Polypterus senegalus (gray bichir): 120536993
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Entry
120536993 CDS
T08668
Symbol
si:ch211-141o9.10
Name
(RefSeq) probable endonuclease 4
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120536993 (si:ch211-141o9.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120536993 (si:ch211-141o9.10)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120536993 (si:ch211-141o9.10)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120536993 (si:ch211-141o9.10)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
120536993
NCBI-ProteinID:
XP_039621514
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All DBs
Position
10:complement(29214379..29237740)
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AA seq
332 aa
AA seq
DB search
MSDRQGAKPKRRRSSSLSRKSRTVQKSKRRRSSSGEEGPVKKKPAKGKGSKRLVGGHMSI
AGGIWKAVHDSVTVGGTAFAMFLGSQRTWKSKPIDERAAERFRQACVEYGFHPSVILPHG
SYLMNCGSPRRDIFEKSRSMLIDELRRCEQLGLTMFNFHPGSTLNEISVEECLERIADSI
NYAHQHTNKVMTVIENMCCQGNTVGGRFSEIKGIIKLVRNKKRIGVCLDTCHAFAAGYDL
SARGGVKKMLDEFDAQVGMKYLVAIHLNDSKGMLECHKDRHENIGYGHIGLDGFRQIMNE
PRLRKIPMILETPHRPNFDYEKEIQLLRSLCN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatagacaaggagccaaacccaagcgaaggagaagtagttcattgtctagaaag
agcaggactgtgcagaagagtaaaagacgtcgttcatcttcaggtgaagaaggacctgtg
aagaaaaagcccgcaaaagggaaaggaagtaaaaggcttgtaggtggtcatatgtctata
gcaggtggtatttggaaagcagttcatgattctgtgacagtgggaggcactgcatttgcc
atgttccttggctctcagcgaacatggaaaagcaaacccattgatgaaagggcagcagaa
aggttccgccaagcctgtgttgaatatggatttcatcccagtgtgatcctgccacatggc
tcctatctaatgaattgtggttctcctaggagggatatttttgaaaaaagcagatcaatg
ctgattgatgagctgcgacgctgtgaacaacttggcctgactatgtttaactttcaccct
ggatcaactctgaatgaaatcagtgtggaggagtgtcttgaaagaatagcagactcaatt
aactatgcccaccagcacaccaataaggtcatgactgtaattgaaaatatgtgctgtcaa
ggaaacacagttgggggaagattttcagaaataaaaggaattattaaattggtgagaaac
aaaaagaggattggggtctgtttagatacatgccatgcatttgcagcagggtatgaccta
tcggcaaggggtggagtgaagaaaatgctagatgagtttgatgcacaagttggcatgaag
tacctcgtggccattcatctaaatgactctaaaggaatgttggagtgtcacaaagaccgc
cacgagaacattggttatggacatattggcttagatgggttccgtcagattatgaatgag
ccccgtttacgcaaaattccaatgattctcgagacaccccacaggcccaactttgattat
gaaaaggagattcaactactgcgttctctttgtaactga
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