Polypterus senegalus (gray bichir): 120535789
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Entry
120535789 CDS
T08668
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120535789 (sec16a)
Membrane trafficking [BR:
psex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120535789 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
120535789
NCBI-ProteinID:
XP_039619791
LinkDB
All DBs
Position
9:130788274..131007731
Genome browser
AA seq
2444 aa
AA seq
DB search
MQSPPQTAPAGATGPPPSGGIPNIFRRSSPYNRRANVPVSGSSAPVPPITDPFAFGRQTP
QNAVGNPLPKSNPLTVQSQVLTEPPQTVPVQHQMTLDNKQGILPASGLGGVNVFTVSNMV
TPVSAIGHNSNLLPMPVSSSLDSGQCNSVANTSINALQIHDVSSEVSSREIASLQNRPSY
GHHTRGDLGGDLGSYNSIVPSAVPPNSQPSVINWMQDNRPPSVHNYLQPSELHCQNPSVS
SITSSLAGVHSQKPIHTEHKSPILQHNASSLQISGGNEKHEISEKAEDNKHLAFQHSKQT
FNSDNYFSQNIPEPWISQSVKDQFYYKEGRAEGTQSNSVNRMPDYSAQTGFHVQANHITY
ETDKGTVGMFFKGDEIENEETLSSESHASNGVPVPELYVQNLGMFSGHVSGQLSAPQVGN
EVAHSTHHSLDSSVSGNGNLPLSNEGNTYLDNSSFTNVSQKVTGIHFDNVENLECVPNIE
VLPSKPLNAPGIHQSPVENMGIDLGPCTGKPVSGIADSFEAGPNLETPDSVPHTVRSESV
SSGYSNVSHSSNSNCRRPQGVVGTFIQQEVAKPTEEVSPNYFEQIDTSPSAEFIEENGPN
GVYHKELSQPSTPSPPKPTGTFRASANSSFEPVRSRGVGVKPAEIDKARLVMEKSQDTFV
SDASPGNLEHPPDNLETLFMPHPLSSTANTKIGLENVQMVPDKRPSNRANATRLKCQSPA
TTLWAQNEMPVLGANILLVPAAPAVHHSLVKQPSTEVIQPPEDGPLEHQLEQQVQAQDSL
SFKPRTTLENLENPPTIGTDEYLKQHPNVSYASLLIPSPPADSFNNQTHLIAQPTQNYTL
APSNNCPVSVPNQSNKNLFDSLNRSANELILPGASVAPIANSGQTGLSINSSLPNKQWPQ
FSVTSNQPGITSSQPANLSVQTLPGQAPLNLAQDSRSNEKRSPESASFDPSTSLSNSSSD
PSLLQVQNVNPSFSESNTQTQTIVTHQVSSNYELLDFTMHAVNQSRSSSQSSQLPATGSH
PSTSASVGMKQESQAINASDFYLQVTKDAKLSTVSGIEQNGQPKLLPSLPSQQNTVNSSQ
PTTNIYHQSPPPAVFHGNDAQDGKSVTSNKNYPPVHLVPKESLESEASDPQSRYENAAPK
VPLNPMYVPPGADLQTQSFNSSLQFPQVSRPGPSHTPQQMYGPPPQQQISGYGYYGGGAY
PDYSGGRQGPYPSPYPLDPRTAQAYYKEEQYRRYDRIGQYESYNPTRETERHPYPEQPER
PCSRGSQYSDRPPSRRQGHSEDYYQRGAPSAFDYYYGDPSLWDPRYDPAAYDPRYHEYYD
PRYWYYDLEAYRRRDPYYSQHYPRREGYDDRWQYDPRYDSSFDDEFVKRREPYGDECDRR
SVHSEHSARSVHSTRSQNSRRSSFSSRSQQSQVYRSQPDLVATGYDVSGQPVSGPTNYSY
SHYHDNVDGHQGFSEYPYQPGYVPDSTWPSVEQVPPRPATPEKFSIPHMCGRFGPGGQLL
KVLPNLPSEGQPALVEIYSMEVILQNTQEQQDLLSFPGPLVKGETHKVDVIKFAQNRALE
CLRNECLIDRDSANLIWEFIVLLCRQNGTVVGTDIADLLLREHKSVWLPGKSPNEANLID
FNNEPLDHVEDESCSGQLSLLTDTFLSLPENAGKETERFRELLLFGRKKDALESAMKHGL
WGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAAATCCGDEKWGDWR
PHLAMVLSNLTNTVDLDSRTIITMGDTLASKGLIDAAHFCYMMAQVGLGVYTKKSTKLVL
IGANHSLPFFKFACNEAIQRTEAYEYAQSLGSQPCLLPNFQVFKFIYACRLAEAGLSSQA
FHYCEVISRTVLKHPSYYSPVFISQLIQISEKLRFFDPQLKEKPEQELFIEPDWLVHLRQ
VDGQIKDGVVSYNSDRATPQQYSCSTPSSEFEHNNQPDGFGITPDIATDNPLMAEPGPQA
LGVHLMPAAPSTVLTSGISSVTQAYPQDDRVSYYQQPASAVSQEVAFASPSLGSVEGFMP
SDSVPLQSLPHHNISPATTFVGPYQTEKQHFHSVPPLLPPGSPAEALPTLPEQDCSGQQE
QKVNSQTSSPTRSTFPSQGQGDFYDQMAYMAPGRRSRTTSQSSMHMGYGRRSRTTSESSN
HSVGRDRSNSASKQPSPPPPSNREKPAHRTEEHNQGSSKGGWFGWLKRRRNNEAHLPDDK
NKSIVWDEKKQRWVNLDEPEEESKPPPPPPSGFPKIAHQVPRGPVGSAGGASAGPPVNIF
SRKAAGSRGRYVDVLNPGGVGPKLSNTVPAPADLFAPLAPMPIPVHFSAPEDQPKEGTTA
EEVQSGQKNNDPLLFNPSFAPNHEASASTEDSHSGELSRCSSMSSLSREVSQHLNQISCP
PTVQGGPPVGGVTFYNPSQFVQQTTQPLGPRAGRINQRRYPTLK
NT seq
7335 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaccacctcaaactgcacctgctggggccactggtcccccaccttcaggagga
ataccaaacattttccggaggagtagtccttataacaggagggcaaatgtaccagtttca
gggtcatctgcaccagtgccacccataacagatccatttgcctttggaaggcagactcct
caaaatgctgtgggaaatcctcttccaaaaagtaatcctctcaccgttcagagtcaagtt
ttgacagagccaccccagactgttccagtccagcatcagatgactttggataataagcaa
ggaattctgccagcatcaggactgggaggagttaatgtgtttacagtgagtaacatggtg
actccagtttcagccatagggcataatagtaatttacttcctatgccagtttcttctagt
ttagattcaggacaatgtaactctgtggcaaacacttctattaatgcacttcagatacat
gatgttagttcagaagtttcatctcgtgaaatagcctctctgcaaaacaggccttcttat
ggacatcataccagaggagatcttggaggagatcttggatcttataactctattgtcccc
agcgcagtacccccaaactctcagccttcagtgataaactggatgcaagacaaccggcca
ccttcagttcacaattacttacagccaagtgagcttcactgtcaaaatcctagtgtttct
tcaataacttcctctttagcaggtgtacactctcagaaacctatccacactgaacacaag
tcaccaatccttcaacacaatgcaagctctttgcagatttcaggaggtaatgaaaagcat
gagatttcagaaaaagcagaagataataaacacctagccttccagcatagcaaacaaaca
tttaattctgacaattatttctcccaaaatattccagagccttggattagccagtctgtt
aaggaccagttctactataaagaagggagagccgaaggaactcaatcaaattcagttaat
agaatgccagactattctgctcaaacaggatttcatgtacaagccaaccacattacatat
gaaacagataagggaacagttggaatgttttttaaaggagatgaaattgaaaatgaagaa
actctttccagtgagagccatgccagtaatggagttcctgtaccagaactatatgttcag
aacctcggaatgttcagtggtcatgtgtcgggtcagttgtcagcaccacaagtgggcaat
gaagtggcacatagtacacaccatagcttagacagtagtgtttcaggtaatggtaattta
cccttgtctaatgaaggaaatacatatttagataacagttcttttaccaatgtttcccaa
aaagtgactgggattcactttgataatgtggaaaacctggaatgcgtaccaaatatagag
gttttgccaagtaaaccacttaatgccccaggtatacatcagagtcctgtggagaacatg
ggcattgatttagggccctgtactggaaagcctgtgtctggcattgctgacagttttgaa
gctggccctaacttggagacaccagattcagtacctcataccgttagatctgaaagtgtt
tcctcaggctatagtaatgtaagtcatagcagtaactccaactgtcgaagacctcaagga
gtagtaggaacatttattcagcaggaagttgcaaaacctactgaggaagtgtctccgaac
tattttgaacaaattgacacatcaccttctgcagagtttattgaagaaaatggccctaat
ggtgtatatcacaaagaactttctcagccttctacacccagccctcctaaaccaactggt
acatttcgggccagtgcaaatagctcctttgaaccagttcgctctaggggagtaggagta
aaacctgccgagattgataaagctcgattggtaatggaaaaatcacaagatacttttgtg
tctgatgcctcacctgggaaccttgagcatcctcctgataacctggaaactctgttcatg
cctcatccactttcatctactgcaaatactaagattggtttggaaaatgttcagatggtg
cctgataaaagaccctcaaacagagcaaatgctacacgtttgaaatgccagagtcctgcc
actacactttgggcccaaaatgaaatgccagttttaggagccaatattctccttgttcca
gcagcccctgcggtgcatcatagtttagttaagcagccaagtacagaagttattcagcca
ccagaagacggtcctttggaacatcagctggaacagcaagttcaagcccaggattctctg
tctttcaaacctaggacaactttagagaatttggagaacccaccaaccatagggactgat
gaatacttgaagcagcatccaaatgtgagttatgcaagcctattaatcccttccccacca
gctgattcatttaataatcaaacccatttgattgcccaacctactcaaaattacactctt
gctccatcaaataattgtccagtgtctgtacctaatcagagtaataaaaatttatttgat
tcattaaatcgaagcgcaaatgaactgatcttgcctggagcaagcgtggcacccatagcc
aattcaggtcagacaggtttaagtataaattcatctctgcctaataaacagtggccacaa
ttttctgtaacttcaaatcagcctggaattaccagttctcagccagcaaacttgtcagtt
caaaccctcccaggtcaggctccccttaatttagctcaagacagtcgatcaaatgagaaa
aggtctccagaaagtgcttcttttgatccatctacaagtttatcaaattcttcatctgat
cccagcttgcttcaggttcaaaatgtaaatccttcgttttctgagagtaacacacagaca
cagactattgttacacatcaggtttcctctaattatgaacttcttgatttcactatgcat
gcagtcaatcaaagcagaagttcatctcaatcgagtcagttacctgctactggttctcac
ccttcaacatctgcttccgtaggcatgaagcaggaaagtcaagccattaacgcttcagat
ttttatctccaggttaccaaagatgctaaattgtcaacagtgagtggaatagaacagaat
ggacaaccaaagctactgccaagtctgccttctcaacagaatactgttaacagttcccaa
ccaacaaccaacatataccaccagtcacctcctccagcagtttttcatggaaatgatgca
caggatggaaagtcagtaacatctaataaaaattatccaccagtgcaccttgtcccaaaa
gaatctcttgaaagtgaagcttctgatcctcaatcaagatatgaaaatgctgcacctaaa
gttccactgaatcccatgtatgttcctccaggtgctgatttgcagacccagtcttttaat
tcttctctgcagtttcctcaagtgtcacgcccaggcccttcacatacaccacagcagatg
tatggaccacctccacaacagcagatttcaggttatggatattatggtggtggtgcttat
cctgattattcaggtggaagacaagggccctatccatccccatacccacttgacccaagg
actgctcaagcatattataaggaggaacagtacagaaggtatgaccgaattggccagtat
gaaagctacaatccaactcgggaaactgaaagacatccataccctgaacaaccagagcgg
ccctgctctcgaggcagtcagtattcagacagacctccttcacgcagacaaggtcattct
gaagattactaccaaagaggagctcccagtgcctttgattactactatggagatcctagc
ctttgggatccccgatatgatccagctgcctatgatcctcgatatcatgaatattatgat
ccacgttattggtactatgatctagaagcttacagacgcagggatccatattacagccag
cattaccccaggcgtgaaggatatgatgatcgctggcagtatgatcctcgttatgattca
agttttgatgatgagtttgtaaagcggagagagccctatggtgatgaatgtgaccgacga
agtgtccacagtgagcattcagcccggagtgtgcatagcacccggagccaaaatagtcgc
aggagtagcttcagctctcgatctcagcagagtcaagtttacagaagtcagccagacctt
gttgcaactggatatgacgtctcagggcagcctgtatctggtcccacaaattactcatat
agtcactatcatgataatgtggatggccaccagggcttttcagaatacccttaccaacca
ggatatgtgccagatagcacttggccatcagtggaacaagtacctccaagacctgctacc
ccggagaagttttccatcccacacatgtgtggacgctttggtccaggaggtcaactgctt
aaagttcttcccaaccttccttcagagggccaaccagctttggtggaaatttatagcatg
gaggtcatacttcagaatacacaagaacaacaagacttgctatcattcccagggcctctt
gtcaaaggggaaacgcacaaggttgatgtgatcaaatttgcacaaaacagagctctagag
tgtctaagaaatgaatgcctaattgatagggattcagcaaatctcatatgggagtttata
gtactgctgtgccgtcaaaatgggactgttgttggtacagatattgcagacctgctactt
cgtgaacataaatctgtttggctacctgggaagtctccaaatgaagctaaccttattgac
tttaacaatgagcccttggaccatgtagaggatgagtcatgctctggacaactttctctt
ctcactgacacatttttaagtctccctgagaatgctggcaaggaaactgaacgattcaga
gaactgttgctttttggaaggaaaaaggatgcattggaatctgccatgaaacatggactt
tggggacatgcccttttattagctagcaaaatggacagcaggactcacgcaagggttatg
acgagatttgctaacagcctccccattaatgatcctttgcagacagtatatcagttgatg
tccgggaggatgcctgcagcggcaacatgttgtggagatgaaaagtggggggactggagg
cctcatctagcaatggtattgtccaatctcaccaataccgtagaccttgattcccggaca
attattactatgggagacacgcttgcttcaaagggactcatagatgctgcccatttctgc
tacatgatggctcaagttggactgggtgtttacaccaaaaaatcaacaaaacttgtttta
attggagcgaatcacagtttgccattttttaagtttgcctgcaatgaggccatccagcga
actgaagcttatgagtatgcccagtctttaggatctcaaccctgcttgctgccaaacttt
caagtatttaaatttatttatgcttgccggttagctgaagcagggctttcttctcaggcc
ttccattactgtgaagttatttcaagaacagttttaaagcatccttcatattattctcct
gtgttcatcagccagcttatacagatttcagagaaactcagattctttgatcctcagctg
aaagaaaaacccgaacaagagttatttattgaaccagactggttagtgcatcttcgacag
gtggacggtcaaataaaggacggagtagtctcctacaattccgatagagctacaccccag
cagtactcatgcagtacccctagctctgaatttgaacataacaaccaaccagacggcttt
ggaataacaccagatatagccactgacaacccactgatggcagaaccaggaccacaagct
ctaggagttcatcttatgccagcagctccttccacggtcctcactagtggcatttcttca
gtcacccaggcatatcctcaagatgacagagtttcttattaccaacaacctgcctcagct
gttagtcaagaggtggcttttgcctccccttctttgggatcagtcgaaggcttcatgccc
tcagactccgttccattgcagagtcttccacatcataatataagcccagcaacaacattt
gttggaccgtatcaaacagaaaaacagcattttcattcagtgccccctttgttaccacca
ggatccccagctgaagctcttccaactttgcctgaacaggattgcagtggtcaacaagag
caaaaggtaaattctcagacctcctcaccaacaagaagtacgtttccttcacaaggacaa
ggggatttttatgaccagatggcttacatggctccaggcagaaggtcaagaacaacgtct
cagtcttcaatgcacatgggctatggaaggcgttctcgcacaacgtcagaatcctcaaat
cattctgtgggaagggacagaagcaactctgcttctaaacagccctcacctcctccacca
tctaatcgtgagaagccagcgcacagaacagaagaacacaaccaaggaagttccaaggga
ggatggtttggttggctaaagcgcagaagaaataatgaggcacatcttccagatgacaaa
aacaaatcgattgtttgggatgaaaagaagcagcgatgggttaatctagatgaaccagaa
gaagagagtaaacccccacctcctccaccatctggctttccaaagattgcacatcaggtg
cctcgtggtcctgtagggtcagctggaggtgcaagtgcaggtcctccagtaaacatattt
tccaggaaagctgcaggaagcaggggcagatatgtggatgtcctcaacccaggaggagtt
gggcccaagctcagcaacacagtcccagctccagcagatttgtttgcacccctggcccca
atgcctattcctgttcatttttcagctcctgaagatcaacccaaagaaggtactacagca
gaagaagtgcagagtggacaaaagaacaatgatcctctgttatttaatccatcttttgct
ccaaaccatgaagcttcagcaagtacagaagactcgcattctggcgagctctcccgttgt
agctcaatgagttcattatctcgtgaagtcagccagcatttaaatcagatttcttgccca
ccaactgttcaagggggaccacctgttggaggagtaactttctacaacccctctcagttt
gtgcagcaaacaacacagccactgggcccaagagctggaaggatcaaccagagaagatac
ccaaccctgaagtga
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integrated database retrieval system
