Polypterus senegalus (gray bichir): 120536026
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Entry
120536026 CDS
T08668
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
psex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120536026 (gle1)
03015 mRNA surveillance pathway
120536026 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120536026 (gle1)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120536026 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
120536026
NCBI-ProteinID:
XP_039620254
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All DBs
Position
9:174913215..174972271
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AA seq
704 aa
AA seq
DB search
MPYDNRCMETLDALRNSSKGKLTYNPEGPWFIEDIHDNSDFILGLSPQPDWVYERLNHEK
DASFRVIHGLSGSPCVSPSPSPSPGQEVKKEEQQLEEEEEEEEESKMEVQTADEEKPQDD
PSAQTTLLSPHDTQVQGCICLFEEIHRGKAKEQLMQRQETQALVMEDIANQELEQMKRFD
ELKALKQRQELQRLRDLEEQSSQEALGRQEKIREKMREEYRTRAKMREAREAEVQRQREA
ELLRQRQMEGRERLRRLNSIQEEVLQLQLLIDPAVSQTGSDLPEYRIRGNQLCGLISEVI
QASSQTQFPTPEDVSNSERALQDMRGMISSMQQEVSQALQLKKRKEEEELARQQQTVQQK
AKEPVQPTPAPSSGQKVKVKKEGLQTKAEPTTLERYRQLQDLCTQCAQSFEDLNSSRDSQ
TKKLKMELQKAASIPVSQISSISGSKLREVFDKISMLLSGRLVQSGGKSISVTQHPQGLD
FVCFKLAEKFVKQGEEEVASHHEAAFPIAIVASGISELYPKVGDLILAHLHKKCPYAVPF
YPPMKDGMSFEDYQRVLGYRVEGSTAESQDSFMKRMSGMIRLYAAMIQLRWPYGNKQAPC
SFGLNLGWCWLAQILDMEPLADVTATLLFDFLEVCGNALVNQYQGQFWKLILLIKEEYFK
RIEAVTSTGQMGSLMRLKQFLEKCIGRREIPVPKGLMSSSFWRS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgccttatgataatcgctgcatggagacgctagacgctctccgtaactccagtaaaggg
aagctgacttacaatccggagggtccttggtttatcgaggacattcatgataactctgac
ttcatccttggcctttctcctcaacctgactgggtttacgagcgccttaatcatgaaaaa
gacgcctcattccgtgtgatccatggtctctcgggcagtccttgtgtttctccttcacct
tccccatcaccaggtcaggaggttaagaaagaagaacagcagctggaggaggaagaggag
gaggaggaggagtcgaagatggaagtgcagacagcagatgaggagaagccacaggatgac
cccagcgcacaaactaccctgttgtctccacatgatacacaagttcagggctgtatctgc
ctttttgaagagattcacaggggaaaagcaaaggagcagctgatgcagcggcaggagact
caggcgctggtaatggaggacattgccaaccaagaactggaacaaatgaaacgctttgat
gaactgaaggcactgaagcagcgtcaggagctgcagaggcttcgagatctggaagagcag
agctcccaggaagctttggggcgtcaagagaagatccgagaaaagatgagagaagaatat
cgtactagagcaaagatgcgggaagctcgggaagcagaggtccagcgacagagggaagca
gaactcctgcgtcaacggcaaatggaggggcgagagcgcctgcgaaggttgaactcaatc
caggaggaggtgttgcagttacagctgcttatcgaccctgcagtttctcaaactggcagt
gacctgccggagtacaggattcgtggcaaccagttatgtggcttaatttctgaggtcata
caggcaagctcacagacacagtttccaacccctgaagacgtgtctaacagtgaaagggct
ctacaggacatgaggggaatgatttcctccatgcagcaagaagttagtcaagctttacag
ttgaagaagaggaaagaagaggaggaactagcaagacaacagcagactgtgcagcagaaa
gcaaaggagcctgtgcagccgactccagctcccagctctggacagaaagtgaaagtgaaa
aaagaagggctgcagacgaaagccgagcccaccactctagagaggtaccggcagctgcaa
gacctgtgcactcagtgtgcccagtcgtttgaggatctgaacagcagcagagactctcag
actaagaaactgaaaatggaattgcagaaagcagcatctataccagtcagtcagatctct
tccatctcaggttcaaagctaagagaggtcttcgacaagatcagcatgctgctgtcaggg
cgactggtacagtctggtggaaagtccatttctgtcactcagcacccacaaggactggac
tttgtgtgtttcaagctggcagagaaatttgtgaaacaaggcgaagaagaggtggcatcg
catcatgaggcagctttccccattgccatcgtggcctctggaatttctgagctgtatccc
aaagtgggcgacctcatacttgcacatttgcacaagaagtgcccatatgcagttcccttt
tatcccccaatgaaggatggcatgtctttcgaggattaccagagggttttgggttaccgc
gtggaaggctctacggcggaatctcaggacagcttcatgaagaggatgtctggaatgatc
cggctgtatgctgctatgatacaactgcgatggccctacggcaacaagcaagcgccatgc
tcttttggactgaacttgggctggtgttggctcgcacaaatcctggacatggagcccctg
gcggatgttactgccacgctgctgtttgatttcttggaggtctgtggcaatgctctcgtg
aatcagtatcaagggcaattctggaagttaatcctacttattaaagaagagtattttaaa
aggattgaagctgtaactagcacgggacagatgggctccttaatgagactcaaacagttt
ctggagaaatgcatcggtcgccgggagattcctgtgccaaaaggactgatgagttcatca
ttctggaggtcctga
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