttcagcatgagcagaccctacggagaaaggcagagttagaatctgcacagtgc
cgtttacagctccaagtcttaacggatgaatgtggaagattgcgcaaggagttacaggaa
ttaaagacattgatgtcgcaacaaggaggcagcacttcccattcatcaggatctgttcct
ggctgtagcctctcacatagttctagccaagcccaaggaagacgttataacttttctaaa
gctgtgttagtgtctcagactggtaactgtcgggttttggcctactgtgaacccttgagc
tgtcttttggcatctcagccgtccccacaagcaacacttataccaggatgcggtgttaag
aagataagtgctgtcaatatgaagtcttgccagtatgtgcctatccacacaaagcagatt
cgtggtttatctttcaataatcaaatggacagcttaatgctctctgcagcattggacaac
actatcaagttgaccagtcttctcaccaatacagtggtgcagacctataacactggacgt
ccagtttggagctgctgctggtgccttgatgatcccaattatgtctatgctggtctgagt
aatggtgccatcttggtatatgacactcgagacaccagtacatatgtccatgagttgaca
tcccttgggtccagatgtcctgtggtttccctgtcttatttaccccgtgctgcgtctgct
gcattcccttatggtggtctaatagctggcaccctggaagggggatgcttctgggaaatg
aaaggtggaatatcttacagaccacaccatcttcctttggagccgggtggctgcacagac
atacaggttgatgcaagtagtcggcactgccttgtgacttacaggccaggtaagtcaagt
cccaacttacgatgtgtgttaatggagcttaaccgagtagtacagcaagattcccttgat
gaccctgcgtgtacatgctaccccattcaaacattcaatgctggctcttgttgtaagctg
ctgaccaagaatgccctctttgaaagccccgcgaaagatggcagtatgttggtgtgtgca
ggagatgaagcatcaaactcggcaatggtgtgggatgctggcagtggaactttgcttcaa
aagctgcaagctgatcaacccgtattggatatttgcccaatggaaataaatcagactcat
tttttagctgctttaactgagaaaatggtgaaggtgtacaaatgggagtga
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integrated database retrieval system
