Polypterus senegalus (gray bichir): 120536333
Help
Entry
120536333 CDS
T08668
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120536333 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120536333 (rubcn)
Membrane trafficking [BR:
psex04131
]
Autophagy
Other autophagy associated proteins
Others
120536333 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
120536333
NCBI-ProteinID:
XP_039620596
LinkDB
All DBs
Position
1:complement(188279209..188309263)
Genome browser
AA seq
936 aa
AA seq
DB search
MIGHWDTVPGKTYVPQSGRRPLHRGELFMETYEEDEERRRERWKLLNSLKTTVEGLLSTN
NPNVWSRYGGLERLCKDMNNILSHGLIQDQVYCRQADYWAFVNCARLEQFLDVNEGHKTP
HRAYVWLHHSLQFHSLSAQLRPLLQQTGHTRKFYTDGAFLLSPPHVMAMFQCLEAVEQNN
AKLLALIDTSLLTLKIQSPLFFPMPYIPVSSYSSFCDSSAKILPGAGGNKSAIPPPLLVP
EKGSFTLPREIEDTRDDHSTELDDGPEYLAIGNLGCRRRSSVSSSTESTASLKEEETMPT
TISNRTLSARRSSFSEGQRMERQAGFRRSHTRSHSDTGLAQGRLQQGGHRNITIIIEDPV
AESYPEVCGAFSSHSSEVSTPSSLYLESEVSQYSSLTDGMFRRPSEGQSLISYLSEQDFG
SCADLEKENAHFSISESLIAAIELMKCNLLKRNDPSLEGEGEDDEENDLEIQELKQKIRL
RRQQIRSNRQQKITLDPSFTTPESGNSRHNSLDSLQLSDSGSVEEVEEIEIRDGNDGCNL
IQMSNNGLSLSLASLFSDADITKSGRSVSLPGSSVISHLFLQSNSAESVAMGLLRQFEGM
QLPAASELDWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYRLRIRVRGNLEWAPPRPQI
IFNIHPAPKRKVVVAKQNHRCAGCGIRIEPDYIKRLRYCEYLGKYFCQCCHDNNQSVVPS
RILRKWDFSKYYVSNFSKDLLTKIWGDPLFNVEDINSALYRKVKALDQVKHLRVQLVRMK
SLLKTCRLAEDLLDQFDQEPGHLTEDLHLYSLSDLVAVRKGELAPRLRDLVQRGAAHVHR
CELCQAKGFICEFCGNDKDIVFPFELQKCRCCEECKACYHKSCFRYDQECPKCRRLALRR
EMLARQNMEVQTSEDEEEDSGQSSKGINGSQEQDIN
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgattgggcactgggatacggttcccggaaaaacatatgtgccgcagtcagggcgaagg
ccgctacatcgcggtgaattgtttatggagacgtacgaggaggacgaggaacgcaggagg
gagcgctggaagcttctcaacagcttgaagactactgttgagggactgctgtctactaac
aaccccaatgtctggtctaggtatggtggcctggagcggctatgcaaggacatgaacaac
atcttgagccatgggctcattcaagatcaggtttactgcaggcaagctgattactgggca
tttgtcaactgtgcccgcttggaacagtttctggatgtgaatgaaggtcacaagactcca
cacagggcctatgtgtggctccaccacagcttacagtttcacagtctttctgcacagctg
cgacccctgttgcaacaaacgggacatacccgcaaattctacacagatggggcattcctc
ctgagtccccctcatgtgatggcaatgttccagtgtttggaggcagttgagcagaacaat
gccaagttgctagcccttattgatactagcctgctgacattgaagatacaatcgcctctg
ttctttcccatgccctacatcccagtctcctcctatagcagcttctgtgacagctctgcc
aagatccttcctggtgcaggtggtaacaagtctgccattcctcctcctctgctggtgcca
gagaagggaagctttaccctcccacgagagatagaagacactagggatgatcattccaca
gaactggatgatgggccagaatacttggcgattgggaacctcgggtgccggcgccgctca
tctgtcagcagtagcacggaaagcacagctagtttgaaggaagaagagactatgcccact
actatctccaacagaacgctttctgcccgtcgttccagcttctcagaggggcaaaggatg
gaacggcaagcaggttttagacgaagccatactcgctcacactcagacacgggcctcgcc
cagggtcgattacaacaaggaggccataggaacatcaccattattattgaggaccctgta
gcagaatcataccctgaggtgtgtggtgcattctccagtcatagtagtgaggttagcaca
ccaagttccctgtacttggagtctgaggtatcccaatacagcagtctaacagatggtatg
tttcgcaggccatcagaaggccagtcacttatcagctacctttcagagcaggattttggg
agctgtgctgatctggaaaaggaaaatgctcattttagcatctctgagtccttaattgcg
gctattgagctcatgaagtgcaatttgttaaagcgcaatgacccatcccttgaaggtgaa
ggtgaggatgatgaggagaatgaccttgagatccaagaactgaaacagaaaatacgccta
cgccgacagcagatcagaagtaaccgacagcaaaagataacacttgatccatcattcacc
actccagaaagtggaaactcaaggcacaactccctggattccttgcagctttctgattct
ggttctgtggaagaagtggaggaaatagaaatcagagatggtaatgatggatgtaacctg
attcaaatgtctaacaacggactctcactgtccctggcctctctgttctcagatgctgac
attacaaagtctggtcgcagtgtgtcccttcctggctcatcagttatatcccacttgttc
ctgcagtctaattctgctgagtccgtggctatggggttgctacgacagtttgaaggaatg
cagctccctgcagcctccgaacttgactggcttgtccccgagcatgacgcccctcagaag
ctgctacctattccagattctctacccatttctcctgatgatggtgagcatgcagatatc
tacagattaaggatccgtgtccgagggaacttagagtgggcccccccacgcccacagatc
atcttcaacattcaccctgctcccaagagaaaagtggttgtggcaaagcagaatcacaga
tgtgctgggtgtggtatccgcattgagccagattacatcaaacgtctgcgttattgtgaa
tatctgggaaaatacttttgccagtgctgccatgacaacaatcagtcagtggttccaagc
cgtattttacgcaagtgggatttcagcaagtattatgtaagcaatttctccaaagatcta
ctaacaaaaatctggggtgaccctctgtttaatgttgaggacatcaatagtgctttgtat
aggaaagtcaaggcactggaccaagtgaagcatttgagggtacagttggttcggatgaag
agcctgctcaaaacatgtcgtctggccgaggacttgttagatcaatttgaccaagaacct
ggtcacctaacagaagatctacacctatactcattgagtgatctggtggctgttcgaaaa
ggagagttggcaccccgtctccgagatcttgtccagagaggtgctgcacatgtccacaga
tgtgagctttgccaagccaaaggtttcatttgtgagttctgtgggaatgacaaggacatt
gttttcccgtttgagctacagaagtgccgatgttgtgaggaatgcaaggcctgctatcac
aagagctgcttccgctatgaccaggagtgtcccaagtgccgacgtctagcactgcgcagg
gaaatgctggctcgtcagaatatggaggtgcaaacttctgaagatgaggaagaggatagt
ggacaaagtagcaaaggaattaatggctctcaggagcaggacataaactga
DBGET
integrated database retrieval system
