Polypterus senegalus (gray bichir): 120536358
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Entry
120536358 CDS
T08668
Name
(RefSeq) CPD photolyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120536358
Enzymes [BR:
psex01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
120536358
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
120536358
Prokaryotic type
120536358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
DUF5994
Motif
Other DBs
NCBI-GeneID:
120536358
NCBI-ProteinID:
XP_039620621
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All DBs
Position
1:complement(188220507..188239805)
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AA seq
565 aa
AA seq
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MSNNTTFRCCLQSCRKVQSLSPTTLYTFAASLYCATSKIIEMQKKSSTKDSVKQLKAKKS
KLLEDDHHDDYACKRQKLPEVTGGGKRLSDAICISRRETASSVAEFKFNKKRVRILSKTE
DIVDGSDGILYWMSRDQRVQDNWALLFAQRLALKQKLPLHVCFCLVPRFLEATIRHFGFM
LHGLQEVAKECTELDISFHLLIGYAKDVLPEFVKLNHIGAVVTDFSPLRVPLQWLQDVKD
RLPESIPFAQVDAHNIVPCWVVSDKQEYAARTIRKKIHDKLPEFLTEFPPVVLHPHCTKI
KTKEVDWEKARASLEVDHTVKEVDWAKPGTQGGMAVLASFISERLKLYSSDRNDPNKEAL
SNLSPWFHFGQVAVQRAVLEVQKFRSKYRESVESFIEESVVRRELSDNFCFYNPRYDSLD
GAFEWARKTLEDHAKDKRTHLYSRAELEEGRTHDPLWNAAQLQMVHEGKMHGFLRMYWAK
KILEWTHSPAEALEISIYLNDRYELDGRDPNGYVGCMWSICGTHDQGWSERAVFGKIRYM
NYAGCKRKFDVNQFECTYNYKKFTP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaataccacattcaggtgctgtctgcagtcttgccggaaagttcagtccttg
tcaccaacaacattgtatacttttgcagcctcgctatactgtgcaacatcaaagataata
gagatgcagaaaaaaagttctacaaaagattcagtgaaacagttgaaggctaaaaagagc
aagctcctagaggatgatcaccatgatgattatgcatgcaagaggcagaagctgcctgag
gtgactggaggaggcaaaaggttgtcagatgccatatgtatttcccgcagggaaactgcc
tcatcagttgcagagttcaaattcaacaagaaacgggtccggattttgtccaagacggag
gatattgtagatggatcagatggtatcctttactggatgtccagggatcagcgggtacaa
gataactgggcattgctgtttgcacagcgtctggctcttaagcagaagctacccctccat
gtgtgtttctgtttggtaccacgcttccttgaggcaaccattcgccactttggctttatg
ctacatggcctacaggaagtggcaaaggaatgtactgagttggacatctccttccatctg
ttaattggttatgcaaaagatgttttgccagagtttgtgaagttaaaccacattggagca
gttgtcaccgacttctccccattgcgggtcccactacagtggctgcaagatgttaaagat
agactgccagaaagtattccctttgcacaggttgatgcccataatattgtaccttgctgg
gttgtctcagacaagcaagaatatgcagcaaggactatccgcaaaaagattcatgataaa
ctgcctgagtttctgacagagtttccccctgtggtgctacatcctcattgcaccaagatc
aaaactaaggaggtggactgggagaaagcacgtgcctctttggaagtagaccacactgtg
aaggaggtggactgggctaagcctggaactcaaggaggcatggctgttcttgcgtcattc
atttcagagagactcaagctctattcatctgaccgcaatgatcctaacaaagaagcactc
agcaatctttcaccctggtttcattttggccaggtagcagtgcagcgtgcagtgcttgag
gtgcagaaattccgtagtaaatatcgtgagtctgttgagagcttcattgaggaatcagta
gtaaggagggaactgtctgacaacttctgcttctacaatcctagatatgactccttggat
ggggcctttgagtgggccagaaagaccctcgaggaccacgccaaggacaagcgtactcac
ctgtattcacgtgcagaactagaggaaggcagaactcatgacccactttggaatgcagca
cagctgcagatggttcatgaagggaaaatgcatggcttcctgagaatgtactgggcaaaa
aagatactggagtggacccactccccagcagaggccttagaaatttccatttacttgaat
gacagatatgagctagatggacgagacccaaatggatatgttgggtgtatgtggtcaatc
tgtggaactcatgatcaagggtggtctgaaagagcagtgtttgggaagattcgatacatg
aattatgcagggtgtaagaggaagtttgatgtcaaccagtttgagtgtacatacaactat
aagaaattcactccctga
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