Polypterus senegalus (gray bichir): 120536054
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Entry
120536054 CDS
T08668
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04510
Focal adhesion
psex04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120536054 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120536054 (lamc3)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
DUF7630
Motif
Other DBs
NCBI-GeneID:
120536054
NCBI-ProteinID:
XP_039620329
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All DBs
Position
9:complement(176338449..176559361)
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AA seq
1563 aa
AA seq
DB search
MVNAAFWQLQLLLLQLSAVLGGMESCVDERGHPQRCLPKFENAAFNKTLMASNTCGAPAE
DYCRQTGPIRSCHRCDATEAALHHNATYLTDFHSDEDPTWWQSQSMFFGVQHPNSVNLTL
HLGKSYEISYIRLKFHTSRPESFAIYKRTHDGGPWIPYQFYSASCLKTYGKSNRGFIQVG
EDEQQATCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSPVLQEWVTATDLLVSLNRLN
TFGDEFFKDPKVLQAYYYAVSDFSVGGRCKCNGHASDCVLDERGWLVCDCQHNTAGVDCD
KCQPFYHDRPWARATADSANECLACNCSGRSEECVFDAELYRSQGHGGRCLNCRDNTDGP
NCERCRDGFYRTHPKDVCHPCNCSILGSTSLQCDSDGRCVCKANVTGEKCDRCQPGHHSL
SASGCRQCDCHPVGTTGFCSPLNGQCLCKKNVEGYTCDRCKPGTFNLDPENLAGCTECFC
HGHSAICQSAPGYSVYRIASNFTEGADGWLSERADGSESLLVWNEGGLHLNTSGEDQPGF
FKAPEKFLGDQQLSYGQPFSITFSGNGGHLIPRNVMLVIEGPAAMVTAHLPRPESVHSAG
TFVFRLHEDEVGIQEAPLSSQGFRQILSNLTAIKISGTRGSNGSTWLSEVSLLSATPGHF
PPALWVEECTCPQEYTGRLCEKCAPGYKREILNGGPSGLCVPCTCHQHGICHPDTGVCQC
WDNTTGPACERCLDGFYGDPLAGKPSDCQLCPCPGQSSCAIIPVSGELVCTNCPLGQRGV
RCQLCDDGFYGDPLGIHGVARPCQQCQCNGNVDPNAVGVCDHVGGGCLKCLHNTEGARCE
RCREGYYGNALHFYKCKPCNCSSAGSITLERGCHLETGQCPCLNLVAGRDCGQCEMGSFN
LQPGIGCQRCNCSLIGSLSPACHPISGQCQCQPGVEGLKCTVCRRGFFSFSSRGCRACNC
SPMGSVIMQCHNNGTCVCRQGFTGYKCDQCQVNFFNDRTTHQCEECPVCYGLVLHEADKL
KGKLQRVERLLQTYECRHWRGFDERLLQGDSPQSNSLEDLLAVQDARDAFVQQFTSLQGA
VVSVQTRLQMIHLKVNCSLGGSGRLCSSLAVVSRALGATQQELEKAVETLGGMVISGGLP
DESEPWAAYADESRLLAASHRQTAESIELVARTALRTSNETFILLAETLEDNSSAECFRE
LSQRLLTMQAAKKNITNTIGDLQSAATSVHEEVQEKISNGLHNVTSRETEELPCPDHLRN
ETLELEELLQSKDELINQALLDIKPHADLLSTERHRHAQLSHRAQQAQGKAEGALLKVRE
VETEAQSLVKELQEMKKGWHQKKTQTKMAMKKVQVVKDKILADTTRKTRLVKRQLLITGG
NSTAANVKAQGAQGTAVQAASDAQELLSQAKKIKRETSEMNSAILEELRAQEMRGTELRR
AMEERDEIAGAVLQAQDSMRSAALSLEQQSRVLRELLVQINSSQESADLESLLNETASQL
EVLRQKVQSEPLGLKITALEEAAKRQDEQIRQVEQDIVEILEEKLSLEDIVRNVPSGCTK
SPQ
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgcggcattctggcagctccagctcctgctgcttcagctctctgctgtttta
ggtggcatggagtcctgtgttgatgaacggggtcacccccagcggtgcctcccaaaattt
gagaatgctgctttcaataaaaccttgatggcgtccaacacctgcggcgcccctgcggag
gactactgcaggcagactggaccgatcagatcttgtcaccggtgtgatgccacagaggct
gctctccaccataatgccacctacctgaccgacttccacagtgatgaggaccccacctgg
tggcagagccagtccatgttttttggggtgcagcatcccaattcagtgaacctgaccctg
catttaggtaaatcctatgaaattagttacatccggctgaaatttcacacgagtcgtcca
gagagctttgccatttacaagcggactcacgacgggggtccctggatcccctaccagttc
tacagcgcgtcctgcttgaagacgtatggtaaaagcaaccgggggttcatccaagtcggg
gaggacgagcagcaggccacatgcactgatgagttcagcgacatctcacccctcaccgga
ggcaatgtggccttttcgactttggaaggtcgaccaagtgcctacaactttgaccaaagc
ccggtgctccaggaatgggtgaccgccacagatctcttggtttccttgaacaggctcaac
accttcggagacgagttcttcaaagatcccaaagtccttcaagcctactattacgctgtg
tcagacttctcagtgggtggcaggtgcaaatgcaacggccacgcgagtgactgtgtcctc
gatgaaagaggatggctggtctgcgactgtcagcacaacactgcaggtgtagactgtgac
aaatgtcagccattctaccacgacaggccctgggcacgggcaactgctgactcagctaac
gagtgcctggcctgcaactgcagtgggaggtccgaggagtgtgtgtttgacgctgagctg
taccggagccaaggacatggtggccgatgtttgaactgccgtgacaacactgatggtccc
aactgtgagcgctgccgggatggcttctaccgtacacaccccaaggacgtctgtcacccg
tgtaactgcagcattctgggatccacgagccttcagtgtgacagtgacggacgctgtgtc
tgcaaagccaacgtgactggagagaaatgtgaccgctgccagccgggacatcactcactc
tcggcgtccggctgccggcagtgtgactgccacccagtaggcaccacaggcttctgcagc
ccacttaatggacagtgcctctgtaagaagaacgtggagggctacacctgtgacagatgc
aagcctggaaccttcaacttggaccctgagaacctcgcgggctgcacagagtgcttctgc
catggacattcggccatctgccagtcggcaccggggtactctgtatacaggatcgcttca
aacttcacagaaggagcggatggctggttgagcgagcgggcagatgggagcgaatctctg
cttgtgtggaacgaaggtgggcttcatttaaacacaagtggagaagatcaacctggattc
ttcaaagcaccagaaaagtttctgggggaccagcagctgagctacgggcagcccttctcc
atcacattcagtggaaatggagggcacctcatcccaagaaatgtgatgctggtcattgag
ggcccagcagcaatggtgacggcacatcttcccaggccagagagtgtccattctgcaggg
acctttgtcttcagacttcatgaggacgaagttggcatacaggaggctcctttatcatct
cagggatttcgtcagatcctgtccaacctcacagcaataaaaataagtggcaccagagga
agtaatggtagcacctggctttctgaagtgagcctgctctccgccacccctggtcatttt
cctccagccctgtgggtagaggagtgcacttgtccccaggagtacaccggccggctgtgt
gaaaagtgcgcaccagggtataaacgggagatcctgaatggcggaccttctggcctctgc
gtgccatgtacctgccaccagcatgggatctgccaccctgacaccggagtctgccagtgc
tgggacaacaccaccgggcctgcctgtgagcgatgcttagacggcttctatggtgaccct
ttggcgggaaagccctctgactgccagctgtgcccatgtccaggccagtccagctgtgcc
attatacctgtgagtggggaactggtctgcaccaactgccctttgggacagcgaggtgtt
cgttgtcagctgtgtgatgacggtttctatggtgatccactgggaatccacggtgtggcc
aggccttgccagcagtgccagtgcaatgggaatgtggacccaaatgctgtcggagtgtgt
gaccacgtgggcggcggctgcctcaagtgtttgcacaacaccgagggcgcgcgctgtgag
cgctgtcgagaaggctactacgggaatgcgctacacttctacaagtgcaaaccttgtaac
tgcagctcagcggggtccatcactttggaaagaggctgccacctggagacgggacagtgc
ccttgcctgaatctggtggccggacgagattgtggtcagtgtgaaatgggctccttcaac
ctgcagcctgggatcggctgccagaggtgtaactgcagtctgattggctctttgtcgcct
gcctgccatcccatctccgggcaatgccagtgccagccaggagttgaaggcctgaagtgc
acagtttgccggagaggattcttcagcttctcttctcggggctgcagagcttgcaactgc
tctcctatgggctccgtcatcatgcagtgtcacaacaatggaacctgcgtgtgtcgccag
ggcttcacgggatacaagtgtgaccagtgccaggtcaacttcttcaacgacagaacaact
caccagtgtgaagagtgtcctgtgtgttatggcctggttctccatgaagcagataagctg
aaaggcaaactgcagcgagtggagcggctgctgcagacctacgagtgccgacactggaga
ggcttcgacgagcgcctgttgcagggggattcgccgcagagcaattcgctggaggatctg
ctggcggtgcaagatgccagggatgcttttgtgcagcagttcacaagcctgcagggggca
gtagtgagcgtgcagactcggctgcagatgatccacctgaaagtgaactgcagcctggga
ggaagtggtaggctctgcagctctctggcggtggtcagcagagctctgggtgccacgcaa
caagagctggagaaagcagtggagactctgggtggcatggtaatcagtgggggtcttccc
gatgagtctgagccatgggctgcatatgcagatgaatcccgcctgttagctgccagccac
cgtcaaactgcagaatccattgaacttgtagccagaacggctcttaggacatcgaacgag
accttcatcctgctggcagagaccctggaggacaactcgagtgcggaatgcttcagggag
ctgagccaacgacttctcacgatgcaagcagctaagaagaacatcacaaacaccattgga
gaccttcagtctgcagccacaagcgtccatgaagaagtgcaggagaagatcagcaatgga
cttcataatgtcaccagcagggaaactgaggaattaccatgtcctgatcacttgagaaac
gagacgctcgagctggaggagctccttcaatccaaagatgagctcatcaatcaagcactg
ctggatatcaagccacacgcagacctgctctccacagagaggcaccgtcacgcacagctg
tcccaccgtgcccagcaggctcaaggcaaagcagagggtgcgctgctgaaggtcagagag
gtggaaacagaagcccaaagcttggtgaaggagctgcaagaaatgaagaaaggatggcac
cagaagaaaacgcagacaaaaatggccatgaagaaggtgcaagtggtgaaggacaaaatc
ctggcggacacaacaaggaagaccaggctggtcaagcggcaactcctgattactggcggc
aactccacggccgccaatgtgaaagcgcagggggctcagggcacagccgtccaggcggca
tctgatgcacaggaacttctctctcaggcaaagaaaatcaagagagagacgagcgagatg
aactcggccatcctggaggagctgagagcccaggagatgagaggaacagagctgaggaga
gcaatggaggagagggacgagattgcaggagctgtgctgcaggcccaggacagcatgaga
tcggcagcgctctccttggagcagcaatcccgagtgctcagggagctcctggtacaaata
aactcgagccaggaaagcgcagatctggagagcctcctgaatgaaaccgctagccagctg
gaggtcctgcggcaaaaagtgcagagcgagccgctgggcttgaagatcaccgcgctggag
gaggcggcgaagcggcaggacgagcagataagacaagtcgagcaggacatcgtagagatc
ctggaggagaagctcagcctggaggacatcgtccgaaatgtgccgtccggctgcaccaag
tcgccccagtga
DBGET
integrated database retrieval system