Polypterus senegalus (gray bichir): 120535999
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Entry
120535999 CDS
T08668
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120535999 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120535999 (exosc2)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120535999 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
120535999 (exosc2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
EXOSC1
Lantibiotic_a
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
120535999
NCBI-ProteinID:
XP_039620204
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All DBs
Position
9:173116113..173138170
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AA seq
292 aa
AA seq
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MAADMRLPAPRKRSTNLPKEHGKHLVAPGDVITTDSGFMRGHGTYMDDEKLVASVAGVVE
RVNKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGELR
RRSSEDELAMREYLQEGDLISAEVQSVFADGALSLHTRSLKYGKLGQGVLVQVSPSLIKR
RKTHFHNLTCGASIILGNNGYVWIYPTPAEQNEEAGGFVTNTEPVPLSDREVISRLRNCI
LALSVHKMLLYDTSILYCYESAFHHQIKDILKPEIMEEIIEETRRRILEQEG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgacatgcgtcttcccgctcctcggaagcgttccaccaatttaccgaaggag
catggcaagcatctcgtggctcctggtgatgttattactacggactctggcttcatgagg
ggtcatggaacatacatggacgatgaaaagcttgtggcatctgttgctggagtggtggag
cgtgtgaacaagctgatttgcgtcagacctctgaaaactaggttcaatggagaagttggg
gatgtggtggttggcagaataacagaggttcagcaaaaaagatggaaagtggagacaaat
tctcgcttggattcagtgctactgctatcatctgttaatcttccaggtggagagctaaga
cgaagatcttctgaagatgaattggctatgagggaatatttacaagagggagacctcatc
agtgctgaggtgcaatcagtgtttgcagatggtgctttgtctcttcacacccgtagtctt
aagtatggcaagctgggtcaaggtgtgctggtgcaagtgtctccttcattgataaaacga
cgtaagactcatttccacaacctcacttgtggtgcatctatcattctaggaaataatggt
tatgtgtggatatacccaactccagcagagcaaaacgaagaggccgggggctttgtgact
aatactgagccagttcccctctcggacagggaagtaatctcaaggttacggaactgcatt
cttgcattgtctgtgcacaagatgctgctgtatgataccagcattctgtactgctatgaa
tctgcattccatcatcagatcaaggacattctgaagccagaaataatggaggagataatc
gaagagacaagacggcgtattctggaacaggagggttag
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integrated database retrieval system