KEGG   Polypterus senegalus (gray bichir): 120535999
Entry
120535999         CDS       T08668                                 
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120535999 (exosc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psex03019]
    120535999 (exosc2)
Messenger RNA biogenesis [BR:psex03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     120535999 (exosc2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     120535999 (exosc2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 EXOSC1 Lantibiotic_a RRP40_S1
Other DBs
NCBI-GeneID: 120535999
NCBI-ProteinID: XP_039620204
LinkDB
Position
9:173116113..173138170
AA seq 292 aa
MAADMRLPAPRKRSTNLPKEHGKHLVAPGDVITTDSGFMRGHGTYMDDEKLVASVAGVVE
RVNKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGELR
RRSSEDELAMREYLQEGDLISAEVQSVFADGALSLHTRSLKYGKLGQGVLVQVSPSLIKR
RKTHFHNLTCGASIILGNNGYVWIYPTPAEQNEEAGGFVTNTEPVPLSDREVISRLRNCI
LALSVHKMLLYDTSILYCYESAFHHQIKDILKPEIMEEIIEETRRRILEQEG
NT seq 879 nt   +upstreamnt  +downstreamnt
atggcggctgacatgcgtcttcccgctcctcggaagcgttccaccaatttaccgaaggag
catggcaagcatctcgtggctcctggtgatgttattactacggactctggcttcatgagg
ggtcatggaacatacatggacgatgaaaagcttgtggcatctgttgctggagtggtggag
cgtgtgaacaagctgatttgcgtcagacctctgaaaactaggttcaatggagaagttggg
gatgtggtggttggcagaataacagaggttcagcaaaaaagatggaaagtggagacaaat
tctcgcttggattcagtgctactgctatcatctgttaatcttccaggtggagagctaaga
cgaagatcttctgaagatgaattggctatgagggaatatttacaagagggagacctcatc
agtgctgaggtgcaatcagtgtttgcagatggtgctttgtctcttcacacccgtagtctt
aagtatggcaagctgggtcaaggtgtgctggtgcaagtgtctccttcattgataaaacga
cgtaagactcatttccacaacctcacttgtggtgcatctatcattctaggaaataatggt
tatgtgtggatatacccaactccagcagagcaaaacgaagaggccgggggctttgtgact
aatactgagccagttcccctctcggacagggaagtaatctcaaggttacggaactgcatt
cttgcattgtctgtgcacaagatgctgctgtatgataccagcattctgtactgctatgaa
tctgcattccatcatcagatcaaggacattctgaagccagaaataatggaggagataatc
gaagagacaagacggcgtattctggaacaggagggttag

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