Polypterus senegalus (gray bichir): 120535879
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Entry
120535879 CDS
T08668
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
psex04514
Cell adhesion molecule (CAM) interaction
psex04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120535879 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120535879 (ncam1a)
04517 IgSF CAM signaling
120535879 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120535879 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120535879 (ncam1a)
04090 CD molecules [BR:
psex04090
]
120535879 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
psex00536
]
120535879 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psex00537
]
120535879 (ncam1a)
04091 Lectins [BR:
psex04091
]
120535879 (ncam1a)
Membrane trafficking [BR:
psex04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
120535879 (ncam1a)
Cell adhesion molecules [BR:
psex04515
]
Immunoglobulin superfamily
NCAM1/2
120535879 (ncam1a)
CD molecules [BR:
psex04090
]
Proteins
120535879 (ncam1a)
Glycosaminoglycan binding proteins [BR:
psex00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
120535879 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psex00537
]
Others
120535879 (ncam1a)
Lectins [BR:
psex04091
]
I-type lectins (Siglecs)
120535879 (ncam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
FN3_DSCAM-DSCAML_C
V-set
V-set_CD47
C2-set_2
Izumo-Ig
C2-set_3
Ig_C17orf99
Ig_PDGFR_d4
Adeno_E3_CR1
Pur_ac_phosph_N
Collagen_bind_2
MBD
Motif
Other DBs
NCBI-GeneID:
120535879
NCBI-ProteinID:
XP_039619943
LinkDB
All DBs
Position
9:complement(144249855..144962399)
Genome browser
AA seq
1143 aa
AA seq
DB search
MLQTRDLIWALLFFAAADLGFSSKAPLQITISPHQGEVSVGESKFFQCTVNREADDISWY
SPTGKKLESNQQEISVVRNDEVSSTLTIYYAGIDDAGIYRCVATADGKEAEATVSFMVFQ
KLTFLNVPSPQEFNDGDDANIICNVTSSPAPTVIWKHAGKDVTSKKDVRFSILGNKYLQI
RGIKKTDEGTYRCEGRILARGEIDFRDIKVIVNIPPTIRTRHAELNATADIGASVTLSCD
ADGFPEPSVSWARNKVVLERGDKYSFNSDGSEMTIFNVKKIDQGEYTCIAKNKAGEKEQE
ISLNVFVKPKITFAQNKTALELDDQVLTCEAIGDPTPSIVWRFGHRVFSEGEQHTNDRIY
QASWTRPDTYKTLDGSFIVRSDARVSSLTLKNIQYTDAGQYICTATNAIGQDSKSMFLEV
HYSPKLQGTVAVYTWEGNPVNITCEVLAHPQASVIWFRDGQQLPSSNATNIKIHNTPTSS
LLEITPDSQSDFGNYNCTASNRIGQDSKEFLLIQAEVPSTPMINIVEPFSSTAKIEFEEP
DSSGGVPVLKYKAEWRELGNIHWFKKEYDARDVYAENLITISGLKPETNYEVRMSAINGK
GEGEFCQPSIFKTAPVRYFYSLPTLSTDTLSSNGTVPITDEGEPSMPKLEGTIQDTGNTL
KVKVKWIKQDDGGSPIKHYLVRYKAKQVQDWKPEIKLPALSDYAVITGLEWNTEYEVSVE
AVNQQGKSKPAIFMFRTSPQPTAMPGKIAQSSGLSTGGIVGILIVVFLILLVAVDVTCYF
LNKCGLLMCIAVNFCGKSGPGAKGKDIEEGKAAFSKDESKEPIVEVRTEDERTPNHDGGS
QTEPNETTPLTEPEHPADTTATVEDMLPSVATNSDTITETFATAQNSPTSETTTLTSSTA
APGPDIKSAPVQQASTPKASVTSPTSPAASTTDAAPKVARLVDLSEVPPANSTASPSLNS
TAATNAAEPAKAASSTKAPAPAAPVASPAAAVSNTPSEKPKTEATKSPESETAQSNTVKS
STEAVTKPTSPKSSAPPEINEKPSQNEDFQMDGGPFKTSDIDLATDVFAALGSAPVPSVA
GKPAPELVSSPADSTNASAPAKDEKTPIEDKTKPEEVENKKPPTEVKTIPNEATQTNANE
SKA
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaccagggatctcatctgggcattgctattctttgccgctgcagatttgggg
ttttcttctaaagccccattacaaatcaccatttctccacaccaaggggaagtcagtgtt
ggagagtccaagttctttcagtgcacagtcaaccgtgaagcagatgacatctcctggtac
tcaccaactggaaagaaactggaaagtaaccagcaagaaatctcagtggtccgtaatgat
gaagtgtcctccacccttacaatctactatgcaggcattgacgatgctggaatctacaga
tgtgtggcaactgctgatggaaaagaagctgaagcaacagtcagctttatggtttttcaa
aaattgaccttcctaaatgttccatcacctcaggagtttaatgatggagatgatgccaac
ataatatgcaacgtcaccagctctcccgcccctactgttatctggaagcatgcaggcaaa
gatgttacttcgaagaaggatgttcgtttcagcatccttggtaacaagtacctgcagatc
cggggcatcaagaagacagatgaagggacatatcgttgtgagggccggatcctggcacgt
ggagagattgacttcagagacattaaagtcattgttaacattccaccaactattcgaaca
aggcatgcagaattgaatgcaacagcagatatcggagcatctgtgaccttatcctgtgat
gctgatggattccctgagccatcagtgagctgggctcggaataaagttgttttggaaagg
ggtgataaatacagctttaacagtgatggttcagaaatgactatctttaatgtgaagaag
atcgatcaaggagaatacacctgcattgccaagaacaaagctggtgaaaaagaacaagag
atcagcctaaatgtttttgtaaaacccaaaatcacctttgcacaaaataagacagcattg
gagctagatgaccaggttttgacatgtgaagccattggcgatcctaccccatctatcgtg
tggcgttttggccatcgggtattctctgaaggagaacagcatacgaatgacaggatttat
caggcttcatggacccggccagatacatataagactttggatggcagtttcatagtgaga
agtgatgccagagtttcctctttgactctcaagaatatccagtatacagatgccggacag
tatatttgcactgccaccaatgctattggacaagattccaagtccatgttccttgaagta
cactattccccaaagctccaaggcacagtagcagtgtacacctgggaaggaaaccctgtc
aatattacctgtgaggtcttggctcacccacaagcctccgtcatctggttccgagatggc
caacagcttcccagctccaatgccaccaacatcaagattcacaacaccccaactagcagc
cttctggagattactcctgattcccagagtgactttggcaattacaactgcacagcctct
aaccgcataggacaagattccaaagagttccttcttattcaagcagaggtcccatctacc
ccaatgatcaacattgtggaaccattttccagcacagcaaagattgaatttgaagagcca
gactcctctggaggtgtcccagttctgaagtataaggcggaatggagagagcttggcaac
attcattggttcaagaaagagtatgatgccagagatgtatatgctgaaaatctgattacc
atttctggtctgaagcccgaaactaattatgaagtaaggatgtctgcaatcaatggcaag
ggagaaggagaattctgccagccctctatattcaaaacagcaccagttcgctacttttac
tcactacctacactgagtacagataccctttcttcaaatggcactgtccccatcacagat
gaaggagaaccaagcatgcctaaactggaaggcactatacaggatactggaaacactctg
aaggtgaaggtcaaatggatcaagcaagatgatggaggttctcccatcaaacactatctg
gtcagatacaaggctaaacaagtccaggactggaaacctgaaatcaagcttcctgctctc
agtgattatgctgttatcactggccttgaatggaacaccgaatatgaggtttctgtggag
gctgtaaaccagcagggaaaatctaagcctgcaatctttatgttcaggacctctccacag
ccaactgctatgccaggtaaaatagcacaaagcagtggtttgagcacaggtggcattgtt
ggtatcctcatcgtggtcttcctcattctgctggtggctgtggacgtcacgtgttatttc
ctcaacaagtgtggtttgttgatgtgtattgctgtgaatttctgtggcaaatctggacct
ggagcaaaaggcaaagatatcgaagagggaaaagctgcattttcgaaagatgaatccaag
gagccgattgttgaagtgagaactgaggatgaacgtactcctaatcatgacggaggcagc
cagacagaacccaatgaaaccactcctttaactgagcctgagcaccctgctgacacaaca
gctactgtcgaggacatgcttccttctgttgctactaactctgacacaatcactgaaacc
tttgccactgcccaaaacagtccaacgagtgagactactactctcacttcaagcacagct
gcccctgggcctgacattaaatcagcgcctgtccagcaggccagcacaccaaaggccagt
gtcacttctcccacatctcctgctgcctcaaccacagatgctgcacccaaggttgcccgc
ttggttgacctcagtgaggtcccaccagccaatagtacagcttcacccagtctgaattcc
acagctgccaccaatgccgctgagcctgctaaagctgccagcagcaccaaggcacctgcc
ccggcagccccagttgccagcccagcagcagctgtgtctaacactccttctgaaaagccc
aaaaccgaggccaccaagagcccagaaagtgaaacagcacagagcaacaccgtgaagagt
tccactgaagcagtgacaaaacccactagcccgaagagttcagcccccccagaaatcaac
gaaaagccctcccaaaatgaggactttcaaatggatggaggacccttcaagacctcagat
atcgaccttgcaacagatgtctttgcagctctgggcagtgctcctgttccctctgtggct
ggcaaaccggctcctgagcttgtttcgtctcctgcagactccaccaatgcatctgctcca
gccaaggacgagaaaactccaatagaggataaaaccaaaccagaagaagtggagaataag
aaaccgccaacggaagtgaaaactatccccaatgaagccacacaaacaaacgcaaatgag
agcaaagcatga
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integrated database retrieval system
