Polypterus senegalus (gray bichir): 120536079
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Entry
120536079 CDS
T08668
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120536079 (gapvd1)
Membrane trafficking [BR:
psex04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120536079 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
120536079
NCBI-ProteinID:
XP_039620373
LinkDB
All DBs
Position
9:179596814..179690908
Genome browser
AA seq
1491 aa
AA seq
DB search
MVKSDIYTLAHHLKQERLYVNSEKQLLQRLNTDVLKTAEKLYRTAWIAKQQRINLDRLIL
TSTDASPAECCQHAKLLEDTQFVDGYKTLGFQETVYGEFLHRVRENPRLVASCLVAGEKL
NQEHMHSVIHTVFTSLYGNCIMQEDENYLLQVLRYLIEFGLKESEDPRRRLRSGTCAFSI
LFRLFSEGVYSAKLFLTATLHEPIMQLLVEDEDYLERDPNKVAERISGPQIEKLGGKGSD
IYKAKVQEMIESNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLDITE
VRAMCTDLLLVFFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMGSTDEGDP
RMKGSLSKFDKGCVAAFLDVIIGGRAVDTPPMSSMNLLDGLTRTVVYITHNQLLTLVDFA
RNVMSGDQLRDEDRIALENLMTNVPHVRGGKSNSLEMTPSNTPQLSPATTPANKKRLPIG
QQLAAITSWEPSANTLTAHIPLVTPFAASRSRSKSNIALEQQPDQEASSQESIQDLLPEE
VLVISLGTAPQISPGMMSENEVLNMHMGDGAQGEVPVDDTKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPG
PGSVLLDACTGSTISETTSEAWSVEVLPSDSEAPDVKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPEADDSGHGSHH
LTSPPSQADSLLAMFDPLSTCEGSLAPAVVRPKVHYARPPHPPPDPPIPELFPVIQEARL
PMFGPHGVLPVDLEQNKQRHSYPDRLVRSKSSDIVPASRRPTSDPSWNRRAPNEERDATV
GTSAAFVTGPSSSPSKDSLKGEAEERKDSDDEKSDRNKPWWKKRFVSAIPKVLYWTTESE
VTAPITFRKKDKQDKDREDQCPDESSSRLNAQAQAAAAEDILDKYRNAIKRASPSEVTTS
ATYEGPEAIAEGESIHDSPREEIIQNISADDLPDSASQTAQPLDSKFSFSDAKKKLRMSL
CSADSVVFPIMTHTTTRNGLPDHTDTEDNEIVCFLKVQLAEAINLQDKNLMAQIQETMRC
VSRFDSRTCRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANR
YFTTVCVRLLMKSMEKQMASFIEAFQRFTAADDKTASVEDFLRYLYGAMAQDTIWQNASE
DQLQDAQMAIERSVMNQIFKLAFYPNQDGDSLRDQVLQEHIQRLSKVVTANHKALQIPEV
YLKEAPWPSAQAEIRTMRAYKTPRDKLQCILRMCSTIMNLLSLANEDSVPGADDFVPVLV
FVLIKANPPCLLSTIQYINNFYASRMSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtcagacatttacactctggcccatcaccttaagcaggagcgcctgtatgtg
aactctgagaaacagctgctgcagcgtctcaatacagatgttttgaaaactgctgaaaag
ctttaccgaactgcatggattgctaagcagcagagaatcaaccttgacaggcttatcttg
accagcactgatgcttcccctgcagaatgttgccagcatgctaaactcttggaggatact
cagtttgtcgatggctataaaacacttggcttccaggagacagtttatggggagttcctc
cacagggtgagggaaaatcctcgcttggtggcttcctgtttggtggcgggtgagaagctc
aaccaggagcatatgcatagtgtaattcacactgtctttacttcactgtatgggaactgt
atcatgcaagaagatgagaactatctcctacaggtactgcgctacctgattgaatttggg
ctgaaagagagtgaagatccacgacggcgcttgaggagtggtacttgtgctttcagcatc
ctatttaggctgttttctgaaggtgtatactctgcaaagctcttcttaacagccaccttg
catgagcctataatgcagctgcttgtggaagatgaagattacttggagagagaccccaac
aaagtggcagagcgtatctctggtcctcaaatagagaagcttggtgggaaaggatctgac
atttataaggccaaagtccaagagatgattgagtcaaatgaggcaaagcttgtggcactt
gtaaacaagtttattggctacttgaaacaaaacacgtattgctttcctcacagcctacga
tggattgtgtctcaaatgtacaaaactctgtcctgtgtagaaaggttggatattacagaa
gtgcgtgcaatgtgtactgatctcctgctggttttctttatctgtcctgctattgtcaac
ccagagcagtatggaatcatttcagatgccccaattaacgaggtggccaggtttaatctg
atgcaggtgggccagctgttgcagcagttagctatgggcagcacagatgaaggagaccca
cgcatgaaaggaagcctttccaagtttgataaaggttgtgtggcagcttttctggatgtg
atcattggtggtcgtgcagtagacactcctccaatgtcctctatgaacctccttgatggg
ttgacaaggactgtggtttacatcactcacaatcaactcctcacattggtggattttgct
agaaatgtgatgtctggtgatcagctgcgtgatgaagatcgaattgctctagagaacttg
atgacaaatgtacctcatgtccgaggtgggaaaagcaacagcctggaaatgacaccgtcc
aacactccacaactatctccagccaccacacctgccaacaagaaaagattgcccatagga
caacagttagctgcaattaccagctgggaaccttctgccaacactctgactgcacatata
cccttagtaacaccatttgcagcctcacggagcagaagcaaatccaacattgccttggag
cagcaaccagaccaagaggctagctctcaggaatcaatccaagaccttttgccagaggaa
gtccttgttatctctttgggcacagcaccacaaatttctcctggaatgatgtcagaaaat
gaggtgttaaacatgcacatgggtgatggagcacaaggcgaggttccagtggatgacacc
aaacttcatggcaaaccagacaagacactgcgtttctcattgtgcagtgacaacctagaa
ggaatatctgaaggcccttcaaaccgatcaaattctgtatcttcattggatcttgaagga
gagtctgtttcagaattaggagcgggtccttcaggaagcaatggtgtggaagcattacag
cttctggaacatgagcaagccaccacacaagacaatctggatgacaagctgcgaaaattt
gaaataagggacatgatgggtctgacagacgacagagatatttctgagactgtaagtgaa
acatggagtacagatgttttgggcagcgactttgaccccaacatcgacgaagatagacta
caggaaattgcaggtgctgctgctgaaaacatgttgggcagtctgttatgcttgccaggc
cctggttcagtgcttcttgatgcatgcacgggatccactatatcagagaccaccagtgaa
gcctggagtgtggaagtcttgcccagtgattctgaagctccagatgtgaaacaggaggaa
cgcctgcaagaacttgaaagttgctccggattgggtagtacttcagatgacacggatgtg
cgcgaagttagttctcggcctagcacacctggtctcagtgttgtttcagggataagtgct
acatcagaggacattcccaataaaattgaagatctgaggtcagagtgcagttctgatttt
ggaggaaaggattctgtaacgagtcctgaagcagatgattctggacatggctctcaccac
ttgacatctcctccttcacaagctgactctttgcttgctatgtttgaccccctttctaca
tgtgaagggtcattagcacctgcagttgtacgccccaaggttcattatgcccgacctcct
caccctcctccagatcccccaattcctgaactgtttcctgtaatccaagaggctagattg
cccatgtttggcccacatggtgtgctgccagttgacttggagcagaacaaacaacgtcat
tcctatccagacagactagtgaggagcaagagttcagacatagtgcctgcttcccgaagg
cccaccagtgaccccagctggaaccggcgtgctcccaatgaagagagagacgctacagta
ggaacttctgctgcatttgttacagggccatcctcttcccctagtaaagattcactaaaa
ggagaggcagaagagaggaaagacagtgatgatgaaaaatcagacaggaataaaccttgg
tggaaaaagcgctttgtctctgccattccaaaagtgctatattggactacagaaagtgaa
gttacagcacctattacattcaggaaaaaggacaaacaagacaaagacagggaagatcaa
tgtcctgatgagtcttcatcccgtttgaatgcccaagcccaggctgctgctgctgaggat
attctagacaaatacaggaatgccatcaagagggcaagccccagtgaagtaacaacttca
gcaacttatgaaggacctgaagcaattgctgaaggagaaagcatccatgactcacctaga
gaagaaattatacaaaacatctctgcagatgacttaccagattctgcaagccagacagca
cagccattagattcgaagttctccttcagtgatgccaagaagaaactaaggatgtcactt
tgctctgctgattcagtcgtctttcctataatgactcacacaacaacaagaaatggtcta
cctgaccatacagatactgaagataatgagattgtctgtttcctgaaagtccagcttgca
gaagctataaaccttcaggacaaaaacctcatggctcagatccaggagacaatgcgctgt
gtcagtcggtttgatagtcgaacttgtcggaaactgctggctgccattgcagaagattac
agaaagcgggcaccctatattgcttacttgactcgatgtcgccagggactccagacctca
caggctcatttggaaagactcctgcagagagtactgcgggataaggaggtggccaaccga
tacttcaccacagtctgtgtcagactactaatgaagagtatggagaaacaaatggcaagc
tttattgaagccttccaaaggttcacagctgctgatgacaaaactgcttcagtggaagat
ttcttgcgttatttgtatggagccatggctcaagacactatttggcaaaatgctagtgaa
gatcaactgcaggatgcacaaatggctattgagaggagtgttatgaatcaaatattcaaa
cttgccttttacccaaaccaagatggcgatagtttacgagatcaagttttgcaggaacac
attcagcgcctgtctaaagttgtgactgctaatcataaggctctacagatcccagaggtg
tatttaaaagaagccccttggccatctgcacaggcagaaattcgaacgatgcgtgcttac
aagacaccacgggataagctgcaatgtatccttcggatgtgttcaactatcatgaatctt
ctgagcctagccaatgaggactctgtacctggagcagacgattttgttcctgtgttggtg
tttgtcttaattaaggctaaccctccctgcctgctgtccaccatccagtacatcaataat
ttttatgccagccggatgagcggagaggaatcttattggtggatgcagttcacagcagcc
gttgaattcattaaaaccattgacgatcgcaagtga
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integrated database retrieval system
