Polypterus senegalus (gray bichir): 120537006
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Entry
120537006 CDS
T08668
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psex03041
]
120537006
Enzymes [BR:
psex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120537006
Spliceosome [BR:
psex03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120537006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120537006
NCBI-ProteinID:
XP_039621530
LinkDB
All DBs
Position
10:29707148..29729011
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AA seq
694 aa
AA seq
DB search
MRGGSYGDRDRDRGRDRGPRFGSNRGGAGPPPNKKFGNPGERLRKKKWDLEELPKFEKNF
YAEHPEVARMTPFEVDEYRRKKEITVRGSGCPKPIVSFHQAQFPQYVMDVLLEQNFTEPT
SIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE
LAQQVQQVAYDYGKTSRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLREYV
QINVGALELSANHNILQIVDVCQESEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDDLT
RRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDY
PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEANQAINPKLLQLVDTG
RGGGGGRSRYRNVSNSNNPNLMYQEECDRRMRGGMNKDGRGNMGGGNFRDHRGGGSANRD
HNGADRSYGRDRGRDHRGNYATGANATNYGGSGGGHNNQGYENQYQGYGPGGGAGNQGGY
GRGGQQGVSGGLGGGNIGGGGGNPDQTPQQQQPPQSQYGNMGGRPGQGGPSGPPQPLMAQ
QFAPPQPPPMMGYMGQASFQYAPPPPPPPPPPRK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcggatcgtatggagatcgcgaccgggaccgcggaagggacagaggccctcgc
tttgggtcaaaccgtggtggagctggtcctcctcccaataagaagtttgggaatcctggt
gagagactgcgcaaaaagaaatgggatttagaggaacttcctaaatttgagaagaacttt
tatgctgaacaccctgaagtagcacgaatgacaccatttgaagttgatgaatatcgcagg
aaaaaagagatcactgtccgtggatctggatgtcccaaaccaattgtcagttttcaccaa
gcacagtttccacaatacgtaatggatgtgcttctagaacagaactttaccgagcctact
tccattcaagcgcagggcttccctttggccctaagtggtagagacatggtgggcattgca
caaacgggctctgggaagacactggcgtacctgttgccagctattgtccatattaatcat
cagccttacctggaacgaggagatggccctatttgtcttgtgttagctccaacaagagaa
ctggctcaacaagtgcagcaggtggcttatgactatggaaaaacatcacgtatcaagagt
acttgtatatacgggggtgcaccaaagggtcctcaaataagggatcttgaacgaggtgta
gaaatatgtattgccactcctggtcgtcttatagatttccttgaggccggaaagactaat
ctgagacgctgcacatatttggtcctggatgaagctgacaggatgttagatatgggcttt
gaacctcaaattcgcaaaatagttgaccaaatcaggccggaccgtcagactcttatgtgg
agtgcaacctggccgaaagaagttcgacagcttgctgaagactttttaagagagtatgtc
cagataaatgttggtgcactagagctgagtgctaaccacaacattctgcagattgttgac
gtttgtcaagagagtgaaaaagacaacaaacttatacagttgatggaggagataatggcg
gagaaagaaaataaaacaattatctttgtggaaaccaaaaagagatgtgatgaccttaca
cgaagaatgcgaagagatgggtggcctgcaatgtgtatacatggagataaaagccagcct
gaacgtgactgggtcttaaatgagtttcgtagtggaaaagctccaatccttattgcaaca
gatgtggcttcacgtggattagatgtggaagatgtaaagtttgtgataaactacgattac
cctaactcctcagaagactatgtacatcgtattggccgaacagcccgtagcacaaacaag
ggcacggcctataccttcttcactcctggcaacttgagacaggctagagagcttatccgg
gttttggaagaagccaatcaggctatcaatcccaaactgttgcagctagtggacactggc
agaggaggtggaggtggtcgttcacgatatcgtaatgtttcaaattcaaacaatccaaac
ttgatgtaccaggaagaatgtgatcgtcgtatgagaggaggaatgaacaaagatggtcgg
ggcaacatgggaggcggtaacttcagagaccacaggggagggggcagtgccaacagggac
cacaatggagctgatcgctcatatggcagagacagaggcagagatcacagagggaactat
gccacaggagcaaatgccacaaactatgggggatcaggaggaggccataacaatcaagga
tatgaaaatcaataccaaggttatggtcctggtggcggtgctggaaaccaaggtggttat
ggtagaggtgggcagcagggtgtttctggtggccttggtggcggcaacattggaggtggt
ggtggcaatccagatcagacaccacaacaacagcagcctccacagtctcagtatggtaat
atgggtggtagaccaggtcagggaggtccatctggtccgcctcagcctctcatggcccaa
cagttcgctccacctcagccgcctccaatgatgggatatatgggacaggcttcttttcaa
tacgcacccccacctcctcctcccccacctccaccaagaaaataa
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