Polypterus senegalus (gray bichir): 120536918
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Entry
120536918 CDS
T08668
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120536918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120536918
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120536918
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_NLRC3
LRR_6
LRR_TMOD-LMOD
LRR_CARMIL
LRR_4
LRR_8
LRR_NLRC4
MAM33
CENP-B_dimeris
FAM176
Motif
Other DBs
NCBI-GeneID:
120536918
NCBI-ProteinID:
XP_039621425
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Position
10:21966708..21993027
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AA seq
570 aa
AA seq
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MASEDISKLADSLAKTQVGDGELSFKGRGLKLNDAEAAEEMVKEIEAFSGLQALRLEGNT
VGVQAAEAIAKALRNKKDLEKCYWSDMFTGRLRSEIPPALISLGEALMSAGACLTELDLS
DNAFGPDGVRGIEDLLKSTSCFTLRELRLNNCGMGVGGGKILAAALIECHQRSSEQGTPL
RLKVFVAGRNRLESEGATALSRAFKLMGSLEEIHMPQNGITHSGVTALANALQDNPHLRV
INLNDNTFTSKGAKSMAQGLKDLRNLEVINFGDCLIRSEGAIALAETLKEGLPSLKELNL
SFGEIAEEAALKVASAVQHKSQLEKLDLNGNCLGEEGCESLKELMKSFNLDEILGSLSDD
DGEPDEDEEKVEEEEEEEEEEEEEEEEEDRNILSSPAPQTSTTMPCTSVVDVSAFLGFPT
AEKLMKLGPNRAMLIQQEVDVTDADKTTQVFLKIASLYKDGDNIKELVLTCVDTLLRKAF
NSPSFQKEQFMSSLLILLGLIKQSEDKLKPVHVVPGHLLTLEHVVRQDYFPKQQISILLV
FFSRPNQIMESCSSAHLTLKETLENLDPGS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgaagatatttccaaattggctgactcactggccaaaacacaagttggagat
ggggagctaagtttcaagggaagagggctgaagctaaacgatgcagaagctgcggaagaa
atggtaaaagaaattgaggcatttagtgggctacaggcactgagacttgaaggaaacaca
gttggtgtacaagctgctgaagccattgcaaaagctctacgtaataagaaagatcttgag
aaatgctactggagtgacatgttcacaggtcgccttcggtctgagatcccccctgctctg
atctcacttggtgaggcactcatgagtgcaggagcatgtctcacagagctggacctcagt
gacaatgcctttgggccagatggtgtccgtggcattgaagatctgcttaagagcacttcc
tgcttcacactgcgtgaactacgcctcaacaactgtggaatgggtgttggaggaggcaag
attctggctgcagcccttatagagtgtcaccagcgttctagtgaacaaggcaccccactt
agactgaaagtgtttgttgcaggcagaaaccggctggagagtgagggtgctacagccctt
tctcgtgcttttaagctgatgggcagcctcgaggaaatccatatgcctcaaaatgggatc
actcactctggtgtgacagccttagcaaatgctctgcaggacaaccctcatcttcgtgtg
attaaccttaatgataacactttcaccagcaagggagcaaaatcaatggcacagggatta
aaagacctccgaaatctggaagtgatcaattttggggactgtctgatacgatctgagggg
gctattgcgcttgcagaaactttgaaggaaggtcttccaagccttaaggagctgaacctg
tcttttggagaaattgctgaggaggctgctcttaaagttgccagtgctgtgcagcacaaa
tcacaactggagaagctagatctgaatggcaactgtctgggagaggagggctgtgaatct
ctgaaggagttaatgaaatcatttaacttggatgagattttgggatcactcagtgatgat
gatggtgaaccagatgaagatgaagagaaggtggaggaggaagaggaagaggaagaagaa
gaggaagaggaggaggaggaggaagacagaaatattctatcttctccagcgccacagact
tctactacaatgccctgtacatctgttgtagatgtttcagccttcttgggttttccaact
gcagagaaactgatgaagctgggtcccaatcgagcaatgctcattcaacaggaggtggat
gttacagatgctgataaaactacacaggtattcctgaagatagcgtctttgtacaaggat
ggcgacaacatcaaagagttggtcctgacgtgtgttgatacattattgagaaaagcattc
aactccccatcattccaaaaagaacagtttatgtccagtctacttattcttttgggtttg
atcaagcagagtgaagacaaactaaagccggttcatgttgttccgggacatctcctaacg
ttggagcacgtagtgaggcaagattattttcccaaacagcaaatctctatcctcctagtc
tttttttctaggcctaaccagatcatggagtcctgctctagtgcccaccttaccttgaaa
gaaacccttgaaaatttggacccaggttcctga
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