Polypterus senegalus (gray bichir): 120535884
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Entry
120535884 CDS
T08668
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120535884 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120535884 (cadm1a)
Cell adhesion molecules [BR:
psex04515
]
Immunoglobulin superfamily
Nectin family
120535884 (cadm1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
C2-set_3
HK620_9_C
MGC-24
Syndecan
New_glue
Motif
Other DBs
NCBI-GeneID:
120535884
NCBI-ProteinID:
XP_039619967
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Position
9:151287527..152374217
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AA seq
451 aa
AA seq
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MANVGSGSLSTSLFLLFVSAAFPLKGAAQTIQAFGQNLETDNVSVVEGETATISCRVKDN
DDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFTDNELRVALSNVSISDEGRYVCQLYTD
PPQEAYAEITVLVPPGNPMIESREDIINEGNETEITCSVTGSKPAAKIRWLKGGKELQGN
SSIKEDDEKMYTVTSKVILTVTKDDDGVPVICMVDHPAVKDFQTQKYLEVQYKPKVMIIK
SSPKEDPREGERLELSCTVESKPKAQFVRWIKVDDELPLQTSLKGSELSIENLNKSYNGT
YRCMAANSIGESWADFNLIVRDAPTTTPLPTTTTSPTTTSSTTTSTATTTSVMSTAIEDN
SPTSEPAVHDSRASDAGPRGVDHAVIGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEA
KGADDAADADTAIINAEGGHNSTDDKKEYYI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtggggagcggatctctctctacatctctctttttactcttcgtttctgca
gcttttcctctgaaaggagctgctcagaccatccaagcatttggtcaaaacctggagact
gataatgtctcagtggtggagggagagacagccaccatcagctgccgagttaaagacaac
gacgactctgttattcagctcctcaatccaaacagacagaccatctacttcagggatgta
agaccattgaaagacagccgttttcagctggtcaacttcactgacaacgaattaagagtg
gccctgtctaatgtgtcgatttctgatgaaggaagatacgtatgtcaactgtacaccgac
cctcctcaggaagcctatgccgaaattactgtactggtcccaccaggcaacccgatgatt
gaatcccgagaggacatcatcaatgaaggaaacgagacagaaataacgtgctctgtcaca
ggaagcaaacctgctgccaaaatcagatggctgaagggaggcaaagagctgcaagggaac
tcttcaatcaaggaagatgatgagaaaatgtacacagtgactagtaaagtgattctcacc
gtcaccaaggatgatgatggagttcctgtcatctgcatggtggatcatccagctgtgaaa
gacttccagacgcaaaaataccttgaagttcagtataaacccaaagtgatgatcatcaag
agctctccaaaggaagatccaagagaaggagaacgcttagaactgagctgcacagtggag
agtaaaccaaaagctcagtttgtacgttggatcaaggtagatgatgagctgcctctccag
acatcactgaaagggtcagaactgtccatcgagaatctgaacaagtcctacaatggcaca
tacagatgtatggcagccaactccattggggaatcctgggctgactttaacctcattgtg
cgtgatgctcccactaccacccccttacccactacaaccacctctcccactacaaccagt
tccactaccacttccaccgccaccaccacctctgtcatgtcaactgccatcgaagacaac
tcgccgacttcagagcctgcagttcacgactctagagcgagtgatgctggacccagagga
gtagaccatgctgtcatagggggagtcgttgcagtggttgtgttcgctatgctgtgcctc
cttattattctcggacgatattttgccagacacaaagggacctattttacccatgaagcc
aaaggtgcagatgatgcagcagacgcagacactgcaatcatcaatgcagaaggaggccac
aacagtacggacgacaagaaagagtattatatctaa
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