Polypterus senegalus (gray bichir): 120535744
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Entry
120535744 CDS
T08668
Symbol
clstn3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120535744 (clstn3)
Cell adhesion molecules [BR:
psex04515
]
Cadherins
Cadherin related
120535744 (clstn3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
120535744
NCBI-ProteinID:
XP_039619709
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Position
9:126402340..126442607
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AA seq
965 aa
AA seq
DB search
MGAPRQRTALALWGALVLLSGSPGAANKANKHKPWIETEYQGIVMENDNTVLLNPPLFAL
DKDAPLHYAGEICGFRIHGGPNSGGSVPFEAVVLDKSTGEGLIRAKEPLDCESQREHTFT
IQAYDCGEGPDGSNTKKSHKATVHVRVNDVNEFAPVFVERVYQVSVSEGRLYDRILRVEA
IDADCSPQFSQICFYEILTPNIPFSIDNDGNIKNTEVLDFRRQRYYHFSVTAYDCGKKRA
AQDTEVQIEVKPTCKPGWIGWVKRIEYTPGSGSVPLFPNMHLETCEEPVWNIQATVELQT
NHIGKGCDRDGYSDRSVRRLCGAVRGEVDLLPPPSLSSNWTAGLPTLPSPDSSLVYSFNG
STHVAVVPQAALRDLTLAAGDHFTLQLWMKHRPAGPAQSRSRKDEETVMCSTARNDDSFS
HYSLSVHGCRLSLLYWPQLDNARPVKFLWKLEQVCDDDWHHYALNLEFPTVTLYVDGVTF
DPALIHDNGPLHAPSPVPRLVIGACWTEETEQGKVNSTEAKREEPLHFQSHFRGLLAGFT
LRPGRVEPHSVIECLYACREGLDFGDLESLGSGMKVHVNPSQSLLILEGDDIENFNRAIQ
QVTYRNSLRFATAGVRPLKISTSLRCFSEEGCISIRDVEGYLVVLQPDAPQITLTGMGHF
ARPATEFESPQGVPLFPELHITCSVSHAINRASQGMEGGALMSDAIAHTLDGCEVSPVGE
ELDLRREELLLDHEIVKEKGLELVNTTAYLAVSGPESISVYEDILRSVHYRLSQGVALYE
RKFRLSCTEMNGRYASNEFTVEVNFLHSVDGQSHPSHLLSSQQFMHPSRHLPAELAGHNV
PLEHRNSVIPGAATIIIVVCVGFLALMVVLGIFRIRSIHRRGTKERAGSKDGEIDWDDSA
LTIIVNPMESYESRHGVSVDGSREDLEEEDGEEDEETPESPPGDACDDQHIILKTDPRGH
APRRY
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaccgaggcagcggacagctctagcactgtggggggcgctggtgttgctgtcc
gggagcccgggagccgccaacaaagccaataaacataaaccatggattgaaacagaatac
caaggaatcgtgatggaaaatgacaacacggtgttacttaaccccccactctttgccctg
gataaagatgcacccctgcattatgcaggagaaatttgtgggtttcgaatccatggtggt
ccaaactctggaggatcagtgccatttgaagctgttgtcctagataagtccactggggag
ggccttattcgagcaaaagagccattggactgtgaatcacagcgggagcacacttttacc
atccaggcatatgactgtggagaaggccctgatggaagcaacacaaaaaaatcacacaaa
gccacagttcatgtgcgagtcaatgatgtaaatgaatttgcacccgtctttgttgagaga
gtctaccaggtgtcagtgagcgaggggcgtctctatgaccgcatactgcgtgtggaggca
attgatgctgactgctcaccacagttcagtcagatatgtttctatgaaatcttaacacct
aatattccattttccattgataatgatggaaacatcaagaacacagaggtccttgacttc
cgcaggcagcggtactatcacttctcagtgacggcttatgactgtgggaaaaaaagagct
gcccaagacacagaagtccagatcgaagtcaaacccacctgcaagccaggctggataggc
tgggttaagcgcattgagtacactccaggctcaggcagtgtaccactctttccaaatatg
cacctggagacatgtgaggaaccagtgtggaatatccaggccacggtggaactgcaaaca
aatcatattgggaagggctgtgacagagatggctattcggatcgctcagtccgacgtctc
tgtggagctgtccgtggtgaggtggacctacttccacctccttcactttcatccaattgg
actgctggactcccaacacttccttcaccagattcctcattagtctactcgttcaatggt
tccactcatgtagcagtggtgccccaggctgctctgcgtgatcttacactggcagcagga
gatcactttactctgcagctatggatgaaacataggcctgcaggaccagcacaaagtagg
agcagaaaggatgaagaaactgtgatgtgcagcacggcccgtaatgatgactcattttcc
cactactccttgtctgtccatggctgccgactgtctctgctctattggccacagttggac
aacgccagacccgtcaaatttctatggaaattagaacaggtatgtgatgatgattggcat
cattatgctctgaatcttgagttcccaaccgtcactctgtatgttgatggtgtgaccttt
gatcctgctctgatccacgataatggaccattgcacgcaccttctccagtgccacgactg
gtaattggtgcatgctggacagaagaaacagagcaagggaaagtaaacagcactgaggca
aaaagagaggagcctctgcatttccagtcccacttccgaggactcttagcaggattcaca
ttaaggccaggtcgagttgagccccacagtgtgattgaatgtctctatgcctgtcgagag
gggcttgactttggggacctggaatcattaggctccgggatgaaggttcatgttaatcca
tcacagtctctccttatattggaaggagatgacattgaaaattttaaccgagctattcaa
caggttacttatcgcaactcactgagatttgctacagcaggggtacgcccccttaaaatt
tccacatcattacgctgctttagtgaagaaggatgtatttcaatcagagatgttgaaggg
tacttagtagtcttgcagcctgacgctcctcagatcaccctgactggcatgggtcacttt
gctcgccctgctactgaatttgagagcccccaaggtgtcccactttttccagaattacac
atcacctgctctgtatctcatgctatcaaccgagcaagccaaggcatggaaggtggagcc
cttatgtctgatgctattgctcacaccttggatggctgcgaagtgtcaccagtgggtgaa
gagctcgatctgcgaagagaggaacttctgctcgatcatgaaattgtgaaggagaagggc
ctggaacttgtcaacacaactgcatacttggctgtgtcaggccctgaatctatttctgtg
tacgaagacatcttacgttctgtgcattataggttgtctcaaggtgtagcattgtatgaa
agaaaatttcgtctatcctgcactgagatgaatggacgatatgcaagtaatgagtttaca
gtggaggtaaatttcctgcatagtgttgatggacaatcacacccaagccacctgctttca
tctcagcagtttatgcacccatcacgccatttgcctgcagagttagctggacataatgtt
cccttggagcaccggaattctgtgattcctggcgcagcaactatcatcattgttgtctgt
gtgggttttcttgctcttatggttgtgcttggcattttccgaattcgttctatccaccgt
cgtggaacaaaggagcgagctggatctaaggatggagaaattgactgggacgattcagct
ctgactattatagttaaccctatggagtcttatgagtcccgccatggtgtctcagttgat
ggtagcagggaagatttagaggaggaagatggtgaggaagatgaagagacaccagaatct
cctccaggtgatgcctgtgatgatcagcacatcattctcaagactgatcctagaggccat
gcccctcgacgttactga
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