Polypterus senegalus (gray bichir): 120535988
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Entry
120535988 CDS
T08668
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04140
Autophagy - animal
psex04148
Efferocytosis
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120535988 (vps11)
04148 Efferocytosis
120535988 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120535988 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120535988 (vps11)
Membrane trafficking [BR:
psex04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120535988 (vps11)
Hops complex
120535988 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-rbx1
zf-RING_2
zf-C3H2C3
zf-C3HC4
Beta-prop_EML_2
zf-ANAPC11
TPR_GEMI5
zf-RING_5
WD40_Prp19
Beta-prop_RSE1_2nd
GHL13
zf-RING-like
DivIC
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
120535988
NCBI-ProteinID:
XP_039620182
LinkDB
All DBs
Position
9:171461449..171488171
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AA seq
927 aa
AA seq
DB search
MAAFLQWRRFVFFDKEAIKDPADSGKPFNLPQGISASDSGRGHIVFGDMSGQIWFLTRSS
QLSNFQAYKLRVTHLYQLKQHSILVSVGQDDEGINPLVKVWNLDKRDSSSPLCTRIFPAI
PGNKPTEVSCLTVHENLSFMAIGFTDGSVVLTKGDITRDRHSKTHTLHEGSCPITGLAFR
QSGKTTHLFVATLEKVLCYTLSVKEYPCTELDVHGCALRCTSLTDPSQDSQFIVAGDECV
YLYQPDERGPCFAFEGQKLLAHWHRGYLVLLSRDKKSPNKSQFGSRETLTSEKQILNIYD
LDNKFIAYSGTFEDIIDVVAEWGSLHILTRDNGLLVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDTDGLSEIFRQYGDHLYVKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSTKLEEFIKTSESEVHFDVEIAIKVLRQA
GYYQHAVFLAERHDQHEWYLKIQLEDIKNYQEALCYIGRLPFDQAESNMKRYGKTLMHHA
PEETTDLLKGLCTNYQPNGEVGTVSLETQRKKANAEEFIHIFANHPRELRAFLEHMIQVE
AESPQGVYDTLLELRLQDWAHEEDIKKKKALQGEALSLLKSGCYSTVFDKALILCQMHNF
KEGVLYLYEQGQLYQQIMHYHMQNEDYGKVVEACQRYGDKETCLWEQALGYFARKEEDCK
EYISAVLQHIDRYSLMPPLLVVQTLAHNSTATLSVIKDYLINKLHQESEQIEEDERKIRT
YREETAQLRQEIQELRSSAKIFQKTKCSMCNSPLELPSVHFLCSHSFHQHCFESYAESES
ECPTCAPDNRKVLDMLRAQDQKRDQHELFQRQLKCSKDGFSVVADYFGRGVFNKLTLITD
PPTGKSTTSSLEADLNRDLLIHTKRTS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggctgcatttttgcagtggagacgctttgtcttttttgacaaagaggcgataaaggat
cctgcagacagcgggaagcccttcaacttaccacaagggatttccgccagtgactccggc
cgggggcatatcgtttttggagatatgtctggacagatctggtttctgactcgctcttcc
cagctctccaactttcaagcctacaagcttcgagtaacacatctttaccagctgaagcag
cacagtatcttggtgtctgtggggcaggacgatgaaggcatcaacccactggtgaaagta
tggaatttggacaagcgagatagcagcagtcctctgtgcacacgcatttttccagccatt
cctggaaacaaacctacagaagtgtcctgccttactgtacatgagaatctcagcttcatg
gccattggttttacagatggcagtgtggtcttgacaaagggtgacatcactcgggaccgg
cacagcaagacccacactttgcatgaaggcagctgtccaatcacagggcttgcttttcgt
caatcggggaagaccacacatctgtttgtggcaacactggaaaaagtgctgtgctacact
ctgtctgtaaaagagtatccctgcactgagctggatgtgcatggctgcgctctgcgctgc
acctcgctgacagacccctcgcaggactctcagttcattgttgcaggggatgagtgtgtt
tatctttaccaacctgatgaacgtggaccatgctttgcatttgaggggcagaaactcctg
gctcattggcaccgtggctaccttgtgctactaagccgtgacaagaaatctccaaataag
tcacaatttggcagcagggaaactctgacatcagagaagcagatactcaacatctatgac
cttgacaataagttcattgcctatagtggaacctttgaagacatcattgatgttgtggct
gagtggggctctttgcatatcctgacacgggataatgggctgctagtgcttcaggagaag
gacacgcagacaaaattagagatgttgttcaagaaaaacctttttgtgatggcaattaat
ttggcaaaaagccaacatttagacactgatggtctttccgagatcttccgccaatatgga
gaccatctgtatgtaaagggagaccacgatggcgccatccagcagtatatccggactatt
ggaaagctggaaccctcctatgtaattagaaagttcttggatgcgcaaagaattcacaac
ctaaccgcctacttgcaagccttgcacagacagtccctcgctaacgctgaccacaccacc
ctgctgctgaattgttacacaaagctaaaggacagcaccaagttagaggaatttatcaag
acaagtgagagtgaggtgcactttgatgtggagattgccatcaaggtcctacgccaggct
ggctactaccagcatgctgtgtttttggcagagagacatgaccagcatgaatggtacctt
aagattcagctggaagacatcaagaactatcaggaggcattgtgctacattggtcgtttg
ccctttgatcaggcagagagcaacatgaagcgctatggcaagacattaatgcaccatgcc
cctgaggagaccactgacctgttgaaagggctgtgcaccaactaccaacccaatggtgaa
gttggcactgtttctctggaaacacaaagaaagaaggcaaatgctgaggagttcattcac
atttttgccaaccacccacgggaactgagggccttcctggagcacatgattcaggttgag
gctgagtcgccacagggcgtgtatgacacactgctggaacttagactgcaggactgggca
catgaggaggacatcaagaaaaagaaagccttgcagggggaagctttatcattgttgaaa
agtggatgctacagcactgtatttgacaaagcacttatactctgccagatgcacaacttc
aaagaaggagttctgtacttgtacgagcagggccaattataccagcagatcatgcactac
catatgcagaatgaggactacggaaaggtagtcgaggcctgccagcgctatggagacaag
gagacatgtttgtgggagcaagcacttggatactttgcccgcaaagaggaagactgcaaa
gagtatattagtgctgtgctgcaacacattgaccgctacagtctcatgccacctctgctg
gtggtgcagacgttggcccataattcaacagccacactttcagtcattaaagactacctt
atcaataaactacaccaagagagtgaacagattgaggaagatgagcgtaaaattcgaaca
taccgggaagagactgctcaactccggcaagagattcaggaactgcgtagcagtgcaaag
atctttcagaagactaaatgcagtatgtgtaacagcccattggagctgccatcagtgcac
ttcctgtgcagccactccttccaccagcactgctttgaaagctatgcagaaagtgagtca
gagtgccctacctgtgcacctgacaaccgcaaggtcctggacatgttgagggcacaagat
caaaaaagggatcagcatgaactcttccagcgacagctcaaatgctctaaagatggcttt
tctgtggtagcagactattttggtcgtggagtgtttaacaagctgactctaatcactgac
cctcctacgggcaagtctactactagcagtttggaggctgacctaaacagagatcttctc
atccacaccaagagaacatcttga
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